Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00111 ATGAGTAATTTCAATGGCAGAAGACCTTTTGATTTGGAGGGTGGTAGCAGCAATTCTGGGGAGGTAGAAGACGAAGATCTGTCTTCCTCCAATCCATTTGACATTGCGAGAACAAAGAATGCTTCGTTGAAGCGTCTCAAACGCTGGAGACAAGCTGCACTCGTGCTTAACGCTTCACGGCGATTTCGATATACTTTAGACTTGAAAAAGGAAGAAGAGAAAAGAGAAGCTATAAGGAAGATTAGAGCACATGCACAGGCTATACTTGCTGCCTATCGCTTCAAATTGGCTGGAGATCGTCTAATAGGAGGAAGTACAACACCCTCCATCCCAAACGGTGTTTACGAAGTAGGACAAGAGCAACTAGCTGTGTTGGTCAAAGATCATAATCTATCTGCTCTGCAGCAACTTGGAGGGGTGAAAGGTGTATCCAATTCATTACAAACAAACTTGGAGAAAGGTATTCACGGGGATGATGAAGATTTACTAAAACGGAGAAAAGAATTTGGATCAAACACATATCCTCAAAAAAAAGGAAGGAGCTTTTGGAGGTTTCTTTGGGAAGCATGGCAAGATCTCACGCTGATAATATTGATAATAGCTGCAGTGGCTTCTTTGGGACTAGGCATAAAGAGTGAAGGTATCAAGGAAGGGTGGTATGATGGTGGAAGCATTTGTTTAGCAGTTATCATTGTCATTGTTGTGACAGCCATTAGTGATTATCGACAATCTTTGCAGTTCCAGAATCTAAATGAGGAGAAGAGAAATATACACCTGGAGGTTATCAGAGGAGGTAGAAGAGTGGAGGTTTCTATATATGATGTTGTTGTTGGAGATGTGATACCTTTGAACATTGGGGATCAGGTTCCTGCTGATGGGATTTTAATATCTGGACACTGTCTTGCAATTGATGAGTCAAGCATGACTGGCGAGAGCAAGATCGTTCATAAACATGCAAAAGAACCGTTTCTGTTATCGGGCTGCAAAGTAGCGGATGGAAGTGGCACTATGCTGGTTACAAGCGTTGGCAGTAATACTGAATGGGGATTGCTGATGGCTAGCATTTCTGATGACACGGGTGAGGAAACACCCTTGCAGGTCCGTTTGAATGGAGTTGCTACTTTTATTGGTATTGTCGGACTAACTGTAGCTTTTGCTGTCTTGATTGTTCTATTTATCAGATATTTTACTGGACACACCACAAATGCAGAAGGGCAAGTTCAATTTATTGCTGGCCAGACAAAGGCTGGCAAGGCCATTGATGGGGCCATTAAAATCATTACTGTTGCGGTCACAATTGTAGTTGTTGCAGTTCCGGAAGGGCTTCCCTTGGCTGTTACCTTAACTCTTGCCTATTCAATGAGAAAGATGATGGCTGACAAAGCATTGGTGCGAAGACTTTCTGCATGTGAGACTATGGGATCTGCTACAACTATATGTAGTGATAAGACTGGAACTTTGACAATGAATGAGATGACCATTGTTGAAGCTTATGTTGGTGGAAAGAAAATTGATCCTCCAGAAATCAAGTCTGAACTTTCATCCACTAGTTTATCTATACTTCTTGAAGGAATTGCTCAGAATACGAATGGCAGTATTTATTTTCCCGAGGGCGGGGGAGATGTTGAGGTTTCTGGATCACCAACAGAAAAAGCTATTCTCTCTTGGGGGATTAAGCTCGGGATGAGTTTTGAACTCATCAGATCAGAATCTTCAATTGTTCATGTTTTTCCATTCAACTCAGAGAAAAAGCGAGGTGGTGTTGCTGTGAGATTGCCCGGCTCTCAAGCCCACATACATTGGAAAGGTGCTGCTGAGATAGTCCTGGCCTCATGCACTCAACACATTGACCTTGATGGTCGTTTGGTGCCTATGGATGAAGATGAGAAAATGTTTTTCAAAAAAGCTATTGAGGATATGGCTGCTCGTACTCTGCGTTGTGTAGCCATTGCATATAGATCTTATGATATTGAGAAAATTCCCGCTGATGAAGAACAACTAACTAAGTGGGTGCTACCAGAGGATGATCTTGTGTTGTTGGCTATTGTTGGTATAAAGGACCCTTGTCGACCTGGAGTGAAAGATGCAGTACATCTTTGTCAAATTGCTGGTGTCAAGGTACGTATGGTAACTGGTGACAACATTCAAACTGCCAAAGCTATTGCTTTAGAATGTGGCATACTTAGTTCAGCTGCAGATATTTACGAACCCAATATTATGGAGGGAAAAGCCTTTCGCGAACTATCTGATGAACAAAGAGAAGAAATTGCTGAAAAGATATCAGTGATGGGACGGTCCTCCCCCAATGATAAGCTTCTTCTTGTTCAAGCATTGAGAAAAAAGAGACACGTTGTTGCTGTAACTGGGGATGGAACTAATGATGCGCCTGCATTGCATGAGGCAGACATCGGTCTTGCAATGGGTATTCAAGGGACGGAAGTTGCAAAGGAAAGCTCAGATATTATTATCTTGGATGACAATTTTGCTTCTGTTGTTAAGGTTGTTAGGTGGGGCCGTTCAGTTTATGCGAATATTCAGAAGTTTATTCAGTTTCAGCTTACAGTTAATGTTGCTGCCCTTGTTATTAATGTTGTTGCGGCAGTGTCTTCTGGGAATGTTCCACTAAACGCAGTGCAGCTTCTTTGGGTTAATCTTATCATGGATACTTTAGGAGCATTGGCATTAGCAACTGAACCACCAACAGATCATCTTATGCACAGGCCGCCTGTGGGAAGAAGTGAACCTCTTGTAACAAATATTATGTGGAGAAATTTGCTGATACAGGCCCTTTATCAAGTATCTGTGCTGCTTGTTCTCAACTTTGCGGGTATCCATTTACTTAATCTGGAGCATGAAACGATAACACGTGCTAACGAACTGAAGAATACTCTGATATTCAATGCATTTGTCCTTTGTCAGATTTTCAATGAGGTCAACGCTCGGAAGCCTGATGAAATTAATGTTTTCAAAGGAGTTACCAAAAATTATATCTTCTTGGCGATAGTGGGTCTTACTCTAGTACTTCAGGTTATTATCATTATGTTTCTTGGGAAGTTTACTTCTACTGTCAGGCTTAGCTGGCAACTTTGGTTAGTTTCCATCGTTATTGGTGTTATCAGTTGGCCCCTCGCCGTCGTTGGGAAACTGATACCTGTTCCTGAAACTCCAATTCATAAATTCTTCACGAAACAGGTTCGTAGGCGAAGAAATTCGTAA 3216 41.92 MSNFNGRRPFDLEGGSSNSGEVEDEDLSSSNPFDIARTKNASLKRLKRWRQAALVLNASRRFRYTLDLKKEEEKREAIRKIRAHAQAILAAYRFKLAGDRLIGGSTTPSIPNGVYEVGQEQLAVLVKDHNLSALQQLGGVKGVSNSLQTNLEKGIHGDDEDLLKRRKEFGSNTYPQKKGRSFWRFLWEAWQDLTLIILIIAAVASLGLGIKSEGIKEGWYDGGSICLAVIIVIVVTAISDYRQSLQFQNLNEEKRNIHLEVIRGGRRVEVSIYDVVVGDVIPLNIGDQVPADGILISGHCLAIDESSMTGESKIVHKHAKEPFLLSGCKVADGSGTMLVTSVGSNTEWGLLMASISDDTGEETPLQVRLNGVATFIGIVGLTVAFAVLIVLFIRYFTGHTTNAEGQVQFIAGQTKAGKAIDGAIKIITVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTMNEMTIVEAYVGGKKIDPPEIKSELSSTSLSILLEGIAQNTNGSIYFPEGGGDVEVSGSPTEKAILSWGIKLGMSFELIRSESSIVHVFPFNSEKKRGGVAVRLPGSQAHIHWKGAAEIVLASCTQHIDLDGRLVPMDEDEKMFFKKAIEDMAARTLRCVAIAYRSYDIEKIPADEEQLTKWVLPEDDLVLLAIVGIKDPCRPGVKDAVHLCQIAGVKVRMVTGDNIQTAKAIALECGILSSAADIYEPNIMEGKAFRELSDEQREEIAEKISVMGRSSPNDKLLLVQALRKKRHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAVSSGNVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRPPVGRSEPLVTNIMWRNLLIQALYQVSVLLVLNFAGIHLLNLEHETITRANELKNTLIFNAFVLCQIFNEVNARKPDEINVFKGVTKNYIFLAIVGLTLVLQVIIIMFLGKFTSTVRLSWQLWLVSIVIGVISWPLAVVGKLIPVPETPIHKFFTKQVRRRRNS 1071
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1476110 1499387 + Bda004819.1 Bda11g00111 15219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00111 1071 PRINTS Sodium/potassium-transporting ATPase signature 599 617 - -
Bda11g00111 1071 PRINTS Sodium/potassium-transporting ATPase signature 473 494 - -
Bda11g00111 1071 PRINTS Sodium/potassium-transporting ATPase signature 223 243 - -
Bda11g00111 1071 MobiDBLite consensus disorder prediction 1 33 - -
Bda11g00111 1071 SUPERFAMILY Calcium ATPase, transmembrane domain M 138 1052 IPR023298 -
Bda11g00111 1071 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 129 1052 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Bda11g00111 1071 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 487 685 IPR023299 GO:0000166
