Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda11g00250 | TTTTCATTAATGGCTCTTGTCAATCCTATTTTGCCCTCTGTGCCTGCGATTATGTATCCTGACATCTCAGAAATAATGGCTACTGGAAGCTTAGAGATCTTGGAGCGGCCACTTTCGTCTATTATCGAAGATATTGTTTATGTTGCGGTTGGAAAACAAGTGAAAGAGAGCAAGCTCACTTTGATTTATGCTCTGCAAAACTCAGGTGGGAAGAAGATCTGCATCATTCATGTCCATGAACCTGCCCATATGATACCCTTAATGGGAACAAGGTTTCCAGCAAACACATTGAAGGACCAGGAAGTGAGAGCTTACCGAGAAATTGAGAGACAGAGCATGCATAAGGTCCTCGATGAGTATCTTCTTCTCTGCCGTCGCACTGGGGCTCGGGCAGAGAAACAATATACTGAATCCGATAGCATTGAGAAGGGAATTATTGAACTCATTTCTCAGTTTGGGATTCGAAAACTTGTGATGGGAGCTGCCGCAGATAAACACTATTCAAGGAGAATGGTTGATATTAGATCAAGGAAAGCCAATTATGTTCGCTTGCAAGCTCCAGATTTTTGTCACATCCAATTTATTTGCAAGGGAAACCTTATTCACACCAGGGAAGGTAATCAACATGGAGCATGTGCGCAAGCTGTATCTCCTCCATCAGTTGCACCAGTTCTATCGCCATCTGTACCACCAAGCCTGATCCCCCAAGCCTCACACAGCCACTGGAGATCATTATCCGCCTCAGTTGCACCTATCAATGGAATGAAAAATGGTAATTATCCAAGAGCAAAATCCATGCATGGCGATTATGCAAGGGGGAACATAATTCATCCTGATTCTCCAGTTATTGACGTTCTTCAAAGTCCAATGGGGTCTCCTCACCGGGCTTTGGAAGATTATGATCGATTATTTCGGAGAAGCCCTTCTGAGCATTCAGTTGCTACATCAGCTTCTTGTAGTGGAGAAAATGATATCATGCAAAATTATAAAATTTCATCATGTTTTCAGGATGAATGCACAGATGAAAATCTTTATGAACAACTTAAACAGACAATTACAGAAGCCACAAATGCCAAGCGTGAAGCTTTTGACGAGGCCCAAAGACGTGGACATGCTGAAAAAGATGCCATTGATGCTATACGCAGGGCTAGAGTTGCAGAAAGTTTATATGCCGTGGAGTTGAGACAAAAGAAAGAACTTGAAGATGCACTAGCAGAAGAGAAGGAAAAACTCAATGACATGAAGAATCAATGTGAAAAAGTAATGGAAGAACTCAGAATTTCTCAAATGCGAAGGTCAAGTCTTGAGAACCAAATTGCAGAATCTGATCAGACTGCTAAGGAGTTGGAACAAAAAATTATTTCTGCTGTTGACCTGTTAACAAAATACAAAATCGAACGAGATGAGTTACAGAGGCTGCGGGACAGTGCTCTAAGTGAAGCACAGGAGCTTAGGAGAGCACTTGGAGAGAACTCGAGCACGCGCATGCCCCAGTTCTTTTCTGAGTTCTCATTTTCAGAAATTGAAGTGGATGTATTGAGTAAGATGAGACATCCAAATCTCGTCACCCTCATTGGAGCTTGCCCAGAAGCCTGGATTCTAGTCTATGAATATCTTTCAAACGGAAGCCTTGAAGATAGGCTGAGCTGCAAGGATAATAGTCCGCCATTATCATGGAAATGTCGAATTCGCATTGCCACAGAGTTGTGCTCGGCCATTATGTTTCTTCACTCAGGTAAACCCCACAGCATAATTCATGGTGATTTGAAACCTGCAAATTTATTACTTGATTCTAATTATGGCTGCAAAGTGGGAGACTTTGGAATCTGTCGCCTCGTTACTCATAACAATGGGTCAAGCAACAATGTGACTCATATTTACCAAACTGACCCTAAGGGAACTTTTGCATACATGGATCCAGAGTTTGTTTCGACAGGGGAGCTTACTGTAAAATCCGATGTGTATTCGTTTGGAATCATATTACTACGGCTACTGACAGGAAGATCAGCCTTGAGGATAGCAAAGGAAGTTCAATATGCATTGGAAAATGGAAATTTGAAAACCCTTTTAGATCCTTTAGCCGGAGACTGGCCATTTGTGCAGGCCGAGCAGTTGGCTCGTTTGGCACTTAGATGTTGTGATGTAAATCGTCGAAGCAGACCAGACCTTGCGGTGGATGTTTGGAAAGTACTTGAGCCTATGAAAGCCTCGTGCGGGGGCTCTTTGTCATTTAGTTTGGGTTCTGATGAGCATTTTCAACCTCCTGGCTATTTTATTTGTCCAATCTTTCAGGAAGTTATGCAGGATCCGCAAGTGGCTGCAGATGGTTTTACATACGAAGCAGAGGCTTTGAAAGGATGGCTGGAGAGCGGGCATGACACTTCGCCAATGACAAACCTTAAGCTTGAAAACTCCACTCTCATTCCCAATCGCGCTCTGCGATCTGCAATTCAAGAATGGCTACAAAACCGTTAA | 2475 | 42.91 | FSLMALVNPILPSVPAIMYPDISEIMATGSLEILERPLSSIIEDIVYVAVGKQVKESKLTLIYALQNSGGKKICIIHVHEPAHMIPLMGTRFPANTLKDQEVRAYREIERQSMHKVLDEYLLLCRRTGARAEKQYTESDSIEKGIIELISQFGIRKLVMGAAADKHYSRRMVDIRSRKANYVRLQAPDFCHIQFICKGNLIHTREGNQHGACAQAVSPPSVAPVLSPSVPPSLIPQASHSHWRSLSASVAPINGMKNGNYPRAKSMHGDYARGNIIHPDSPVIDVLQSPMGSPHRALEDYDRLFRRSPSEHSVATSASCSGENDIMQNYKISSCFQDECTDENLYEQLKQTITEATNAKREAFDEAQRRGHAEKDAIDAIRRARVAESLYAVELRQKKELEDALAEEKEKLNDMKNQCEKVMEELRISQMRRSSLENQIAESDQTAKELEQKIISAVDLLTKYKIERDELQRLRDSALSEAQELRRALGENSSTRMPQFFSEFSFSEIEVDVLSKMRHPNLVTLIGACPEAWILVYEYLSNGSLEDRLSCKDNSPPLSWKCRIRIATELCSAIMFLHSGKPHSIIHGDLKPANLLLDSNYGCKVGDFGICRLVTHNNGSSNNVTHIYQTDPKGTFAYMDPEFVSTGELTVKSDVYSFGIILLRLLTGRSALRIAKEVQYALENGNLKTLLDPLAGDWPFVQAEQLARLALRCCDVNRRSRPDLAVDVWKVLEPMKASCGGSLSFSLGSDEHFQPPGYFICPIFQEVMQDPQVAADGFTYEAEALKGWLESGHDTSPMTNLKLENSTLIPNRALRSAIQEWLQNR | 824 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 2944523 | 2949967 | + | Bda004973.2 | Bda11g00250 | 15358 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda11g00250 | 824 | Pfam | Protein kinase domain | 509 | 722 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda11g00250 | 824 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 584 | 596 | IPR008271 | GO:0004672|GO:0006468 | |
Bda11g00250 | 824 | Pfam | U-box domain | 755 | 823 | IPR003613 | GO:0004842|GO:0016567 | |
Bda11g00250 | 824 | CDD | RING-Ubox_WDSUB1_like | 758 | 799 | - | - | |
Bda11g00250 | 824 | PANTHER | OS02G0152300 PROTEIN | 41 | 509 | - | - | |
Bda11g00250 | 824 | Coils | Coil | 345 | 365 | - | - | |
Bda11g00250 | 824 | SMART | serkin_6 | 433 | 734 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda11g00250 | 824 | PANTHER | U-BOX DOMAIN-CONTAINING PROTEIN 33 | 509 | 820 | - | - | |
Bda11g00250 | 824 | CDD | STK_N | 45 | 198 | - | - | |
Bda11g00250 | 824 | ProSiteProfiles | Protein kinase domain profile. | 467 | 735 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda11g00250 | 824 | PANTHER | OS02G0152300 PROTEIN | 509 | 820 | - | - | |
Bda11g00250 | 824 | SUPERFAMILY | RING/U-box | 748 | 822 | - | - | |
Bda11g00250 | 824 | SMART | Ubox_2 | 757 | 820 | IPR003613 | GO:0004842|GO:0016567 | |
Bda11g00250 | 824 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 753 | 824 | IPR013083 | - | |
Bda11g00250 | 824 | Gene3D | Transferase(Phosphotransferase) domain 1 | 543 | 740 | - | - | |
Bda11g00250 | 824 | SUPERFAMILY | Protein kinase-like (PK-like) | 507 | 723 | IPR011009 | - | |
Bda11g00250 | 824 | ProSiteProfiles | U-box domain profile. | 753 | 824 | IPR003613 | GO:0004842|GO:0016567 | |
Bda11g00250 | 824 | Gene3D | Phosphorylase Kinase; domain 1 | 482 | 542 | - | - | |
Bda11g00250 | 824 | Coils | Coil | 390 | 487 | - | - | |
Bda11g00250 | 824 | PANTHER | U-BOX DOMAIN-CONTAINING PROTEIN 33 | 41 | 509 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda11g00250 | Bda-Chr11:2944523 | Bda11g01037 | Bda-Chr11:10117529 | 3.75E-83 | dispersed | |
Bda09g01505 | Bda-Chr9:46821234 | Bda11g00250 | Bda-Chr11:2944523 | 5.72E-147 | transposed | |
Bda09g01575 | Bda-Chr9:47251319 | Bda11g00250 | Bda-Chr11:2944523 | 5.86E-09 | transposed | |
Bda11g01639 | Bda-Chr11:50355917 | Bda11g00250 | Bda-Chr11:2944523 | 2.00E-15 | transposed | |
Bda14g00799 | Bda-Chr14:6159525 | Bda11g00250 | Bda-Chr11:2944523 | 3.49E-15 | transposed | |
Bda11g00250 | Bda-Chr11:2944523 | Bda05g00084 | Bda-Chr5:4040675 | 9.47E-169 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69888 | PF00069 | Pkinase | 3.00E-32 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda11g00250 | - | - | mnt:21395628 | 941.799 |