Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00199 ATGATCGATAAAGACCCAAATGGAGTTCTATCGAATTGGCAGCTCCACAAGAATCCATGCACTTGGATTGGAGTTTCATGCTCGTCTGGGCGAGTAACTAAGCTCGATCTCAGCGGCTATAATCTCGACGGAACTCTCTCTTTTGATCCGTTTGTTGCTCTAAATACGCTGTCTGTTCTGAAATTGTCATCAAATTCGTTCATCATAAACTCAACAAATTTGCTTCAGCTTCCGGACAGTTTGCAGCAGCTCGAACTGTCTTTGGTTAGACTCGTCGGCAATGTTCCTCAAAATCTGTTCTCCAAATGTCCTAATCTTGTTTACGTAAACCTTGGATTCAACAATTTGACAGGGCCTTTGCCTGAAAATCTGCTGCTGAATTCTAACAAACTTCAGGCTCTTGATCTCTCTTACAACAATCTTAGCGGATCCATCTCTGGTTTGAAACTCGAACCTGATTCTTGCGGGGCTTTGTTGCATCTCGATCTTTCTGGAAATCGTTTAACGGGTTCGATCCCGATTGGCATTTCAAACTGCTCAAATCTTCAAACTCTGAGTTTATCGTATAATTTTCTGACAGAGGAAATTCCAGATTCTGTTGGGGAGCTAGACAGCCTGCAAAAGCTGGATCTCTCGCACAATCAGCTCACCGGCTGGATCCCTTCTGAGTGGGGAAACGCCTGCAATTCCCTCACCGAGCTTCGGCTTTCGTATAACAACATTTCGGGTCTGATTCCGTCTTCCTTCATTTCGTGTGATTTGCTGCAAGTTTTCGATCTTTCGAACAACAATATCTCGGGTCCTCTGCCATTTTCAATCTTTAAGAATCTTCTCTCACTAGAGAGCTTGCTTTTGAGTAATAACATTATATCTGGTCCATTTCCTGCATCTATATCATCTTGCAAGAAATTGCAGATTGTAGATTTGAGCTCCAACAAGATTTCAGGCACAATTCCACCCGATATCTGTCCTGGTGCAGGGTCGCTAGAGGATCTGAGAGTGCCGGATAATCTCATCACAGGGGGAATCCCATCTCAATTGGCTCTTTGCAAACAGCTTAAGACTATTGATTTCAGCCTCAACTATCTAAATGGATCAATTCCTCCAGAGTTAGGGGAGCTTGCGAATCTCGAACAGTTTACCGCTTGGTTCAACAGCTTGGAAGGGAAAGTCCCACCAGAGTTGGGAAAATGCAAGAGCCTGAAAAACCTCATTATCAACAACAACCGCCTCACCGGAGAAATTCCGGCTGAATTGTTCGGTTGCACTAATCTTGAATGGATTTCGCTCACAAGCAATGAGCTAACAGGTGAAGTGCCGAAGGAATTCGGGCTTCTGACGAGGCTGGCCGTTCTGCAGCTTGGGAATAATAGCTTAAGTGGGCAAATCCCAGGTGAGCTAGAGAATTGCAGCACTTTGGTTTGGCTGGACTTGAACAGCAATAAGCTTACCGGAGAGATTCCTCCTCGACTTGGAAGGCAGCCTGGAGCGAAATCGTTGAGCGGAATTCTCTCTGGAAACACTCTAGTTTTTGTTCGAAACGTGGGAAATTCATGTAAAGGAGTGGGAGGATTGCTCGAGTTTGCAGGGATTCGACCGGAAAGATTGTTGCAGGTCCCTACATTGAAAAGTTGTGATTTCACAAGACTCTATTCTGGTCCAGTTCTTAGCCTCTTCACAAAATATCAAACTCTGGAGTATCTGGATCTTTCTTACAACGAGCTACGAGGAAGAATTCCGGCAGAATTCGGGGACATGGTGGCCATGCAAGTTCTGGAATTATCCCACAATCAACTTTCCGGTGAGATCCCGGAATCACTCGGCCGCCTTAAAAACTTAGGCGTCTTTGATTCCTCTTATAACAGATTTCAAGGTCATATTCCTGATTCTTTCTCTAATCTATCGTTCTTGGTCCAAATTGACTTGTCAAACAATGAATTAACCGGCCAAATTCCGTCAAGAGGCCAGCTAAGTACACTTCCAGCGAGTCAGTATGCGAATAATCCAGGACTCTGTGGGGTTCCCTTGCCTGAGTGTGAGAATGAAGACCAACCATCCACGAACCCTAGCGAGGCGACATGGAAGGGAAGACGAAAGGCCGAAACTGCGTCTTGGGCGAATAGCATTGTAATGGGCGTACTCATTTCCGTCGCCTGCATTTGCATTTTGATAGTATGGGCAATCGCCATGCGAGCAAGACGGAGAGAGGTAGAGGAGGCCAAAATGCTTACGAGCTTGCAAGCGTCACACGCAGCCACTACATGGCAAATTGACAAAGAGAAAGAGCCCCTTAGCATTAACGTAGCCACTTTCCAGAGGCAGCTCAGGAAGCTCAAATTCTCCCAATTGATCGAGGCCACCAATGGGTTTTCAGCGGCCAGCCTCATCGGCAGCGGCGGATTCGGAGAAGTTTTCAAGGCGACATTGAAAGACGGGTCTAGCGTCGCCATCAAGAAGCTAATACGACTGAGCTGTCAAGGCGACCGGGAATTCATGGCCGAAATGGAAACTTTGGGAAAAATCAAGCATCGGAATCTCGTTCCTCTTCTGGGTTACTGCAAGGTAGGCCAAGAGCGGCTTCTGGTGTATGAATTCATGGAGTTTGGAAGCCTTGAAGAGATGCTGCACGGCCGTGCGAGAACACAAGAACAACGGATTCTGACATGGGAGGAGAGGAAAAAGATTGGAAGAGGAGCAGCGAAAGGGCTCTGCTTCCTTCACCATAATTGCATCCCACACATTATACACAGAGACATGAAGTCCAGCAACGTACTTTTGGACCATGAAATGGAGGCTAGAGTGTCCGATTTCGGCATGGCTAGGCTCATAAGCGCACTCGACACTCATCTGAGCGTAAGCACCCTCGCCGGAACCCCCGGCTATGTCCCACCGGAGTACTACCAGAGTTTCAGGTGCACGGCTAAAGGCGACGTCTATTCATTCGGCGTCGTCCTCTTGGAGCTCCTGACGGGGAAGCGGCCGACAGACAAGGAGGATTTCGGAGACACAAATCTGGTGGGGTGGGTGAAAATGAAGGTGAAAGAAGGAAAGCAAATGGAGGTCATAGACCCAGAATTGCTCTCCGTCAGCAAAGGAACGGCCGAAGCCGAGGCCGAAGAGGTCAAGGAAATGGTGCGTTACTTGGAGATAACTCTGCGGTGTGTTGAAGAATTGCCGTCCAGGCGACCAAATATGTTGCAGGTGGTGAGTCTGCTGCGCGAGCTGATGCCGGGATCGGCCAACGGGAGCAGCAACAGCGCTTGA 3264 47.7 MIDKDPNGVLSNWQLHKNPCTWIGVSCSSGRVTKLDLSGYNLDGTLSFDPFVALNTLSVLKLSSNSFIINSTNLLQLPDSLQQLELSLVRLVGNVPQNLFSKCPNLVYVNLGFNNLTGPLPENLLLNSNKLQALDLSYNNLSGSISGLKLEPDSCGALLHLDLSGNRLTGSIPIGISNCSNLQTLSLSYNFLTEEIPDSVGELDSLQKLDLSHNQLTGWIPSEWGNACNSLTELRLSYNNISGLIPSSFISCDLLQVFDLSNNNISGPLPFSIFKNLLSLESLLLSNNIISGPFPASISSCKKLQIVDLSSNKISGTIPPDICPGAGSLEDLRVPDNLITGGIPSQLALCKQLKTIDFSLNYLNGSIPPELGELANLEQFTAWFNSLEGKVPPELGKCKSLKNLIINNNRLTGEIPAELFGCTNLEWISLTSNELTGEVPKEFGLLTRLAVLQLGNNSLSGQIPGELENCSTLVWLDLNSNKLTGEIPPRLGRQPGAKSLSGILSGNTLVFVRNVGNSCKGVGGLLEFAGIRPERLLQVPTLKSCDFTRLYSGPVLSLFTKYQTLEYLDLSYNELRGRIPAEFGDMVAMQVLELSHNQLSGEIPESLGRLKNLGVFDSSYNRFQGHIPDSFSNLSFLVQIDLSNNELTGQIPSRGQLSTLPASQYANNPGLCGVPLPECENEDQPSTNPSEATWKGRRKAETASWANSIVMGVLISVACICILIVWAIAMRARRREVEEAKMLTSLQASHAATTWQIDKEKEPLSINVATFQRQLRKLKFSQLIEATNGFSAASLIGSGGFGEVFKATLKDGSSVAIKKLIRLSCQGDREFMAEMETLGKIKHRNLVPLLGYCKVGQERLLVYEFMEFGSLEEMLHGRARTQEQRILTWEERKKIGRGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDHEMEARVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSFGVVLLELLTGKRPTDKEDFGDTNLVGWVKMKVKEGKQMEVIDPELLSVSKGTAEAEAEEVKEMVRYLEITLRCVEELPSRRPNMLQVVSLLRELMPGSANGSSNSA 1087
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2542397 2545660 + Bda004918.1 Bda11g00199 15307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00199 1087 SUPERFAMILY L domain-like 11 322 - -
Bda11g00199 1087 Gene3D Transferase(Phosphotransferase) domain 1 866 1084 - -
Bda11g00199 1087 Gene3D - 504 560 - -
Bda11g00199 1087 ProSiteProfiles Leucine-rich repeat profile. 130 152 IPR001611 GO:0005515
Bda11g00199 1087 Gene3D Phosphorylase Kinase; domain 1 749 865 - -
Bda11g00199 1087 Pfam Protein tyrosine and serine/threonine kinase 794 1071 IPR001245 GO:0004672|GO:0006468
Bda11g00199 1087 Gene3D Ribonuclease Inhibitor 124 679 IPR032675 -
