Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00117 ATGATTTCTCGGGTGAACATGGTTTTAGTTGGAGCACATGCCATCATGACCAATGGTGGCCTAATAGTTCCTGTTGGATTAAATATGCTTGCACTTGCTGCTCAAAGGCACGCTGTTCCCTTTGTTGTACTTGCTGGAAGCCACAAGTTGTGTCCATTGTATCCACATAATCCTGAGGTTCTGCTCAATGAGCTGCGATCCCCATCTGAGCTTCTGAATTTTGGAGAATTTTCAGACTGCATGGATTTTAGAAGTGACACTGGTTCTCCTCTTCTTCATGTGGTCAATCCAACATTTGATTATGTGCCACCAAAACTCGTTAGTTTGTTTATTACAGACACTGGGGGACATAATCCATCGTACATGTACCGGCTCATTGGTGATTATTACTCTGCTAAAGATCTAGTAGTACAACGGTGA 420 42.86 MISRVNMVLVGAHAIMTNGGLIVPVGLNMLALAAQRHAVPFVVLAGSHKLCPLYPHNPEVLLNELRSPSELLNFGEFSDCMDFRSDTGSPLLHVVNPTFDYVPPKLVSLFITDTGGHNPSYMYRLIGDYYSAKDLVVQR 139
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1614800 1617228 + Bda004827.2 Bda11g00117 15225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00117 139 Pfam Initiation factor 2 subunit family 2 119 IPR000649 GO:0044237
Bda11g00117 139 Gene3D - 1 129 IPR042529 -
Bda11g00117 139 PANTHER BNAA01G32370D PROTEIN 1 137 - -
Bda11g00117 139 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 1 137 - -
Bda11g00117 139 SUPERFAMILY NagB/RpiA/CoA transferase-like 2 134 IPR037171 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g01261 Bda-Chr9:44244658 Bda11g00117 Bda-Chr11:1614800 2.30E-09 dispersed
Bda01g01886 Bda-Chr1:55032435 Bda11g00117 Bda-Chr11:1614800 1.96E-93 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00117 K03754 - fve:101310833 269.24