Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00236 ATGGAAGACGATTGGGATCTTCACGCCGTCGTCAGAGGCTGTAACGCCACAGCCACAGCCACAACGACCATTTCTTCTGCTGCTTCTTTCTCTGCTTCCATTGCTGCGTTGACTTCTCAAGCTTTTGCATCAGATTCTCCTGGCTCTGTCTTCTCCACTTTCAGTAGAGAGAAAACTGGTCAGTTTTTCTCCGTTCAAGATCCGTTTGAAGGAAGAAACTACGACGAGGAGTTGCATGAGCTTTACAAGCCTTTCTTCCCCAAATCTCCGGTGACGGAGCAGCCTCGGCCGATTTCTTCTCCGGCGACGGCGGTCTCTCAGTTTTCTTTTCCGACAGCGTCGAAAGCTCAAATCCACCAAAAGCAGAGCCATGGAGGATCTGCAACCGCCCCTCGGACCAAACGAAGAAAGAACCAAATGAAGAACGTTTGTCAAGTACCAGCAGAGAGTCTTTCTTCAGATATATGGGCGTGGCGGAAATATGGGCAAAAACCCATAAAAGGCTCTCCATATCCAAGGGGGTATTACAGATGTAGCAGCTCAAAGGGGTGTTTGGCCCGGAAACAAGTGGAGCGGAACAGATCCGACCCGGAGATGTTCATCGTCACCTACACGGCCGAACATAACCACCCTGCTCCGACGCACCGGAACTCACTCGCCGGTTCTACGCGTCAAAAGACCTCGACCGCCGCATCCGTATCATCATCTGACCAGAAGAAAAGCGAATCCGAACTACCCGATTTCTCCTCCTCACCATCGTCGGAAGACGGCGGTGCACCCCGGAGTACTACGGCTGAAAGCAAGGAAGAGAAGAAGGATTTGGCTGGAGACGAAGAAGACGAATTTGGGGCGTCGAAGATGGTCTGGAACGACGATTTCTTTGTGGGGTTTGAGGAGCTTGACAGTCCGGCTACCGGAGACAGCTTTTACGACAACTTCCCGGCCAACCTTAATGTTTCTTGGATGGTCACATAG 975 51.59 MEDDWDLHAVVRGCNATATATTTISSAASFSASIAALTSQAFASDSPGSVFSTFSREKTGQFFSVQDPFEGRNYDEELHELYKPFFPKSPVTEQPRPISSPATAVSQFSFPTASKAQIHQKQSHGGSATAPRTKRRKNQMKNVCQVPAESLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNRSDPEMFIVTYTAEHNHPAPTHRNSLAGSTRQKTSTAASVSSSDQKKSESELPDFSSSPSSEDGGAPRSTTAESKEEKKDLAGDEEDEFGASKMVWNDDFFVGFEELDSPATGDSFYDNFPANLNVSWMVT 324
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2806716 2807901 - Bda004956.1 Bda11g00236 15344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00236 324 SUPERFAMILY WRKY DNA-binding domain 150 213 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda11g00236 324 MobiDBLite consensus disorder prediction 210 261 - -
Bda11g00236 324 MobiDBLite consensus disorder prediction 207 283 - -
Bda11g00236 324 Gene3D WRKY domain 136 206 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda11g00236 324 MobiDBLite consensus disorder prediction 113 142 - -
Bda11g00236 324 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 317 - -
Bda11g00236 324 MobiDBLite consensus disorder prediction 262 283 - -
Bda11g00236 324 Pfam WRKY DNA -binding domain 154 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda11g00236 324 ProSiteProfiles WRKY domain profile. 147 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda11g00236 324 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 317 IPR044810 GO:0003700
Bda11g00236 324 MobiDBLite consensus disorder prediction 113 129 - -
Bda11g00236 324 SMART WRKY_cls 152 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda03g00997 Bda11g00236 CCT
Bda03g00997 Bda11g00236 ECH
Bda11g00236 Bda13g00357 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda10g00663 Bda-Chr10:40760190 Bda11g00236 Bda-Chr11:2806716 1.11E-33 dispersed
Bda11g00236 Bda-Chr11:2806716 Bda14g00771 Bda-Chr14:5895742 1.21E-32 dispersed
Bda13g01302 Bda-Chr13:35252857 Bda11g00236 Bda-Chr11:2806716 7.49E-28 dispersed
Bda01g00096 Bda-Chr1:14103898 Bda11g00236 Bda-Chr11:2806716 8.22E-43 transposed
Bda02g00486 Bda-Chr2:45736800 Bda11g00236 Bda-Chr11:2806716 2.07E-44 transposed
Bda03g00571 Bda-Chr3:4780283 Bda11g00236 Bda-Chr11:2806716 1.60E-36 transposed
Bda03g00997 Bda-Chr3:9079697 Bda11g00236 Bda-Chr11:2806716 9.92E-93 transposed
Bda11g00236 Bda-Chr11:2806716 Bda13g00357 Bda-Chr13:4459365 1.24E-168 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16571 PF03106 WRKY 1.80E-25 CL0274 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00236 K13425 - csv:101217082 342.813