Bda11g00199 1087 Pfam Leucine Rich repeat 128 143 IPR001611 GO:0005515
Bda11g00199 1087 Pfam Leucine Rich repeat 300 316 IPR001611 GO:0005515
Bda11g00199 1087 ProSitePatterns Protein kinases ATP-binding region signature. 796 819 IPR017441 GO:0005524
Bda11g00199 1087 ProSiteProfiles Leucine-rich repeat profile. 230 251 IPR001611 GO:0005515
Bda11g00199 1087 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 1075 - -
Bda11g00199 1087 Pfam Leucine rich repeat 558 599 IPR001611 GO:0005515
Bda11g00199 1087 Pfam Leucine rich repeat 160 216 IPR001611 GO:0005515
Bda11g00199 1087 Pfam Leucine rich repeat 224 265 IPR001611 GO:0005515
Bda11g00199 1087 Pfam Leucine rich repeat 400 459 IPR001611 GO:0005515
Bda11g00199 1087 ProSitePatterns Serine/Threonine protein kinases active-site signature. 914 926 IPR008271 GO:0004672|GO:0006468
Bda11g00199 1087 Pfam Brassinosteroid receptor island domain 501 559 IPR045381 -
Bda11g00199 1087 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1 1075 - -
Bda11g00199 1087 SUPERFAMILY Protein kinase-like (PK-like) 771 1072 IPR011009 -
Bda11g00199 1087 Pfam Leucine rich repeat N-terminal domain 2 28 IPR013210 -
Bda11g00199 1087 Gene3D Ribonuclease Inhibitor 2 100 IPR032675 -
Bda11g00199 1087 ProSiteProfiles Protein kinase domain profile. 790 1076 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g00199 1087 SUPERFAMILY L domain-like 228 675 - -
Bda11g00199 1087 SMART serkin_6 790 1076 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g00199 1087 PRINTS Leucine-rich repeat signature 131 144 - -
Bda11g00199 1087 PRINTS Leucine-rich repeat signature 203 216 - -
Bda11g00199 1087 SMART LRR_typ_2 155 179 IPR003591 -
Bda11g00199 1087 SMART LRR_typ_2 203 226 IPR003591 -
Bda11g00199 1087 SMART LRR_typ_2 228 251 IPR003591 -
Bda11g00199 1087 SMART LRR_typ_2 446 470 IPR003591 -
Bda11g00199 1087 SMART LRR_typ_2 586 610 IPR003591 -
Bda11g00199 1087 SMART LRR_typ_2 398 422 IPR003591 -
Bda11g00199 1087 SMART LRR_typ_2 301 325 IPR003591 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00060 Bda-Chr5:3492559 Bda11g00199 Bda-Chr11:2542397 2.32E-33 dispersed
Bda09g00563 Bda-Chr9:7556454 Bda11g00199 Bda-Chr11:2542397 1.10E-81 dispersed
Bda10g00344 Bda-Chr10:34019536 Bda11g00199 Bda-Chr11:2542397 0 dispersed
Bda11g00199 Bda-Chr11:2542397 Bda04g00148 Bda-Chr4:4062338 9.84E-155 dispersed
Bda11g00199 Bda-Chr11:2542397 Bda03g01111 Bda-Chr3:11359984 5.61E-155 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69887 PF00069 Pkinase 1.60E-43 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00199 - - csv:101208987 1809.65