Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00187 ATGGCAACTATACAGAGAGTATCGCAGTCCAGTTTAGGGGCAAGTCCGAGCAATTATGGCTTAAGTAAGAGCAGCGGTGACGGTGGTGGAGAAGCTGCTGTGTCGGATCAGTTTCCCGCGGGATTGAGGGTTCTTGTTGTTGACGATGACACCACCTGCTTGAGGATTATTGAGCAAATGCTACTCAGGTGTCTATATCACGTGACTATGTGTTCCCAAGCTGCTGTTGCTTTAAACCTTCTGCGTGAGAAGAAAGGCTGTTTTGATGTGGTATTGAGTGATGTGCACATGCCTGATATGGATGGATATAAGCTCCTTGAATATGTTGGGCTTGAGATGGACCTTCCTGTCATAATGATGTCGGCTGATAAAAGAACAAGTGCCGTGATGAAAGGAATCAGACATGGGGCTTGTGATTATTTAATTAAGCCCATTCGCGAGGAAGAACTGAAGAATATCTGGCAGCATGTTGTTCGAAAAAAATGGAATGAATATAAGGAACTTGAAAATTCTGGAAGTTTGGAAGAGAATGATAAGCAAATCCGTGGGACTGATGATGCAGAATGTGCTTCTTCTGCACACGAAGGAGAAGAAGGAATTATGAGAGCTACTAGAAAAAGAAGCAGTTCGAAAGAAGATGACAGTGAACTGGAAAATGATGATCCTTCTGCCTCAAAGAAGCCACGAGTCGTGTGGTCTGTGGAGTTGCACCAACAATTTGTCAGTGCTGTGAACCAACTCGGCCTAGATAAGGCTGTGCCTAAGAGGATTCTTGAATTAATGAACGTACCTGGTTTAACAAGAGAAAATGTTGCTAGCCATCTGCAGAAATTCAGGCTATATTTAAAGAGGCTAAGCGGAGTAGCTCAACAACAAAATGCTATTCCAAATATTTATTGTGGACCTTTAGAACAAAATTTTAAATTGGATGCATTGGGAGTTGAAGCGTTGGCCGTCTCTGGTCAAATTTCTCCACAAACTCTAGCAGCCTTGCACGCTGAGCTGTTAGGCCGATCAATGTGTAACCTGAGACCATCAATGGATCAGCCAGCTGTTTTGCAAGGAACATTGCTGGGAACCAAGCTAATAGCAGTTGAACATGAACCAGTTGATCCATTTAGTCAAACTTTGGTGAAATGCCAATCTAGTAATTCCAAAAATTATTCGCCTTCCGTTATGTCTGTTGATTGTGTTACTTCTGGATATAGTGGTGCATACCAACCAAATGGGCCTAGTTTTGTAGGGCCAAACGATCTTGGTAGGATGAGTTCTCAGAATGCTAACATGTTGGTTGGAACCCTGCAGCAGCAGCAACAATTGCATAAACAATATGAGCAACGGCAGGAGCAAAAACAACATCCACAACAGCCACAACAGCCACAACAGCCACAACAGCCACAACAGCAGTTAATGTCATCAGAGCCCAGCTGCTCAATCAATGTCCAGCCATCTTGCCTGGTTCTGCCCTCACATTCATCGGTCAATTTTCTTGCTGGAAACATTCCTGATTTTTCCAAACATAATCACAACATTAATAGGGGTACTATTATTGATTACAGCATTGCCTCAACTCAACGCGTCAGTTCATTGTCAAATTTTAACCAGACAGATGGGGATCTAAACCCTCATAATGCAATTAGTGGGTATTTGACTCAAATGTCAGGTTCTTCAGTGTCGTATTATTCGTTAAATGGTGCCAATAACTCTGTTGGTCACGTAGAAGCCTCCAGATTAACTTCTGCCGGCAGTCATTTACCTGGGGTTTCTCACAAGAAGACTGATATAAAGGGATTTTATGGCTCAAAATCAGAAGAAATGCTTGATCAAGGCCGTTTTAGGAACCTTGTATTTGTTGGTAAAGGGTCTTCTTCTCAAAGCCGATCTCCAGTTGAAGAGATTGTTTCACCAATGACTAATGAGCAACTTGACCATTGGAAAAATTATATGCCAAACCGTAGCAGGATGAAGCAGGAACCTCTCATAAAGTACGTAGAGAGTACAGAGGTGGGACTTCCGATACAAAAAGTTCTTCAATGA 2037 42.56 MATIQRVSQSSLGASPSNYGLSKSSGDGGGEAAVSDQFPAGLRVLVVDDDTTCLRIIEQMLLRCLYHVTMCSQAAVALNLLREKKGCFDVVLSDVHMPDMDGYKLLEYVGLEMDLPVIMMSADKRTSAVMKGIRHGACDYLIKPIREEELKNIWQHVVRKKWNEYKELENSGSLEENDKQIRGTDDAECASSAHEGEEGIMRATRKRSSSKEDDSELENDDPSASKKPRVVWSVELHQQFVSAVNQLGLDKAVPKRILELMNVPGLTRENVASHLQKFRLYLKRLSGVAQQQNAIPNIYCGPLEQNFKLDALGVEALAVSGQISPQTLAALHAELLGRSMCNLRPSMDQPAVLQGTLLGTKLIAVEHEPVDPFSQTLVKCQSSNSKNYSPSVMSVDCVTSGYSGAYQPNGPSFVGPNDLGRMSSQNANMLVGTLQQQQQLHKQYEQRQEQKQHPQQPQQPQQPQQPQQQLMSSEPSCSINVQPSCLVLPSHSSVNFLAGNIPDFSKHNHNINRGTIIDYSIASTQRVSSLSNFNQTDGDLNPHNAISGYLTQMSGSSVSYYSLNGANNSVGHVEASRLTSAGSHLPGVSHKKTDIKGFYGSKSEEMLDQGRFRNLVFVGKGSSSQSRSPVEEIVSPMTNEQLDHWKNYMPNRSRMKQEPLIKYVESTEVGLPIQKVLQ 678
