Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda11g00262 | ATGGATTTTGCATGTACTTTCTCGCAGCCGAAGGTGGTGTGTGGCAGTGTTGGAACGAGTTATAATACACCAGACCGTGTTAATTCATACAATGTGTTTAGAAGTAGAGTCATCGATTTTAAGTTTCTTGGTAGTCCAAAAATTGTTACTAAAGAGAGATTGAGAAAGAAGATGAAACTCACGGCTAATCATGGTTCAACAAATACAAGTGTGGGTTTTAACAGATTGTATGATATCCAGTCAAAAAACAAAATTTCGAGAAGATTGTTATTCAATAATAGTGACATTGCATTGAAGATGTCAAGGGTTGCTGTCTCACAGTGTCAAGGCGATGATTCTTTAGCATTTATTGGTGGAAATGGTAGAAATGCAGATTTCATGGATGGCCGTGATGGTGCCTTAGAATCAGGGTCCACTGATGATGATCAGCCCTTAGTTTTGAGGGAAGTCGATGAAAAAGATGAAGAGAGAGAAAAAGAAGCGCCCAGTGTGGATGAGTTGAGAGAATCTCTTCAAACTGCCATAATGGAACTGGAAGTTGCTAGGATCAATAGCACCATGTTTGAGGAAAGGGCCCAGAAGATATCAGAAACAGCGATAGCCTTGCAAGACGAAGCTGCCAATGCTTGGAATGATATTAATTCTACTCTTGACGTTATTCAACAAATTGTGAATGAAGAATGTATCGCCAAAGAGTCTGTTCAGAAAGCAACAATGTCTCTTTCATTAGCTGAGGCAAGGCTTCAGGTTTCAATTGAATCTTTAGAGATTGCAAAAGGTGGAGATGATTCTTCAGAAAGGTCAGGAGATAGTGATGGGGAATACGATGTTAAGGAGATGGAAAAAGCTGTGTTAATTGCTCAGGAGGACATAAAGGAGTGCCAACAGGATTTGGCAAGTTGTGAGGCAGAATTGAAGCGCATACGGAGTAAAAAAGAGGAACTTCAGAAAGAAGTGGACAGACTTAATGAGGTTGCAGAAAAAATGCAACTGAATGCTTTGAAGGCTGAGGAGGATGTGACTAACATAATGCATTTAGCTGAGCAAGCTGTTGCTCTTGAACTAGAGGCTGCACAAAGGGTCAATGATGCTGAGATTGCTTTACAGAAAGCAGAGAAATCTCTTGCTAATATTTCTATCGACCTTTCTGAAACTATGCAAGGGAAGGAGTTCAGTGATGAGGTTGTTGTTGAGGAGGAGAGACTGCTTCAAGCAATGTCTGTTGATTTCACTGTTGATAATGACCGAAAGGTTTCTACTGATGGTAATTCCTTTGATATCAAGCCTTTATTGGATAGCTTTTCTGATTCTGAAGACCTCAACAAGTTTAATGACTTTAGTGACCATGAGAATGGAAAGTTAAGTTTTGACTCCCCCAAGGAGGGTGACATCGAACTGGATAAGCCAAAGATTATGGGTCAAACAAAAAAACAGGAAATGCAGAAGGAATTGGTCAGGGAAACTTCACCCTCAAATGCTCCCAAGGCACTACTGAACAAATCTTCGCGTTTTTTTTCCGCATCATTCTTTTCTTTTACTGTTGATGGGACTGAGTTCACACCGGCATCAGTTTACCGGAGTCTCATGGAGTTTTCAAGGAAGCATTTGCCCAAAGTAGTTGTTGGATTACTACTATTTGGAGGGGCAACCTTTGTTGCTATTCGTGCTGAGAGGAGTCCTCAGCTATTGCAACAAGAAGATGTTGTCACCTCTAGCATTGAAGAAGTTTCGTCAAAACCTCTTGTTCATCAACTTAGAAATCTTCCAAAGAGAGTTAAAAAATTAATAGCAATGCTTCCGCATCAAGAGGTGAATGAGGAAGAAGCTTCCCTTTTTGACATGCTGTGGCTACTGCTTGCTAGTGTAATATTTGTGCCTCTATTTCAGAGGATTCCTGGAGGCAGCCCTGTTCTTGGTTACTTAGCTGCTGGAATCTTGATCGGGCCTTATGGTCTTTCCATAATTCGTCATGTGCATGGAACAAAAGCAATTGCTGAATTTGGAGTTGTATTTCTACTGTTCAACATTGGCCTTGAGCTATCAGTGGAAAGGTTGAGTTCTATGAAGAAATATGTTTTTGGGTTGGGCTCTGCTCAGGTTTTGGTTACGGCTGTGGTGGTTGGCTTGGTTGCTCATTTCCTTTGTGGGCAGCTTGGTCCTGCTGCAATTGTCATCGGAAATGGTCTAGCTTTATCATCCACTGCTGTTGTTCTGCAGGTGTTGCAGGAACGAGGTGAGAGCACGTCACGGCATGGACGCGCTACATTTTCTGTCCTATTGTTCCAGGATTTGGCCGTTGTTGTATTGCTGATACTCATACCTCTTATTTCACCAAATTCATCAAAAGGAGGGGTCGGTTTTCAAGCCATTGCTGAAGCTCTTGGAATGGCTGCTGTTAAGGCATTAGTTGCCATTTCTGCCATTATAGCTGGTGGGCGCTTGCTACTTCGACCTATTTATAAGCAAATTGCAGAAAATCAAAATGCAGAAATATTCTCTGCAAATACACTCCTTGTTATTTTAGGAACAAGTTTATTAACAGCAAGGGCTGGACTATCCATGGCATTGGGTGCATTTCTAGCTGGTTTACTTCTTGCAGAAACAGAATTTTCTTTGCAAGTTGAATCTGATATTGCTCCATATCGTGGTCTTTTGTTGGGTCTTTTCTTCATGACGGTTGGAATGTCTATTGATCCAAAGCTGCTTATTTCAAATTTTCCAGTTGTTGCTGGGTCATTGGGGCTTCTAATCGGTGGCAAGACCTTATTAGTTGCATTAGTTGGTAGGGTTTTTGGCATCTCAATCATATCTGCAATTAGAGTTGGTCTACTTCTTGCTCCAGGGGGAGAGTTTGCTTTTGTTGCCTTTGGTGAAGCTGTTAATCAGGGTATAATGTCTTCTCAGTTGTCCTCGTTGCTATTTCTTGTGGTTGGGATTTCTATGGCCGTCACCCCATGGCTAGCTGCTGGAGGCCAATTGATTGCTTCTCGATTTGAACTGCATGATGTGCGGAGTTTGTTACCTGATGAAAGAGAGACAGATGATTTGCAAGATCATATTATCATTTGTGGATTTGGACGAGTTGGCCAGATAATTGCACAGCTTCTTTCAGAGCGGCTTATTCCTTTTGTTGCTCTCGATGTGAGGAGTGACAGAGTGGCAGTTGGACGTGCACTCGACCTTCCTGTGTATTTTGGAGATGCTGGTAGTCGAGAGGTTCTTCATAAAATTGGTGCCGAAAGAGCATGCGCGGCTGCAATAACTCTGGATTCACCTGGTGCAAATTATAGAACTGTTTGGGCGCTTAGCAAGTATTTTCCAAATGTAAAGACTTTCGTTCGTGCTCATGATGTTGATCATGGGCTTAATTTAGAAAAGGCTGGTGCAACAGCGGTTGTCCCAGAAACTTTGGAACCAAGTCTGCAGCTCGCGGCTGCCGTTCTTGCCCAGACTAAACTACCCACATCAGAGATTGCAGCTACAATCAACGAATTCAGGTCTCGTCATTTGTCGGAGCTCAGCGAGTTATGTGAAGCCACTGGAAGTTCTCTTGGATATGGGTTTTCAAGAATGATGAGTAAATCAAAACCTCAATCACCAGATTCTTCAGAAGAGAACCAAATTATTGAAGGAACTTTGGCAATATAG | 3648 | 42.05 | MDFACTFSQPKVVCGSVGTSYNTPDRVNSYNVFRSRVIDFKFLGSPKIVTKERLRKKMKLTANHGSTNTSVGFNRLYDIQSKNKISRRLLFNNSDIALKMSRVAVSQCQGDDSLAFIGGNGRNADFMDGRDGALESGSTDDDQPLVLREVDEKDEEREKEAPSVDELRESLQTAIMELEVARINSTMFEERAQKISETAIALQDEAANAWNDINSTLDVIQQIVNEECIAKESVQKATMSLSLAEARLQVSIESLEIAKGGDDSSERSGDSDGEYDVKEMEKAVLIAQEDIKECQQDLASCEAELKRIRSKKEELQKEVDRLNEVAEKMQLNALKAEEDVTNIMHLAEQAVALELEAAQRVNDAEIALQKAEKSLANISIDLSETMQGKEFSDEVVVEEERLLQAMSVDFTVDNDRKVSTDGNSFDIKPLLDSFSDSEDLNKFNDFSDHENGKLSFDSPKEGDIELDKPKIMGQTKKQEMQKELVRETSPSNAPKALLNKSSRFFSASFFSFTVDGTEFTPASVYRSLMEFSRKHLPKVVVGLLLFGGATFVAIRAERSPQLLQQEDVVTSSIEEVSSKPLVHQLRNLPKRVKKLIAMLPHQEVNEEEASLFDMLWLLLASVIFVPLFQRIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLVTAVVVGLVAHFLCGQLGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGMAAVKALVAISAIIAGGRLLLRPIYKQIAENQNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLISNFPVVAGSLGLLIGGKTLLVALVGRVFGISIISAIRVGLLLAPGGEFAFVAFGEAVNQGIMSSQLSSLLFLVVGISMAVTPWLAAGGQLIASRFELHDVRSLLPDERETDDLQDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSDRVAVGRALDLPVYFGDAGSREVLHKIGAERACAAAITLDSPGANYRTVWALSKYFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQTKLPTSEIAATINEFRSRHLSELSELCEATGSSLGYGFSRMMSKSKPQSPDSSEENQIIEGTLAI | 1215 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 3058379 | 3070557 | + | Bda004982.1 | Bda11g00262 | 15370 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda11g00262 | 1215 | PANTHER | K(+) EFFLUX ANTIPORTER 1, CHLOROPLASTIC-RELATED | 1 | 1215 | - | - | |
Bda11g00262 | 1215 | ProSiteProfiles | RCK N-terminal domain profile. | 1019 | 1141 | IPR003148 | GO:0006813 | |
Bda11g00262 | 1215 | Coils | Coil | 164 | 184 | - | - | |
Bda11g00262 | 1215 | Coils | Coil | 361 | 381 | - | - | |
Bda11g00262 | 1215 | TIGRFAM | 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family | 618 | 898 | IPR004771 | GO:0006812|GO:0008324|GO:0016021 | |
Bda11g00262 | 1215 | Pfam | TrkA-N domain | 1020 | 1133 | IPR003148 | GO:0006813 | |
Bda11g00262 | 1215 | Gene3D | - | 1015 | 1179 | - | - | |
Bda11g00262 | 1215 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 1016 | 1157 | IPR036291 | - | |
Bda11g00262 | 1215 | Coils | Coil | 277 | 339 | - | - | |
Bda11g00262 | 1215 | Pfam | Sodium/hydrogen exchanger family | 616 | 987 | IPR006153 | GO:0006812|GO:0015299|GO:0016021|GO:0055085 | |
Bda11g00262 | 1215 | PANTHER | K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC | 1 | 1215 | - | - | |
Bda11g00262 | 1215 | Gene3D | - | 607 | 993 | IPR038770 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda06g00656 | Bda-Chr6:9124956 | Bda11g00262 | Bda-Chr11:3058379 | 6.75E-39 | dispersed | |
Bda11g00262 | Bda-Chr11:3058379 | Bda15g00485 | Bda-Chr15:8010253 | 5.87E-86 | dispersed | |
Bda11g00262 | Bda-Chr11:3058379 | Bda13g01606 | Bda-Chr13:39592533 | 2.71E-36 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda11g00262 | - | - | jre:109012107 | 1677.92 |