Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00256 TCGTTTCCAATGACATCTGGGTCTGGTTCTTTAGCTGCCCCAAACATCATTGGGGTATCCACCTATGGCGGACGATACATTCAGTACAACGTGTACGGGAATCTCTTTGAAGTTTCCAGTAAGTACGTACCGCCTATTCGACCGCTTGGGAGGGGTGCTTATGGTATTGTCTGTGCTGCTGTGAATTTGGAGACAAGAGAGGAGGTGGCCATCAAGAAGGTTGGTAATGCATTTGACAACAGAATAGATGCCAAAAGGACTTTGCGAGAAATTAAACTTCTTCTGCACATGGATCATGAAAATGTCATTGCCATTAAAGATATTATACGACCTCCAGTGGTAGAAAACTTTAATGATGTGTACGTGGTTTATGAGCTGATGGACACAGATCTCCATCAGATAATAAGATCGAATCAACCGTTGACAGATGATCATTGCCGGTATTTTCTGTACCAGTTGTTACGAGGGCTAAAATACGTCCATTCTGCCAATGTTCTGCATCGTGATCTAAAGCCCAGCAATTTATTTCTGAATGCAAACTGTGACCTTAAGATTGGAGACTTTGGGCTTGCAAGGACAACATCTGAGACAGATTTCATGACTGAATATGTTGTAACTCGGTGGTACCGTGCACCGGAATTGCTCCTTAATTGTTCAGAATACACAGGAGCAATTGATATTTGGTCGGTAGGATGTATATTAGCTGAAATCAACACGAGACAACCACTCTTTCCGGGCAGAGACTATATTCATCAGCTCAAACTCATCACCGAGCTGATTGGTTCACCGGACGATTCTAGCCTTGGATTCTTACGAAATGATAGTACACGAAGATATGTTCGACAACTTCCTCAGCATCCAATGCAACAATTTTCCTCTCGATTTCCAACTATGTCACCTGGAGCCGCTGATTTACTAGCGAAGATGCTCGTATTCGATCCGAGCAAACGCATCACTGTCGAAGAGGCGCTTTGTCACCCATACATGGCTTCTCTTCACGATATCAATGAGGAACCAGTCTGTCCAAGGCCATTCAGTTTTGATTTTGAGCAGCCTTCGTATACAGAAATAAACATCAAAGAGCTCATATGGAGGGAGTCTGTCAGGTTCAATCCC 1116 43.55 SFPMTSGSGSLAAPNIIGVSTYGGRYIQYNVYGNLFEVSSKYVPPIRPLGRGAYGIVCAAVNLETREEVAIKKVGNAFDNRIDAKRTLREIKLLLHMDHENVIAIKDIIRPPVVENFNDVYVVYELMDTDLHQIIRSNQPLTDDHCRYFLYQLLRGLKYVHSANVLHRDLKPSNLFLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTGAIDIWSVGCILAEINTRQPLFPGRDYIHQLKLITELIGSPDDSSLGFLRNDSTRRYVRQLPQHPMQQFSSRFPTMSPGAADLLAKMLVFDPSKRITVEEALCHPYMASLHDINEEPVCPRPFSFDFEQPSYTEINIKELIWRESVRFNP 372
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2978852 2982665 - Bda033017 Bda11g00256 15364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00256 372 SUPERFAMILY Protein kinase-like (PK-like) 46 336 IPR011009 -
Bda11g00256 372 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11-RELATED 18 372 - -
Bda11g00256 372 ProSitePatterns Protein kinases ATP-binding region signature. 49 73 IPR017441 GO:0005524
Bda11g00256 372 Gene3D Transferase(Phosphotransferase) domain 1 127 356 - -
Bda11g00256 372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Bda11g00256 372 CDD STKc_TEY_MAPK 36 372 - -
Bda11g00256 372 ProSitePatterns MAP kinase signature. 78 181 IPR003527 GO:0004707|GO:0005524|GO:0006468
Bda11g00256 372 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 18 372 - -
Bda11g00256 372 Pfam Protein kinase domain 47 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g00256 372 Gene3D Phosphorylase Kinase; domain 1 26 366 - -
Bda11g00256 372 SMART serkin_6 43 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g00256 372 ProSiteProfiles Protein kinase domain profile. 43 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00491 Bda-Chr7:6143985 Bda11g00256 Bda-Chr11:2978852 0 dispersed
Bda07g00616 Bda-Chr7:7528787 Bda11g00256 Bda-Chr11:2978852 0 dispersed
Bda11g00256 Bda-Chr11:2978852 Bda11g01853 Bda-Chr11:53680783 1.33E-144 dispersed
Bda11g00256 Bda-Chr11:2978852 Bda10g00939 Bda-Chr10:43740442 2.91E-179 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69890 PF00069 Pkinase 3.40E-69 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00256 K20600 - csin:114309362 675.626