Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00200 ATGGCGACCATGAACTCCACCATTTTGTCTTGCAACTACGCCATTGCAGGCGCTGGACAGTCCGAGCTCGGCGCCAAGCTCAATTCAAGTCCGTCGATTGCTTCGCCTATCGGGTCTTCTGCTCAGAAACTGCCTGCTATCAGAGCACAACAAGCTATGGTTTCGAATGACCAAGGATCAAAAGGTAGAGAAGGAAGAAGGGCTGCTCTTGCTTTACTCGCTGCCACAATTTTTGCTTCCGCTTCTAACTCCTCTGCAAATGCTGGGATTATTGATGACTACCTCGAGAAGAGTAAAGCCAACAAAGAGCTGAATGACAAGAAAAGGCTGGCAACTAGTGGAGCAAACTTTGCAAGAGCGTACACAGTTCAGTTTGGGACTTGCAAGTTCCCGGAAAATTTCACCGGCTGCCAAGATCTGGCCAAGCAAAAGAAAGTTCCATTCTTGAGTGATGATTTGGAGCTGGAATGTGAAGGTAAAGACAAATACAAGTGTGGTTCCAATGTTTTCTGGAAATGGTGA 522 46.93 MATMNSTILSCNYAIAGAGQSELGAKLNSSPSIASPIGSSAQKLPAIRAQQAMVSNDQGSKGREGRRAALALLAATIFASASNSSANAGIIDDYLEKSKANKELNDKKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFLSDDLELECEGKDKYKCGSNVFWKW 173
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2555542 2556263 + Bda004919.1 Bda11g00200 15308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00200 173 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 1 173 IPR008796 GO:0009522|GO:0015979
Bda11g00200 173 Pfam Photosystem I reaction centre subunit N (PSAN or PSI-N) 44 173 IPR008796 GO:0009522|GO:0015979
Bda11g00200 173 Gene3D - 89 173 IPR044907 -
Bda11g00200 173 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 1 173 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g00200 Bda-Chr11:2555542 Bda11g01386 Bda-Chr11:17288313 7.50E-86 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00200 K02701 - tcc:18611871 256.144