Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00222 ATGGCTTCAGAGGATGTCAAACGGAGTGAATCTGCGGTGTCGACGATAGTGAACCTGGCTGAGGAGGCTAAGCTGGCTAGAGAGGGTGTTAAGGCTCCTAGCTATGCCGTCCTCAGTATCTGCAAATCTCTACTCGCTGGTGGAGTCGCCGGTGGTGTGTCACGCACAGCCGTTGCACCTCTGGAACGGTTGAAAATATTATTGCAGCAGGTTCAGAATCCCCATAACATTAAATATAATGGAACAGTTCAAGGCTTGAAGTACATATGGAGATCTGAAGGTTTCCGTGGGCTATTCAAAGGCAATGGCACCAATTGTGCTCGTATTGTCCCAAACTCAGCGGTCAAGTTCTTCAGCTACGAGCAGGCTTCTGAGGGCATATTGTATCTGTACAGGCAGCAAACTGGTAACGAAGATGCTCAGCTCACTCCTCTCTTACGACTTGGGGCTGGAGCCTGTGCTGGGATTATCGCCATGTCTGCGACTTACCCAATGGATATGGTACGAGGGAGACTAACTGTTCAGACAGACAAGTCCCCTTACCAGTACAGAGGAATATATCATGCTCTGTCAACCGTGCTACGTGAAGAAGGTCCACGGGCTTTGTACAAGGGTTGGCTTCCATCTGTAATTGGCGTTATTCCATATGTGGGTCTCAACTTTGCTGTGTACGAGTCTCTGAAGGACTGGTTAGTTAAAAGTAGGCCATTTGGATTTATTGAAGATTCTGAGTTGAGTGTCACCACAAAGCTAGCATGTGGGGCTGCTGCTGGAACTGTGGGACAAACTGTTGCATACCCTCTTGATGTTATTCGAAGAAGAATGCAGATGGTGGGCTGGAATCATGCTTCTTCTGTTGTCGTTGGTGATGGGAGGAGCAAGTCACTTGAATACACTGGCATGGTTGATGCATTTAGAAAAACAGTTCGGCATGAGGGTTTTGGAGCTCTATACAAGGGTCTGGTCCCCAATTCTGTGAAGGTTGTCCCATCTATTGCAATTGCATTTGTGTCGTATGAAATGGTGAAGGACATTTTAGGGGTGGAGATCAGAATATCAGAC 1062 47.46 MASEDVKRSESAVSTIVNLAEEAKLAREGVKAPSYAVLSICKSLLAGGVAGGVSRTAVAPLERLKILLQQVQNPHNIKYNGTVQGLKYIWRSEGFRGLFKGNGTNCARIVPNSAVKFFSYEQASEGILYLYRQQTGNEDAQLTPLLRLGAGACAGIIAMSATYPMDMVRGRLTVQTDKSPYQYRGIYHALSTVLREEGPRALYKGWLPSVIGVIPYVGLNFAVYESLKDWLVKSRPFGFIEDSELSVTTKLACGAAAGTVGQTVAYPLDVIRRRMQMVGWNHASSVVVGDGRSKSLEYTGMVDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVSYEMVKDILGVEIRISD 354
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2727681 2732056 + Bda033014 Bda11g00222 15330

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00222 354 ProSiteProfiles Solute carrier (Solcar) repeat profile. 245 345 IPR018108 -
Bda11g00222 354 ProSiteProfiles Solute carrier (Solcar) repeat profile. 38 126 IPR018108 -
Bda11g00222 354 PANTHER BNAA09G39370D PROTEIN 1 349 - -
Bda11g00222 354 Gene3D Mitochondrial carrier domain 36 348 IPR023395 -
Bda11g00222 354 Pfam Mitochondrial carrier protein 142 234 IPR018108 -
Bda11g00222 354 Pfam Mitochondrial carrier protein 39 125 IPR018108 -
Bda11g00222 354 Pfam Mitochondrial carrier protein 244 346 IPR018108 -
Bda11g00222 354 SUPERFAMILY Mitochondrial carrier 38 341 IPR023395 -
Bda11g00222 354 PRINTS Mitochondrial carrier protein signature 56 70 IPR002067 GO:0055085
Bda11g00222 354 PRINTS Mitochondrial carrier protein signature 254 276 IPR002067 GO:0055085
Bda11g00222 354 PRINTS Mitochondrial carrier protein signature 157 175 IPR002067 GO:0055085
Bda11g00222 354 PRINTS Mitochondrial carrier protein signature 203 221 IPR002067 GO:0055085
Bda11g00222 354 PRINTS Mitochondrial carrier protein signature 101 121 IPR002067 GO:0055085
Bda11g00222 354 PRINTS Mitochondrial carrier protein signature 43 56 IPR002067 GO:0055085
Bda11g00222 354 PANTHER SOLUTE CARRIER FAMILY 25 1 349 - -
Bda11g00222 354 ProSiteProfiles Solute carrier (Solcar) repeat profile. 142 230 IPR018108 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00222 K14684 SLC25A23S; solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41 - csv:101215644 642.884
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g02021 Bda-Chr1:56536860 Bda11g00222 Bda-Chr11:2727681 8.10E-60 dispersed
Bda06g01299 Bda-Chr6:43623888 Bda11g00222 Bda-Chr11:2727681 5.03E-30 dispersed
Bda07g01017 Bda-Chr7:11991688 Bda11g00222 Bda-Chr11:2727681 4.95E-06 dispersed
Bda08g00627 Bda-Chr8:6428359 Bda11g00222 Bda-Chr11:2727681 6.08E-15 dispersed
Bda11g00222 Bda-Chr11:2727681 Bda13g01905 Bda-Chr13:43395392 2.13E-64 dispersed
Bda14g00278 Bda-Chr14:1864505 Bda11g00222 Bda-Chr11:2727681 8.55E-41 dispersed
Bda11g00222 Bda-Chr11:2727681 Bda01g01046 Bda-Chr1:44575451 3.44E-65 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g251 . Blo16g01047 . Bda11g00222 Bpe13g01324 . . . Cmo04g01612 Cmo18g01069 . Cma18g01050 Car04g01590 Car18g00975 Sed06g1858 Cpe09g00269 Cpe01g01369 Bhi07g01378 Tan04g0905 Cmetu10g1207 Lac13g0451 Hepe10g1864 . . . . . . . . . Cone13ag0861 Cone19ag0861 . . . Csa05g02076 Chy10g01109 Cme10g00298 . . . Bda11g00222 . . . Bma06g00775 . . . . Cma15g01418 . Car15g01280 Cpe13g00031 . Bhi12g00819 . . . . . Lcy10g0877 Cla01g00560 Cam01g0583 Cec01g0575 Cco01g0599 Clacu01g0578 Cmu01g0549 Cre09g1958 Lsi09g00609 . . .
Vvi15g759 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone11ag0478 Cone18ag1031 . . . . . Blo16g00458 Bda11g00222 . Bpe13g00974 . . Bma06g01167 . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003572 1 1 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 4 2 1 1 2 2 2 2 1 2 2 4 2 47
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda11g00222 Bda_Chr11 FPKM 0.37234 0.0 0.0 0.0 0.0 0.0 1.147293 0.0 0.259513