Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00278 ATGGATTCCAGTTCTCAGGGAACCTCTGCAGATTCATCAACTCCGTCGAAGATCGTCCTCTACTCTTTCTGGCAGAGCTCTTGCTGTTGGCGAGTCCGTTTCGCTCTCAATCTCAAAGGGCTTTCGTACGAGTACAGATCGGTAAACCTAGCAAAGGGTGAACAGTTTAGTCCAGAATTCGAGCGTTTAAACCCTCTTAAGTATGTCCCAGTATTAGTGGATGGGGATGTGGTTCTGTCGGACTCCTTTGCAATACTTCTGTATTTGGAAGAGAAGTATCATCAAAAACCATTATTGCCTGCTGATCCTCAGCTTAGAGCTCTTAATCTTCAGGCTGCCAGTGTGGTTACCTCTAGCATACAACCTCTAATTATGTTGGACTTGCTGAAATCTATTGAGGAAAAAGTTGGTTCTGAAAAACAACAATTGTGGGCTCAGTCCACCATAGAAAAAGGTTTTTCTGGCTGA 468 44.02 MDSSSQGTSADSSTPSKIVLYSFWQSSCCWRVRFALNLKGLSYEYRSVNLAKGEQFSPEFERLNPLKYVPVLVDGDVVLSDSFAILLYLEEKYHQKPLLPADPQLRALNLQAASVVTSSIQPLIMLDLLKSIEEKVGSEKQQLWAQSTIEKGFSG 155
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3219951 3222869 - Bda005004.1 Bda11g00278 15386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00278 155 ProSiteProfiles Glutaredoxin domain profile. 6 106 - -
Bda11g00278 155 Gene3D Glutaredoxin 20 96 - -
Bda11g00278 155 CDD GST_N_Zeta 18 90 IPR034333 -
Bda11g00278 155 Gene3D - 99 155 - -
Bda11g00278 155 SUPERFAMILY Thioredoxin-like 14 101 IPR036249 -
Bda11g00278 155 PANTHER GLUTATHIONE S-TRANSFERASE 2-LIKE ISOFORM X1 8 154 - -
Bda11g00278 155 PANTHER MALEYLACETOACETATE ISOMERASE 8 154 - -
Bda11g00278 155 Pfam Glutathione S-transferase, N-terminal domain 20 97 IPR004045 -
Bda11g00278 155 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 16 97 IPR004045 -
Bda11g00278 155 SFLD Glutathione Transferase (cytosolic) 19 132 IPR040079 -
Bda11g00278 155 SFLD Main (cytGST) 19 132 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g00278 Bda-Chr11:3219951 Bda08g00016 Bda-Chr8:151173 1.45E-11 dispersed
Bda13g00725 Bda-Chr13:8729808 Bda11g00278 Bda-Chr11:3219951 1.11E-07 dispersed
Bda04g01003 Bda-Chr4:60964097 Bda11g00278 Bda-Chr11:3219951 1.09E-07 transposed
Bda13g01058 Bda-Chr13:12359873 Bda11g00278 Bda-Chr11:3219951 3.28E-29 transposed
Bda11g00278 Bda-Chr11:3219951 Bda08g00522 Bda-Chr8:5246720 2.11E-09 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00278 K01800 - pvy:116128110 221.476