Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda11g00187 | ATGGCAACTATACAGAGAGTATCGCAGTCCAGTTTAGGGGCAAGTCCGAGCAATTATGGCTTAAGTAAGAGCAGCGGTGACGGTGGTGGAGAAGCTGCTGTGTCGGATCAGTTTCCCGCGGGATTGAGGGTTCTTGTTGTTGACGATGACACCACCTGCTTGAGGATTATTGAGCAAATGCTACTCAGGTGTCTATATCACGTGACTATGTGTTCCCAAGCTGCTGTTGCTTTAAACCTTCTGCGTGAGAAGAAAGGCTGTTTTGATGTGGTATTGAGTGATGTGCACATGCCTGATATGGATGGATATAAGCTCCTTGAATATGTTGGGCTTGAGATGGACCTTCCTGTCATAATGATGTCGGCTGATAAAAGAACAAGTGCCGTGATGAAAGGAATCAGACATGGGGCTTGTGATTATTTAATTAAGCCCATTCGCGAGGAAGAACTGAAGAATATCTGGCAGCATGTTGTTCGAAAAAAATGGAATGAATATAAGGAACTTGAAAATTCTGGAAGTTTGGAAGAGAATGATAAGCAAATCCGTGGGACTGATGATGCAGAATGTGCTTCTTCTGCACACGAAGGAGAAGAAGGAATTATGAGAGCTACTAGAAAAAGAAGCAGTTCGAAAGAAGATGACAGTGAACTGGAAAATGATGATCCTTCTGCCTCAAAGAAGCCACGAGTCGTGTGGTCTGTGGAGTTGCACCAACAATTTGTCAGTGCTGTGAACCAACTCGGCCTAGATAAGGCTGTGCCTAAGAGGATTCTTGAATTAATGAACGTACCTGGTTTAACAAGAGAAAATGTTGCTAGCCATCTGCAGAAATTCAGGCTATATTTAAAGAGGCTAAGCGGAGTAGCTCAACAACAAAATGCTATTCCAAATATTTATTGTGGACCTTTAGAACAAAATTTTAAATTGGATGCATTGGGAGTTGAAGCGTTGGCCGTCTCTGGTCAAATTTCTCCACAAACTCTAGCAGCCTTGCACGCTGAGCTGTTAGGCCGATCAATGTGTAACCTGAGACCATCAATGGATCAGCCAGCTGTTTTGCAAGGAACATTGCTGGGAACCAAGCTAATAGCAGTTGAACATGAACCAGTTGATCCATTTAGTCAAACTTTGGTGAAATGCCAATCTAGTAATTCCAAAAATTATTCGCCTTCCGTTATGTCTGTTGATTGTGTTACTTCTGGATATAGTGGTGCATACCAACCAAATGGGCCTAGTTTTGTAGGGCCAAACGATCTTGGTAGGATGAGTTCTCAGAATGCTAACATGTTGGTTGGAACCCTGCAGCAGCAGCAACAATTGCATAAACAATATGAGCAACGGCAGGAGCAAAAACAACATCCACAACAGCCACAACAGCCACAACAGCCACAACAGCCACAACAGCAGTTAATGTCATCAGAGCCCAGCTGCTCAATCAATGTCCAGCCATCTTGCCTGGTTCTGCCCTCACATTCATCGGTCAATTTTCTTGCTGGAAACATTCCTGATTTTTCCAAACATAATCACAACATTAATAGGGGTACTATTATTGATTACAGCATTGCCTCAACTCAACGCGTCAGTTCATTGTCAAATTTTAACCAGACAGATGGGGATCTAAACCCTCATAATGCAATTAGTGGGTATTTGACTCAAATGTCAGGTTCTTCAGTGTCGTATTATTCGTTAAATGGTGCCAATAACTCTGTTGGTCACGTAGAAGCCTCCAGATTAACTTCTGCCGGCAGTCATTTACCTGGGGTTTCTCACAAGAAGACTGATATAAAGGGATTTTATGGCTCAAAATCAGAAGAAATGCTTGATCAAGGCCGTTTTAGGAACCTTGTATTTGTTGGTAAAGGGTCTTCTTCTCAAAGCCGATCTCCAGTTGAAGAGATTGTTTCACCAATGACTAATGAGCAACTTGACCATTGGAAAAATTATATGCCAAACCGTAGCAGGATGAAGCAGGAACCTCTCATAAAGTACGTAGAGAGTACAGAGGTGGGACTTCCGATACAAAAAGTTCTTCAATGA | 2037 | 42.56 | MATIQRVSQSSLGASPSNYGLSKSSGDGGGEAAVSDQFPAGLRVLVVDDDTTCLRIIEQMLLRCLYHVTMCSQAAVALNLLREKKGCFDVVLSDVHMPDMDGYKLLEYVGLEMDLPVIMMSADKRTSAVMKGIRHGACDYLIKPIREEELKNIWQHVVRKKWNEYKELENSGSLEENDKQIRGTDDAECASSAHEGEEGIMRATRKRSSSKEDDSELENDDPSASKKPRVVWSVELHQQFVSAVNQLGLDKAVPKRILELMNVPGLTRENVASHLQKFRLYLKRLSGVAQQQNAIPNIYCGPLEQNFKLDALGVEALAVSGQISPQTLAALHAELLGRSMCNLRPSMDQPAVLQGTLLGTKLIAVEHEPVDPFSQTLVKCQSSNSKNYSPSVMSVDCVTSGYSGAYQPNGPSFVGPNDLGRMSSQNANMLVGTLQQQQQLHKQYEQRQEQKQHPQQPQQPQQPQQPQQQLMSSEPSCSINVQPSCLVLPSHSSVNFLAGNIPDFSKHNHNINRGTIIDYSIASTQRVSSLSNFNQTDGDLNPHNAISGYLTQMSGSSVSYYSLNGANNSVGHVEASRLTSAGSHLPGVSHKKTDIKGFYGSKSEEMLDQGRFRNLVFVGKGSSSQSRSPVEEIVSPMTNEQLDHWKNYMPNRSRMKQEPLIKYVESTEVGLPIQKVLQ | 678 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 2406265 | 2410826 | - | Bda004904.1 | Bda11g00187 | 15295 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda11g00187 | 678 | PIRSF | RR_ARR_type-B | 22 | 669 | IPR017053 | GO:0003677|GO:0003700|GO:0009736 | |
