Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00163 ATGGTGGAAAGAGCGTCAAATAGGGGTGGCGCTGGCCAATCGTCCGGTCAAAGTTGCGGCGCCAGAGCTCCAAGCGTTAGAGACACTATCTGCAACGCCGGTGCCGGTGCCGCATCAGGTGCTATTGCTGCTACGTTTGTATGCCCTTTGGATGTGATAAAGACGAGATTGCAGGTTTATGGTCTTCCTTCTGGACATAGAGGTAATGTCATTATTACAAGCTTAAAGGACATCATCCGTACTGAAGGCTTGAGGGGAATGTATCATGGTCTTTCTCCAACAATTATTGCTCTTCTTCCAAACTGGGCAGTTTACTTCACAGTATATGAGCATCTTAAAGGCCTACTCCATTCAAATGGTCATGGTGACCAACTCTCATTGGGTGCAAATATGTTTGCTGCCGCTAGTGCAGGGGCTGCCACTGCCCTCTCCACGAATCCATTGTGGGTTGTTAAAACTAGACTCCAAACCCAGGGAATGAGGCCCGGTGTGGTTCCTTATACAGGAATACTTTCGGCATTCAGAAGGATTGTACACGAGGAAGGAGTGAGGGGACTTTATAGTGGAATCATCCCTTCATTGGCCGGGATAAGTCACGTTGCGATACAATTTCCTGCGTACGAGAAGCTCAAATTTTACTTGGCACAAAGGGAAAACACAACCACTGATAAGCTAGGCCCTGGAAGTGTAGGCATTGCCTCTGCCATTTCCAAAATCACTGCTTCTTTATTAACCTATCCTCATGAGGTAATTCGTTCTCGTCTTCAAGAGCAAGGACAACAAGCGAGAACTGTCGGGATTCAATATACCGGGGTGATAGATTGCGTAAAAAAAGTGTTGGAAAAGGAAGGTTTTTGCGGATTTTATCGGGGTTGCGCTACCAATCTTCTGCGAACAACCCCATCGGCCGTTATAACTTTTACTAGTTACGAGATGATATGTCGATTCCTCCAGCAACTTTTTCCGCCGGAAAATGGTGAGAGTTCATACCAAAGATAA 999 46.35 MVERASNRGGAGQSSGQSCGARAPSVRDTICNAGAGAASGAIAATFVCPLDVIKTRLQVYGLPSGHRGNVIITSLKDIIRTEGLRGMYHGLSPTIIALLPNWAVYFTVYEHLKGLLHSNGHGDQLSLGANMFAAASAGAATALSTNPLWVVKTRLQTQGMRPGVVPYTGILSAFRRIVHEEGVRGLYSGIIPSLAGISHVAIQFPAYEKLKFYLAQRENTTTDKLGPGSVGIASAISKITASLLTYPHEVIRSRLQEQGQQARTVGIQYTGVIDCVKKVLEKEGFCGFYRGCATNLLRTTPSAVITFTSYEMICRFLQQLFPPENGESSYQR 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2115551 2118719 - Bda004877.1 Bda11g00163 15271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00163 332 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Bda11g00163 332 PANTHER NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1, CHLOROPLASTIC 23 326 - -
Bda11g00163 332 Pfam Mitochondrial carrier protein 32 118 IPR018108 -
Bda11g00163 332 Pfam Mitochondrial carrier protein 124 216 IPR018108 -
Bda11g00163 332 Pfam Mitochondrial carrier protein 229 319 IPR018108 -
Bda11g00163 332 PRINTS Mitochondrial carrier protein signature 234 256 IPR002067 GO:0055085
Bda11g00163 332 PRINTS Mitochondrial carrier protein signature 140 158 IPR002067 GO:0055085
Bda11g00163 332 PRINTS Mitochondrial carrier protein signature 45 59 IPR002067 GO:0055085
Bda11g00163 332 PRINTS Mitochondrial carrier protein signature 32 45 IPR002067 GO:0055085
Bda11g00163 332 PRINTS Mitochondrial carrier protein signature 90 110 IPR002067 GO:0055085
Bda11g00163 332 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 23 326 IPR044712 GO:0006862|GO:0055085
Bda11g00163 332 ProSiteProfiles Solute carrier (Solcar) repeat profile. 125 213 IPR018108 -
Bda11g00163 332 MobiDBLite consensus disorder prediction 1 22 - -
Bda11g00163 332 ProSiteProfiles Solute carrier (Solcar) repeat profile. 225 316 IPR018108 -
Bda11g00163 332 Gene3D Mitochondrial carrier domain 13 120 IPR023395 -
Bda11g00163 332 Gene3D Mitochondrial carrier domain 121 322 IPR023395 -
Bda11g00163 332 ProSiteProfiles Solute carrier (Solcar) repeat profile. 27 115 IPR018108 -
Bda11g00163 332 MobiDBLite consensus disorder prediction 8 22 - -
Bda11g00163 332 SUPERFAMILY Mitochondrial carrier 27 312 IPR023395 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g02021 Bda11g00163 CCT
Bda01g02021 Bda11g00163 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda10g01144 Bda-Chr10:45498098 Bda11g00163 Bda-Chr11:2115551 2.02E-27 dispersed
Bda11g00163 Bda-Chr11:2115551 Bda12g00080 Bda-Chr12:591857 8.20E-134 dispersed
Bda11g00163 Bda-Chr11:2115551 Bda13g01267 Bda-Chr13:35050116 7.60E-10 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00163 K15115 - qsu:112039500 462.611