Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00288 ATGAGTTTTGGGGGTTTTCTTGATCATCCTCACGGTTCTAGTGGCGGTGGACCAAGAATCGTCGCCGATTTACCTTTCGCCGCCAGCAACGCCGAAACCGCCATTAATATGGCTTCAGCTACAATAGCTCAGCCTCGTCTTCTTTCTCAAGCTCTCGCCAAATCCATTTTCAACTCTCCTGGCCTCTCTTTGGCTCTTATTGATATTGATGTGCAAGGAGACCTGGCTGCTAGAATGGCTGAGAATTTAGAGCCTAATCTTGGTAGAAGAAGCAGAGATGAAGAACACGAGAGCAAATCTGCCAGCGATAACGTCGACGGTGGCTCAGGCGACGATCTAGACGGTGCTGATAATCGGCTGAGGAAGAAGAGATATCACCGACACACTCCTCAGCAAATCCAAGAACTAGAAGCTTTGTTTAAGGAGTGTCCCCATCCTGATGAGAAACAAAGATTGGATCTTAGCAAAAGGCTTTGTTTGGAAATCCGACAAGTTAAATTCTGGTTTCAAAATCGTCGAACGCAGATGAAGACTCAATTGGAACGCCATGAAAATACATTATTGAGGCAGGACAACGATAAACTAAGAGCGGAAAACATGTCGATACGCAACGCCATGAGAAACCCTTTGTGCTCAAACTGTGGTGGCCCTGCAATTATCGGTGAAATCTCGCTCGAAGAGCAGCATTTGAAGATTGAAAATGCGCGATTGAAGGACGAGTTAGACCGTGTTTGTTCGCTTGCGGGAAAGTTTTTGGGTCGACCCATTTCATCGCTGTCGGCTTCAATTGCACCTCCATTGCCAAGCTCAAGCTTAGAGCTTGGAGTTGGGAATGAAATTGGGCAAGGCGGTTTGAGCAGTGTGTCGACGACCGTAGTTATAGGACCGGATTTTGGCAGTGGAATTTCGAGTCATTTGCCAATCGTGCCTTCAACGAGAACATCGAGTTGTTTGACAGGGCTCGATGGGTCAACCAATAGATCCATGTTTCTCGAGCTTGCTTTGGCTGCAATGGATGAACTAGTTAGGATGGCACAGACCGATGAGCCTCTCTGGATTAGAAGCTCGGAAGGTGGACGAGAAACGACATTAAACCACGAAGAGTACATTATAGCTTTCAATCCTTGCATTGGATTAAAGCCAAACGGGTTTGTTACCGAAGCATCTAAGGAAACTGGAATGGTCACAATCGACGGCTTGGCTCTTGTTGAGACATTGATGGATTCGGCTCGATGGGCCGAGATGTTTCCATGTATGATCGCTAGAACAACTACGACTGACTTCATTTCGAGTGGTATGGGTGGAACAAGAAATGGTGCACTTCAATTGATGCAGGCCGAGCTTCAAGTTCTTTCGCCTTTGGTTCCAGTTCGTGCGGTAAACTTCCTCCGGTTTTGCAAGCAACATGCAGAAGGTGTATGGGCTGTGGTCGACGTCTCCATTGATAGCCTCAGAGACGCTCCTCCATTATTCAACTGCAGGCGGCTTCCTTCCGGCTGCATAGTTGAAGATATGCCATATGGGTATTCCAAGGTTACGTGGGTGGAGCATGCAGATTACGATGAGAGCCTTGTTCATCAACTGTACCGGCCTCTTTTAAGCTCCGGCATGGCCTTCGGCGCCAAGCGGTGGTTGGCCACTCTCCAGCGGCAATGCGAGTGTCTCCACATTCTCACTTCCTCCGCCAACCCCTCTCGCGATCATGCAGCGATTACTGCTGGTGGCCGGAGAAGCATGCTGAAACTGGCGCAGAGGATGACGGACAACTTTTGCGCCGGAGTTTGCGCTTCTACGGTGCACAAGTGGAACAAACTCAATGCCGGGAATGTGGACGAGGATGTGCAGGTGATGACCAGGAAGAGCGTGGATGATCCGGGAGAGCCGCCGGGTGTGGTGCTCAGCGCCGCCACCTCCGTCTGGCTCCCCGTTTCTCCTCAAACACTGTTTGACTTTTTGCGCGATGAACGGCTGAGGAGAGAGTGGGATATTTTATCCAACGGTGGTCCCATGCAGGAGATGGCCCACATCGCTAAAGGCCAAGGTCACGGCAACTGCGTCTCTCTCCTCCGAGCCAGCGCTATGAAAGCCAGCCAGAGCAGCATGCTGATCCTACAGGAGACTTGCGTAGATGGCGCCGGAGCCCTTGTCGTGTACGCGCCAGTGGACATTCCAGCCATGCACTTGGTGATGAATGGCGGCGATTCATCCTACGTGGCATTACTCCCATCCGGATTTGCGATAGTCCCGGATGGGCCAGATTCTCGCGGTGGATCTTCCACCGGCGGTACCCCGAACGGCCGTGAGGGCCCACGGAGAGTCAGTGGGTCCCTCCTGACGGTGGCTTTCCAGATTCTTGTGAATAGCTTGCCTACTGACAAGCTTACCGTGGAATCGGTGGAGACGGTCAACAATTTAATCACGTGCACGGTGCAGAAGATCAAGGCCGCTCTTCAATGCGGAAGCTGA 