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2406265 2410826 - Bda004904.1 Bda11g00187 15295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00187 678 PIRSF RR_ARR_type-B 22 669 IPR017053 GO:0003677|GO:0003700|GO:0009736
Bda11g00187 678 Pfam Response regulator receiver domain 44 152 IPR001789 GO:0000160
Bda11g00187 678 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 227 280 IPR006447 GO:0003677
Bda11g00187 678 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 38 497 - -
Bda11g00187 678 SMART REC_2 42 154 IPR001789 GO:0000160
Bda11g00187 678 CDD REC_typeB_ARR-like 44 158 - -
Bda11g00187 678 Pfam Myb-like DNA-binding domain 229 277 IPR001005 -
Bda11g00187 678 PANTHER TWO-COMPONENT RESPONSE REGULATOR 38 497 IPR045279 GO:0009736
Bda11g00187 678 MobiDBLite consensus disorder prediction 434 475 - -
Bda11g00187 678 SUPERFAMILY CheY-like 41 169 IPR011006 -
Bda11g00187 678 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 224 283 IPR017930 -
Bda11g00187 678 MobiDBLite consensus disorder prediction 1 24 - -
Bda11g00187 678 MobiDBLite consensus disorder prediction 176 225 - -
Bda11g00187 678 ProSiteProfiles Response regulatory domain profile. 43 158 IPR001789 GO:0000160
Bda11g00187 678 Gene3D - 223 286 - -
Bda11g00187 678 Gene3D - 42 178 - -
Bda11g00187 678 MobiDBLite consensus disorder prediction 1 32 - -
Bda11g00187 678 SUPERFAMILY Homeodomain-like 225 284 IPR009057 -
Bda11g00187 678 MobiDBLite consensus disorder prediction 450 475 - -
Bda11g00187 678 MobiDBLite consensus disorder prediction 176 226 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00918 Bda-Chr3:8109038 Bda11g00187 Bda-Chr11:2406265 2.99E-40 dispersed
Bda03g01158 Bda-Chr3:12761839 Bda11g00187 Bda-Chr11:2406265 5.44E-106 dispersed
Bda08g00304 Bda-Chr8:3176640 Bda11g00187 Bda-Chr11:2406265 4.81E-132 dispersed
Bda09g01515 Bda-Chr9:46870769 Bda11g00187 Bda-Chr11:2406265 9.43E-25 dispersed
Bda11g00074 Bda-Chr11:917530 Bda11g00187 Bda-Chr11:2406265 6.41E-94 dispersed
Bda11g00695 Bda-Chr11:6921384 Bda11g00187 Bda-Chr11:2406265 5.68E-24 dispersed
Bda01g01795 Bda-Chr1:54160869 Bda11g00187 Bda-Chr11:2406265 0 wgd
Bda11g00187 Bda-Chr11:2406265 Bda08g00081 Bda-Chr8:750110 2.61E-23 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16567 PF00072 Response_reg 9.50E-22 CL0304 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00187 - K14491 jre:109003013 712.99