Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00148 ATGAAGAGGGAACACTGCCAGGTGAATCTTCAGCCTGACCCATCTTCAATGGCCGGGAAATCTAAGATTTGGGAGGATGAGTCACAACGAGATGGAGGTATGGATGAACTTCTGGCTGTTTTGGGATACGAAGTGAGGTCGTCGGACATGGCCGACGTTGCCCAGAAGCTAGAACAGCTTGAAGAATTTATGGGTAATGTTCAGGAAGATGGTCTCTCGCATCTTGCGTCGGAAACTGTCCATTATAATCCCTCCGATCTTTCCACCTATCTCGAAAGCATGATTTACGAGCTTAACCAATCTCCAACTTTCGATTCCGTTGTCGGCCCGCTGTCTCAAACGCCGGGAGACGATCCGTTTCTAGCTCCGTCTGATTCCTCCACCATAACCTCCGTTGATTTCTCAAAACAGAGCAACCAGAGGTTGTTCGAAGGGTCTTCTTGTTCAGATTATGATCTGAAAGCTATTCCTGGTAAGGCTATTTTAAAACAAAATACTCAGTTTGAAGAAACTTCGGATAGAGAGAAGAAACGATTGAAACCCTCATCTGGGCCGGAATCGGAATTGCTTTCCTATTCAATAACTCGGCCTGTCATTCTAGTTGACTCGCAAGAAAACGGAATTCAACTCGTACACACGCTGATGGCTTGCGCCGAAGCTGTTCACCAAAACAGCCTAAATCTGGCTGAGGCTCTCCTCAAACGAGTCGGCTATCTCGCCGGGTCTCAAACTGGAGCTATGCGGAAAGTCGCCGCCTACTTCGCCGAAGCTATAGCTCGGAGGATTTACAGGCTCTACCCTCAGAACGCCCTCGACCATTCTATTTCCGATTTGCTTCAAGTTCATTTCTACGAGAGCTGTCCTTATCTTAAATTTGCTCATTTCACAGCAAATCAAGCGATTCTCGAAGCTTTTGAAGGTAAAAATCGAGTCCACGTTATTGATTTTTCTATGAATCAAGGTATGCAATGGCCGGCGCTTCTTCAAGCTCTGGCTCTGCGACCTGGTGGTCCACCTATTTTCCGGCTCACTGGAATTGGGCCTCCGGCGACGGATAATTCAGATTACCTCCAAGAAGTGGGTTGGAAGCTCGCCCGATTAGCTGAAATGATTCACGTTAAGTTTGAATACCGTGGGTTTGTTGCCAACAGCTTGGCAGATCTTGATTCTTCGATGCTCGAACTAAGGCCGAGTGAGACCGAGACAGTGGCGGTCAACTCAGTTTTCGAGTTTCATAAGCTCTTGGCTCGGCCTGGAGCGATCGGAAAAGTGTTGTCAGTCGTGAAGCAGATGAAGCCGGCGATTATGACTGTAGTTGAGCAAGAAGCTAGCCATAACGGCCCGGTCTTTCTGGACCGGTTCACCGAGTCACTCCACTATTACTCGACTCTTTTTGACTCGTTGGAAGGCTCAGCCACCGTTAACAATCAAGACAAGGTAATGACAGAGATGTACTTCGGGAAGCAAATATGTAACGTGGTTGCATGTGAAGGCGCAGACAGGGTAGAGCGGCATGAGAATATGACTCAGTGGCGAACTCGGTTCACCTCAGCTGGGTTCAATTCGGCTTATTTAGGGTCTAACGCGTTCAAACAAGCCAGCATGTTGCTTGCTCTGTTCGGAAGTGGAGATGGGTACGGAGTAGAAGAGCGAAATGGGTGTCTGATGCTGGGCTGGCACAGCAGACCTCTGATCACCACCTCGGCTTGGACGGTGGAAGAGAAAGGAGGCAGACTCAGTGAGTCAGCTCGGTAA 1755 48.66 MKREHCQVNLQPDPSSMAGKSKIWEDESQRDGGMDELLAVLGYEVRSSDMADVAQKLEQLEEFMGNVQEDGLSHLASETVHYNPSDLSTYLESMIYELNQSPTFDSVVGPLSQTPGDDPFLAPSDSSTITSVDFSKQSNQRLFEGSSCSDYDLKAIPGKAILKQNTQFEETSDREKKRLKPSSGPESELLSYSITRPVILVDSQENGIQLVHTLMACAEAVHQNSLNLAEALLKRVGYLAGSQTGAMRKVAAYFAEAIARRIYRLYPQNALDHSISDLLQVHFYESCPYLKFAHFTANQAILEAFEGKNRVHVIDFSMNQGMQWPALLQALALRPGGPPIFRLTGIGPPATDNSDYLQEVGWKLARLAEMIHVKFEYRGFVANSLADLDSSMLELRPSETETVAVNSVFEFHKLLARPGAIGKVLSVVKQMKPAIMTVVEQEASHNGPVFLDRFTESLHYYSTLFDSLEGSATVNNQDKVMTEMYFGKQICNVVACEGADRVERHENMTQWRTRFTSAGFNSAYLGSNAFKQASMLLALFGSGDGYGVEERNGCLMLGWHSRPLITTSAWTVEEKGGRLSESAR 584
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1930930 1932684 - Bda004859.1 Bda11g00148 15256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00148 584 ProSiteProfiles GRAS family profile. 201 571 IPR005202 -
Bda11g00148 584 Pfam GRAS domain family 210 571 IPR005202 -
Bda11g00148 584 PANTHER DELLA PROTEIN GAI1-RELATED 2 572 IPR030006 GO:0003712|GO:0005634
Bda11g00148 584 MobiDBLite consensus disorder prediction 168 183 - -
Bda11g00148 584 MobiDBLite consensus disorder prediction 1 21 - -
Bda11g00148 584 MobiDBLite consensus disorder prediction 168 188 - -
Bda11g00148 584 SMART DELLA_2 35 108 - -
Bda11g00148 584 Coils Coil 50 70 - -
Bda11g00148 584 Gene3D - 33 98 IPR038088 -
Bda11g00148 584 Pfam Transcriptional regulator DELLA protein N terminal 35 102 IPR021914 -
Bda11g00148 584 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 2 572 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01147 Bda-Chr1:46545196 Bda11g00148 Bda-Chr11:1930930 0 dispersed
Bda04g00679 Bda-Chr4:55416044 Bda11g00148 Bda-Chr11:1930930 4.67E-51 dispersed
Bda09g00054 Bda-Chr9:1165544 Bda11g00148 Bda-Chr11:1930930 5.58E-13 dispersed
Bda09g00057 Bda-Chr9:1197850 Bda11g00148 Bda-Chr11:1930930 1.12E-77 dispersed
Bda11g00148 Bda-Chr11:1930930 Bda13g01801 Bda-Chr13:41827051 0 dispersed
Bda03g01173 Bda-Chr3:13524060 Bda11g00148 Bda-Chr11:1930930 4.99E-55 transposed
Bda07g01379 Bda-Chr7:16636008 Bda11g00148 Bda-Chr11:1930930 2.15E-99 transposed
Bda09g01170 Bda-Chr9:42548293 Bda11g00148 Bda-Chr11:1930930 3.40E-136 transposed
Bda01g01823 Bda-Chr1:54372487 Bda11g00148 Bda-Chr11:1930930 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16566 PF03514 GRAS 2.20E-133 CL0063 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00148 K14494 - tcc:18609825 849.736