Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00226 ATGGGGAGCAGCGAAGAAGGAAAATCTTCCAAATCGGAAAAATCATCTTCACCATCACATCCCCAGGATCAGACAAATCCAGCTCAGCAAGCTAATATGCAACTCTATCCTGACTGGGCAGCCTTGCAGGCATACTATGGTCCTAGAGTTACACTTCCACCATATTACAACTCGGCTGTGGCTTCAGGTCATGCTCCGCATCCTTACATGTGGGGGCCACCTCAGGCCATGATGTCGCCTTATGGAGCACCCTATGCAGCAATTTACTCACATGGAAGTGTGTATGCCCATCCAGCTGTAACTCTTACTGCTGGAACTCCTTTGAATGCTGAAACTCCGAAGTCCACCGGAAACACAAATGGAGGTCTGATGAAAAAACTAAAAAGGTTTGATGGACTCGCAATGTCAATAGGCAATGGTAATTCCCAGAATGTAGATGGTGGAGTAGAAAATATGCTGTCGCAGAGTGGAGAAACGGATGGTTCAAGTGATGGAAGTGATGTTAACATGGCCATGGCTAGTCAACCAAGAAGGAAAAGAAGCAGAGAAGGAACACCAACTCCCGGCAAGGATGAGAAAAGTGAGTCACAGGACACTTCGGTTATTGCTGGGGAGATAACTGGGGCTTCTGATAAGATAGTAGGCACACCTATTACCTCTTGTGTGATGGGAAAATTAATCGGACCTCTGGGTTCGCCTACAATGTCAACTGCTTTGGAGCTCAAGAACCCTGTTAGTACGAATATGATAACTGCGGCCACTGTTCCTCAAACTTGTCCTGTATTGCCTGAAAATTGGATGCAGAATGAAAGAGAACTAAAACGTGAAAGGAGAAAACAATCTAATAGAGAATCTGCTAGGCGGTCAAGGTTGAGGAAACAGGCTGAAACTGAGGAGCTAGCACAGAAGGTTGATTCCATGACGGCTGAAAACGAGGCCATTAGATCTGAAATTAATCGTTTGACTGAAAAATCAGGGAAACTCAAGCAAGAAAATGTCGCCCTATTGGAGAAACTTAAAACTGTGCAAACTGGACGAAGAAAAGATGTTACTACCGAGAAGGCAGAAAATCTACTATCAAGAGTAAACAATTCAGATTCAGTGGAAAGAAGCATTGACGATGAGAATAACATGTACAAAAAATCCTCAAATTCTAACGTGAAGCTGCGACAACTCTTGGGTGCAAGTCCGAGGACGGATGCTGTGGCTGCCGGATGA 1218 44.83 MGSSEEGKSSKSEKSSSPSHPQDQTNPAQQANMQLYPDWAALQAYYGPRVTLPPYYNSAVASGHAPHPYMWGPPQAMMSPYGAPYAAIYSHGSVYAHPAVTLTAGTPLNAETPKSTGNTNGGLMKKLKRFDGLAMSIGNGNSQNVDGGVENMLSQSGETDGSSDGSDVNMAMASQPRRKRSREGTPTPGKDEKSESQDTSVIAGEITGASDKIVGTPITSCVMGKLIGPLGSPTMSTALELKNPVSTNMITAATVPQTCPVLPENWMQNERELKRERRKQSNRESARRSRLRKQAETEELAQKVDSMTAENEAIRSEINRLTEKSGKLKQENVALLEKLKTVQTGRRKDVTTEKAENLLSRVNNSDSVERSIDDENNMYKKSSNSNVKLRQLLGASPRTDAVAAG 405
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2763032 2766426 - Bda004946.1 Bda11g00226 15334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00226 405 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 405 IPR044827 GO:0003700|GO:0006355|GO:0043565
Bda11g00226 405 Pfam G-box binding protein MFMR 1 100 IPR012900 -
Bda11g00226 405 Coils Coil 297 338 - -
Bda11g00226 405 MobiDBLite consensus disorder prediction 138 170 - -
Bda11g00226 405 CDD bZIP_plant_GBF1 275 324 IPR045314 GO:0003700|GO:0006355
Bda11g00226 405 MobiDBLite consensus disorder prediction 271 305 - -
Bda11g00226 405 MobiDBLite consensus disorder prediction 1 33 - -
Bda11g00226 405 Gene3D - 273 326 - -
Bda11g00226 405 PANTHER G-BOX-BINDING FACTOR 3 1 405 - -
Bda11g00226 405 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 272 335 IPR004827 GO:0003700|GO:0006355
Bda11g00226 405 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 277 292 IPR004827 GO:0003700|GO:0006355
Bda11g00226 405 MobiDBLite consensus disorder prediction 176 198 - -
Bda11g00226 405 MobiDBLite consensus disorder prediction 271 309 - -
Bda11g00226 405 SUPERFAMILY Leucine zipper domain 273 330 IPR046347 GO:0003700|GO:0006355
Bda11g00226 405 SMART brlzneu 270 334 IPR004827 GO:0003700|GO:0006355
Bda11g00226 405 Pfam bZIP transcription factor 270 332 IPR004827 GO:0003700|GO:0006355
Bda11g00226 405 MobiDBLite consensus disorder prediction 138 199 - -
Bda11g00226 405 MobiDBLite consensus disorder prediction 14 33 - -
Bda11g00226 405 Pfam Disordered region downstream of MFMR 122 249 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda08g00119 Bda11g00226 CCT
Bda08g00119 Bda11g00226 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01002 Bda-Chr3:9155968 Bda11g00226 Bda-Chr11:2763032 4.89E-107 dispersed
Bda07g00057 Bda-Chr7:849594 Bda11g00226 Bda-Chr11:2763032 3.15E-30 dispersed
Bda10g00121 Bda-Chr10:3166845 Bda11g00226 Bda-Chr11:2763032 1.47E-49 dispersed
Bda11g00226 Bda-Chr11:2763032 Bda10g01117 Bda-Chr10:45159302 1.19E-08 dispersed
Bda11g00226 Bda-Chr11:2763032 Bda08g00119 Bda-Chr8:1014806 4.46E-111 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16570 PF16596 MFMR_assoc 2.90E-22 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00226 K09060 - jre:108996456 473.781