Bda11g00111 1071 Gene3D - 477 833 IPR023214 -
Bda11g00111 1071 SUPERFAMILY HAD-like 478 893 IPR036412 -
Bda11g00111 1071 Pfam haloacid dehalogenase-like hydrolase 477 802 - -
Bda11g00111 1071 Gene3D - 490 688 IPR023299 GO:0000166
Bda11g00111 1071 CDD P-type_ATPase_Ca_PMCA-like 162 921 - -
Bda11g00111 1071 Gene3D - 188 1041 - -
Bda11g00111 1071 SMART Cation_ATPase_N_a_2 133 210 IPR004014 -
Bda11g00111 1071 Gene3D - 41 96 - -
Bda11g00111 1071 SFLD p-type atpase 462 840 IPR044492 -
Bda11g00111 1071 ProSitePatterns E1-E2 ATPases phosphorylation site. 482 488 IPR018303 -
Bda11g00111 1071 PRINTS P-type cation-transporting ATPase superfamily signature 304 318 - -
Bda11g00111 1071 PRINTS P-type cation-transporting ATPase superfamily signature 480 494 - -
Bda11g00111 1071 PRINTS P-type cation-transporting ATPase superfamily signature 812 824 - -
Bda11g00111 1071 PRINTS P-type cation-transporting ATPase superfamily signature 703 713 - -
Bda11g00111 1071 PRINTS P-type cation-transporting ATPase superfamily signature 681 692 - -
Bda11g00111 1071 PRINTS P-type cation-transporting ATPase superfamily signature 788 807 - -
Bda11g00111 1071 Pfam Cation transporting ATPase, C-terminus 873 1050 IPR006068 -
Bda11g00111 1071 Pfam E1-E2 ATPase 258 458 - -
Bda11g00111 1071 Gene3D - 160 356 - -
Bda11g00111 1071 PANTHER CATION TRANSPORTING ATPASE 18 1065 - -
Bda11g00111 1071 PANTHER CALCIUM-TRANSPORTING ATPASE 18 1065 - -
Bda11g00111 1071 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 420 504 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda11g00111 1071 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 225 397 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda11g00111 1071 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 754 870 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda11g00111 1071 SFLD C1.7: P-type atpase like 462 840 - -
Bda11g00111 1071 SUPERFAMILY Calcium ATPase, transduction domain A 258 353 IPR008250 -
Bda11g00111 1071 Pfam Cation transporter/ATPase, N-terminus 137 205 IPR004014 -
Bda11g00111 1071 Pfam Ca2+-ATPase N terminal autoinhibitory domain 31 73 IPR024750 GO:0005516
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g00111 Bda-Chr11:1476110 Bda12g01035 Bda-Chr12:42089457 0 dispersed
Bda11g00111 Bda-Chr11:1476110 Bda01g00590 Bda-Chr1:32895573 0 transposed
Bda11g00111 Bda-Chr11:1476110 Bda03g00182 Bda-Chr3:1491857 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00111 K01537 - mnt:21389033 1632.46