Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00262 ATGGATTTTGCATGTACTTTCTCGCAGCCGAAGGTGGTGTGTGGCAGTGTTGGAACGAGTTATAATACACCAGACCGTGTTAATTCATACAATGTGTTTAGAAGTAGAGTCATCGATTTTAAGTTTCTTGGTAGTCCAAAAATTGTTACTAAAGAGAGATTGAGAAAGAAGATGAAACTCACGGCTAATCATGGTTCAACAAATACAAGTGTGGGTTTTAACAGATTGTATGATATCCAGTCAAAAAACAAAATTTCGAGAAGATTGTTATTCAATAATAGTGACATTGCATTGAAGATGTCAAGGGTTGCTGTCTCACAGTGTCAAGGCGATGATTCTTTAGCATTTATTGGTGGAAATGGTAGAAATGCAGATTTCATGGATGGCCGTGATGGTGCCTTAGAATCAGGGTCCACTGATGATGATCAGCCCTTAGTTTTGAGGGAAGTCGATGAAAAAGATGAAGAGAGAGAAAAAGAAGCGCCCAGTGTGGATGAGTTGAGAGAATCTCTTCAAACTGCCATAATGGAACTGGAAGTTGCTAGGATCAATAGCACCATGTTTGAGGAAAGGGCCCAGAAGATATCAGAAACAGCGATAGCCTTGCAAGACGAAGCTGCCAATGCTTGGAATGATATTAATTCTACTCTTGACGTTATTCAACAAATTGTGAATGAAGAATGTATCGCCAAAGAGTCTGTTCAGAAAGCAACAATGTCTCTTTCATTAGCTGAGGCAAGGCTTCAGGTTTCAATTGAATCTTTAGAGATTGCAAAAGGTGGAGATGATTCTTCAGAAAGGTCAGGAGATAGTGATGGGGAATACGATGTTAAGGAGATGGAAAAAGCTGTGTTAATTGCTCAGGAGGACATAAAGGAGTGCCAACAGGATTTGGCAAGTTGTGAGGCAGAATTGAAGCGCATACGGAGTAAAAAAGAGGAACTTCAGAAAGAAGTGGACAGACTTAATGAGGTTGCAGAAAAAATGCAACTGAATGCTTTGAAGGCTGAGGAGGATGTGACTAACATAATGCATTTAGCTGAGCAAGCTGTTGCTCTTGAACTAGAGGCTGCACAAAGGGTCAATGATGCTGAGATTGCTTTACAGAAAGCAGAGAAATCTCTTGCTAATATTTCTATCGACCTTTCTGAAACTATGCAAGGGAAGGAGTTCAGTGATGAGGTTGTTGTTGAGGAGGAGAGACTGCTTCAAGCAATGTCTGTTGATTTCACTGTTGATAATGACCGAAAGGTTTCTACTGATGGTAATTCCTTTGATATCAAGCCTTTATTGGATAGCTTTTCTGATTCTGAAGACCTCAACAAGTTTAATGACTTTAGTGACCATGAGAATGGAAAGTTAAGTTTTGACTCCCCCAAGGAGGGTGACATCGAACTGGATAAGCCAAAGATTATGGGTCAAACAAAAAAACAGGAAATGCAGAAGGAATTGGTCAGGGAAACTTCACCCTCAAATGCTCCCAAGGCACTACTGAACAAATCTTCGCGTTTTTTTTCCGCATCATTCTTTTCTTTTACTGTTGATGGGACTGAGTTCACACCGGCATCAGTTTACCGGAGTCTCATGGAGTTTTCAAGGAAGCATTTGCCCAAAGTAGTTGTTGGATTACTACTATTTGGAGGGGCAACCTTTGTTGCTATTCGTGCTGAGAGGAGTCCTCAGCTATTGCAACAAGAAGATGTTGTCACCTCTAGCATTGAAGAAGTTTCGTCAAAACCTCTTGTTCATCAACTTAGAAATCTTCCAAAGAGAGTTAAAAAATTAATAGCAATGCTTCCGCATCAAGAGGTGAATGAGGAAGAAGCTTCCCTTTTTGACATGCTGTGGCTACTGCTTGCTAGTGTAATATTTGTGCCTCTATTTCAGAGGATTCCTGGAGGCAGCCCTGTTCTTGGTTACTTAGCTGCTGGAATCTTGATCGGGCCTTATGGTCTTTCCATAATTCGTCATGTGCATGGAACAAAAGCAATTGCTGAATTTGGAGTTGTATTTCTACTGTTCAACATTGGCCTTGAGCTATCAGTGGAAAGGTTGAGTTCTATGAAGAAATATGTTTTTGGGTTGGGCTCTGCTCAGGTTTTGGTTACGGCTGTGGTGGTTGGCTTGGTTGCTCATTTCCTTTGTGGGCAGCTTGGTCCTGCTGCAATTGTCATCGGAAATGGTCTAGCTTTATCATCCACTGCTGTTGTTCTGCAGGTGTTGCAGGAACGAGGTGAGAGCACGTCACGGCATGGACGCGCTACATTTTCTGTCCTATTGTTCCAGGATTTGGCCGTTGTTGTATTGCTGATACTCATACCTCTTATTTCACCAAATTCATCAAAAGGAGGGGTCGGTTTTCAAGCCATTGCTGAAGCTCTTGGAATGGCTGCTGTTAAGGCATTAGTTGCCATTTCTGCCATTATAGCTGGTGGGCGCTTGCTACTTCGACCTATTTATAAGCAAATTGCAGAAAATCAAAATGCAGAAATATTCTCTGCAAATACACTCCTTGTTATTTTAGGAACAAGTTTATTAACAGCAAGGGCTGGACTATCCATGGCATTGGGTGCATTTCTAGCTGGTTTACTTCTTGCAGAAACAGAATTTTCTTTGCAAGTTGAATCTGATATTGCTCCATATCGTGGTCTTTTGTTGGGTCTTTTCTTCATGACGGTTGGAATGTCTATTGATCCAAAGCTGCTTATTTCAAATTTTCCAGTTGTTGCTGGGTCATTGGGGCTTCTAATCGGTGGCAAGACCTTATTAGTTGCATTAGTTGGTAGGGTTTTTGGCATCTCAATCATATCTGCAATTAGAGTTGGTCTACTTCTTGCTCCAGGGGGAGAGTTTGCTTTTGTTGCCTTTGGTGAAGCTGTTAATCAGGGTATAATGTCTTCTCAGTTGTCCTCGTTGCTATTTCTTGTGGTTGGGATTTCTATGGCCGTCACCCCATGGCTAGCTGCTGGAGGCCAATTGATTGCTTCTCGATTTGAACTGCATGATGTGCGGAGTTTGTTACCTGATGAAAGAGAGACAGATGATTTGCAAGATCATATTATCATTTGTGGATTTGGACGAGTTGGCCAGATAATTGCACAGCTTCTTTCAGAGCGGCTTATTCCTTTTGTTGCTCTCGATGTGAGGAGTGACAGAGTGGCAGTTGGACGTGCACTCGACCTTCCTGTGTATTTTGGAGATGCTGGTAGTCGAGAGGTTCTTCATAAAATTGGTGCCGAAAGAGCATGCGCGGCTGCAATAACTCTGGATTCACCTGGTGCAAATTATAGAACTGTTTGGGCGCTTAGCAAGTATTTTCCAAATGTAAAGACTTTCGTTCGTGCTCATGATGTTGATCATGGGCTTAATTTAGAAAAGGCTGGTGCAACAGCGGTTGTCCCAGAAACTTTGGAACCAAGTCTGCAGCTCGCGGCTGCCGTTCTTGCCCAGACTAAACTACCCACATCAGAGATTGCAGCTACAATCAACGAATTCAGGTCTCGTCATTTGTCGGAGCTCAGCGAGTTATGTGAAGCCACTGGAAGTTCTCTTGGATATGGGTTTTCAAGAATGATGAGTAAATCAAAACCTCAATCACCAGATTCTTCAGAAGAGAACCAAATTATTGAAGGAACTTTGGCAATATAG 3648 42.05 MDFACTFSQPKVVCGSVGTSYNTPDRVNSYNVFRSRVIDFKFLGSPKIVTKERLRKKMKLTANHGSTNTSVGFNRLYDIQSKNKISRRLLFNNSDIALKMSRVAVSQCQGDDSLAFIGGNGRNADFMDGRDGALESGSTDDDQPLVLREVDEKDEEREKEAPSVDELRESLQTAIMELEVARINSTMFEERAQKISETAIALQDEAANAWNDINSTLDVIQQIVNEECIAKESVQKATMSLSLAEARLQVSIESLEIAKGGDDSSERSGDSDGEYDVKEMEKAVLIAQEDIKECQQDLASCEAELKRIRSKKEELQKEVDRLNEVAEKMQLNALKAEEDVTNIMHLAEQAVALELEAAQRVNDAEIALQKAEKSLANISIDLSETMQGKEFSDEVVVEEERLLQAMSVDFTVDNDRKVSTDGNSFDIKPLLDSFSDSEDLNKFNDFSDHENGKLSFDSPKEGDIELDKPKIMGQTKKQEMQKELVRETSPSNAPKALLNKSSRFFSASFFSFTVDGTEFTPASVYRSLMEFSRKHLPKVVVGLLLFGGATFVAIRAERSPQLLQQEDVVTSSIEEVSSKPLVHQLRNLPKRVKKLIAMLPHQEVNEEEASLFDMLWLLLASVIFVPLFQRIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLVTAVVVGLVAHFLCGQLGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGMAAVKALVAISAIIAGGRLLLRPIYKQIAENQNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLISNFPVVAGSLGLLIGGKTLLVALVGRVFGISIISAIRVGLLLAPGGEFAFVAFGEAVNQGIMSSQLSSLLFLVVGISMAVTPWLAAGGQLIASRFELHDVRSLLPDERETDDLQDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSDRVAVGRALDLPVYFGDAGSREVLHKIGAERACAAAITLDSPGANYRTVWALSKYFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQTKLPTSEIAATINEFRSRHLSELSELCEATGSSLGYGFSRMMSKSKPQSPDSSEENQIIEGTLAI 1215
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3058379 3070557 + Bda004982.1 Bda11g00262 15370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00262 1215 PANTHER K(+) EFFLUX ANTIPORTER 1, CHLOROPLASTIC-RELATED 1 1215 - -
Bda11g00262 1215 ProSiteProfiles RCK N-terminal domain profile. 1019 1141 IPR003148 GO:0006813
Bda11g00262 1215 Coils Coil 164 184 - -
Bda11g00262 1215 Coils Coil 361 381 - -
Bda11g00262 1215 TIGRFAM 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 618 898 IPR004771 GO:0006812|GO:0008324|GO:0016021
Bda11g00262 1215 Pfam TrkA-N domain 1020 1133 IPR003148 GO:0006813
Bda11g00262 1215 Gene3D - 1015 1179 - -
Bda11g00262 1215 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1016 1157 IPR036291 -
Bda11g00262 1215 Coils Coil 277 339 - -
Bda11g00262 1215 Pfam Sodium/hydrogen exchanger family 616 987 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Bda11g00262 1215 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 1 1215 - -
Bda11g00262 1215 Gene3D - 607 993 IPR038770 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00656 Bda-Chr6:9124956 Bda11g00262 Bda-Chr11:3058379 6.75E-39 dispersed
Bda11g00262 Bda-Chr11:3058379 Bda15g00485 Bda-Chr15:8010253 5.87E-86 dispersed
Bda11g00262 Bda-Chr11:3058379 Bda13g01606 Bda-Chr13:39592533 2.71E-36 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00262 - - jre:109012107 1677.92