Bda11g00187 | 678 | Pfam | Response regulator receiver domain | 44 | 152 | IPR001789 | GO:0000160 | |
Bda11g00187 | 678 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 227 | 280 | IPR006447 | GO:0003677 | |
Bda11g00187 | 678 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR ARR14 | 38 | 497 | - | - | |
Bda11g00187 | 678 | SMART | REC_2 | 42 | 154 | IPR001789 | GO:0000160 | |
Bda11g00187 | 678 | CDD | REC_typeB_ARR-like | 44 | 158 | - | - | |
Bda11g00187 | 678 | Pfam | Myb-like DNA-binding domain | 229 | 277 | IPR001005 | - | |
Bda11g00187 | 678 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 38 | 497 | IPR045279 | GO:0009736 | |
Bda11g00187 | 678 | MobiDBLite | consensus disorder prediction | 434 | 475 | - | - | |
Bda11g00187 | 678 | SUPERFAMILY | CheY-like | 41 | 169 | IPR011006 | - | |
Bda11g00187 | 678 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 224 | 283 | IPR017930 | - | |
Bda11g00187 | 678 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Bda11g00187 | 678 | MobiDBLite | consensus disorder prediction | 176 | 225 | - | - | |
Bda11g00187 | 678 | ProSiteProfiles | Response regulatory domain profile. | 43 | 158 | IPR001789 | GO:0000160 | |
Bda11g00187 | 678 | Gene3D | - | 223 | 286 | - | - | |
Bda11g00187 | 678 | Gene3D | - | 42 | 178 | - | - | |
Bda11g00187 | 678 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
Bda11g00187 | 678 | SUPERFAMILY | Homeodomain-like | 225 | 284 | IPR009057 | - | |
Bda11g00187 | 678 | MobiDBLite | consensus disorder prediction | 450 | 475 | - | - | |
Bda11g00187 | 678 | MobiDBLite | consensus disorder prediction | 176 | 226 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda03g00918 | Bda-Chr3:8109038 | Bda11g00187 | Bda-Chr11:2406265 | 2.99E-40 | dispersed | |
Bda03g01158 | Bda-Chr3:12761839 | Bda11g00187 | Bda-Chr11:2406265 | 5.44E-106 | dispersed | |
Bda08g00304 | Bda-Chr8:3176640 | Bda11g00187 | Bda-Chr11:2406265 | 4.81E-132 | dispersed | |
Bda09g01515 | Bda-Chr9:46870769 | Bda11g00187 | Bda-Chr11:2406265 | 9.43E-25 | dispersed | |
Bda11g00074 | Bda-Chr11:917530 | Bda11g00187 | Bda-Chr11:2406265 | 6.41E-94 | dispersed | |
Bda11g00695 | Bda-Chr11:6921384 | Bda11g00187 | Bda-Chr11:2406265 | 5.68E-24 | dispersed | |
Bda01g01795 | Bda-Chr1:54160869 | Bda11g00187 | Bda-Chr11:2406265 | 0 | wgd | |
Bda11g00187 | Bda-Chr11:2406265 | Bda08g00081 | Bda-Chr8:750110 | 2.61E-23 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16567 | PF00072 | Response_reg | 9.50E-22 | CL0304 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda11g00187 | - | K14491 | jre:109003013 | 712.99 |