Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00121 ATGGAGGATAAAACATGTCAAGGTGAGAATCGTGAGGCTAGCTTTGTGAAGTTGCCTGAGATCAGGTTTACGAAGCTCTTCATCAATGGAGAATTTGTGGATGCAGTTTCAGGGAAGACGATGGAGACAATTGATCCGAGAACAGGAGAGGTGATAGGAAGAGTGGCGGAAGGAGATAAAGAAGACGTTGACTTAGCCGTCGAGTCTGCAAGACGAGCCTTCGACCATGGCTCCTGGCCTCGTATGCCCCCCTGCGAAAGAGGAAGGATACTACTAAAGCTAGCAGATTTGATAGAAGAACATGCAGAGGAATTAGCTACTTTAGACGCCATTGATGCTGGAAAATTGTTCAAAATGTGCATGGCAATGGACGTTCCTCACGTGGCCCAAATTCTCCGTTACTACGCCGGAGCCGCCGATAAAGTTTCCGGCGAGGTGCTCAAAATGTCGAGGGAGTTTCACGGCTACACTTTGCTAGAGCCGGTAGGAGTGGTCGGCCTCATCATTCCGTGGAATTTTCCGATGCTATTCGTCTTTATAAAGATCAGTCCCGCCCTGGCCGCAGGTTGCACTGTAGTCGTAAAGCCGGCCGAGCAGACGCCTCTCTCCGCTCTATATTGTGCTCATCTTGCAAAACTGGCTGGAGTGCCCGATGGAGTACTGAATGTTGTAACTGGGTTTGGACCGACGGCCGGAGCTGCAGTCAGCTCTCACATGGACATTGATGCAGTGAGTTTTACTGGATCTACCGAAGTTGGGCGTAAAATAATGGAAGCAGCAGCAAAAAGCAACCTAAAGACAGTGACCCTAGAGCTAGGAGGAAAGTCGCCCCTCATTATTTTTGATGATGCTGATGCAGACAAGGCTGCAAACATGGCTTTGCTGGGCATTCTTGTCAACAAGGGGGAGATTTGTGTTGCTGGGTCTAGAGTACTTGTTCAAGAAGGTATTTATGATCAAGTTGTGGAGAAACTAGTGGAGAAGGCTAAGAATTGGGTGGTTGGTGACCCTTTTGACCCTAATGTTCAACAAGGACCTCAGGTTGATAAAGCTCAATTCGAAAAAATACTCTCCTACATTGATCATGGACAAAGAGAGGGAGCCACTTTGTTGACAGGAGGAAAGTCCATTGGCTGCAAGGGTTATTACGTCGAGCCTACAATTTTCACTGATGTTAAGGATGAGATGGTTATAGCCCAAGAGGAGATATTTGGACCTGTAATGGCCCTTATGAAGTTCAAGACTGTGGAAGAAGCTATAAAAAGGGCAAATGCTACAAAGTATGGTTTAGCAGCAGGGATTGTTACGAACAACATCGACGTAGCGAACACGGTTTCGAGGTCAATCAGGGCCGGATCCGTCTGGATTAATTGCTATATGGCTATGGATGTTGGGGTGGCTTTCGGTGGTTATAAGATGAGTGGATTTGGTAAGGATTATGGAATGGATGGTATCAAGAAGTTTCTCCAAGTGAAAGCTATTGTCACTCCCATTTACAACTCCCCTTGGCTTTGA 1515 46.93 MEDKTCQGENREASFVKLPEIRFTKLFINGEFVDAVSGKTMETIDPRTGEVIGRVAEGDKEDVDLAVESARRAFDHGSWPRMPPCERGRILLKLADLIEEHAEELATLDAIDAGKLFKMCMAMDVPHVAQILRYYAGAADKVSGEVLKMSREFHGYTLLEPVGVVGLIIPWNFPMLFVFIKISPALAAGCTVVVKPAEQTPLSALYCAHLAKLAGVPDGVLNVVTGFGPTAGAAVSSHMDIDAVSFTGSTEVGRKIMEAAAKSNLKTVTLELGGKSPLIIFDDADADKAANMALLGILVNKGEICVAGSRVLVQEGIYDQVVEKLVEKAKNWVVGDPFDPNVQQGPQVDKAQFEKILSYIDHGQREGATLLTGGKSIGCKGYYVEPTIFTDVKDEMVIAQEEIFGPVMALMKFKTVEEAIKRANATKYGLAAGIVTNNIDVANTVSRSIRAGSVWINCYMAMDVGVAFGGYKMSGFGKDYGMDGIKKFLQVKAIVTPIYNSPWL 504
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1644231 1647868 + Bda004831.1 Bda11g00121 15229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00121 504 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 298 309 IPR016160 GO:0016491
Bda11g00121 504 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 274 463 IPR016163 GO:0016620
Bda11g00121 504 CDD ALDH_F1-2_Ald2-like 24 495 - -
Bda11g00121 504 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 28 492 IPR016162 GO:0016491
Bda11g00121 504 SUPERFAMILY ALDH-like 17 500 IPR016161 GO:0016491
Bda11g00121 504 Pfam Aldehyde dehydrogenase family 33 494 IPR015590 GO:0016491
Bda11g00121 504 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER C4-LIKE 10 504 - -
Bda11g00121 504 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 10 504 - -
Bda11g00121 504 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 270 277 IPR029510 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g02225 Bda-Chr1:58076734 Bda11g00121 Bda-Chr11:1644231 9.60E-173 dispersed
Bda06g00575 Bda-Chr6:8003042 Bda11g00121 Bda-Chr11:1644231 9.41E-120 dispersed
Bda11g00121 Bda-Chr11:1644231 Bda11g01261 Bda-Chr11:13221454 0 dispersed
Bda01g01881 Bda-Chr1:54992407 Bda11g00121 Bda-Chr11:1644231 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00121 K12355 - jre:108992687 782.711