2466 51.09 MSFGGFLDHPHGSSGGGPRIVADLPFAASNAETAINMASATIAQPRLLSQALAKSIFNSPGLSLALIDIDVQGDLAARMAENLEPNLGRRSRDEEHESKSASDNVDGGSGDDLDGADNRLRKKRYHRHTPQQIQELEALFKECPHPDEKQRLDLSKRLCLEIRQVKFWFQNRRTQMKTQLERHENTLLRQDNDKLRAENMSIRNAMRNPLCSNCGGPAIIGEISLEEQHLKIENARLKDELDRVCSLAGKFLGRPISSLSASIAPPLPSSSLELGVGNEIGQGGLSSVSTTVVIGPDFGSGISSHLPIVPSTRTSSCLTGLDGSTNRSMFLELALAAMDELVRMAQTDEPLWIRSSEGGRETTLNHEEYIIAFNPCIGLKPNGFVTEASKETGMVTIDGLALVETLMDSARWAEMFPCMIARTTTTDFISSGMGGTRNGALQLMQAELQVLSPLVPVRAVNFLRFCKQHAEGVWAVVDVSIDSLRDAPPLFNCRRLPSGCIVEDMPYGYSKVTWVEHADYDESLVHQLYRPLLSSGMAFGAKRWLATLQRQCECLHILTSSANPSRDHAAITAGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVQVMTRKSVDDPGEPPGVVLSAATSVWLPVSPQTLFDFLRDERLRREWDILSNGGPMQEMAHIAKGQGHGNCVSLLRASAMKASQSSMLILQETCVDGAGALVVYAPVDIPAMHLVMNGGDSSYVALLPSGFAIVPDGPDSRGGSSTGGTPNGREGPRRVSGSLLTVAFQILVNSLPTDKLTVESVETVNNLITCTVQKIKAALQCGS 821
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3291076 3295326 - Bda005014.1 Bda11g00288 15396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00288 821 CDD START_ArGLABRA2_like 327 553 - -
Bda11g00288 821 Pfam Homeodomain 122 177 IPR001356 GO:0003677
Bda11g00288 821 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 63 818 IPR042160 -
Bda11g00288 821 SUPERFAMILY Bet v1-like 575 806 - -
Bda11g00288 821 SUPERFAMILY Homeodomain-like 106 179 IPR009057 -
Bda11g00288 821 ProSiteProfiles 'Homeobox' domain profile. 119 179 IPR001356 GO:0003677
Bda11g00288 821 SUPERFAMILY Bet v1-like 327 554 - -
Bda11g00288 821 MobiDBLite consensus disorder prediction 86 102 - -
Bda11g00288 821 Gene3D - 111 195 - -
Bda11g00288 821 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG1 63 818 - -
Bda11g00288 821 SMART START_1 332 554 IPR002913 GO:0008289
Bda11g00288 821 MobiDBLite consensus disorder prediction 750 771 - -
Bda11g00288 821 CDD homeodomain 121 179 IPR001356 GO:0003677
Bda11g00288 821 Pfam START domain 332 554 IPR002913 GO:0008289
Bda11g00288 821 ProSiteProfiles START domain profile. 323 557 IPR002913 GO:0008289
Bda11g00288 821 MobiDBLite consensus disorder prediction 86 117 - -
Bda11g00288 821 ProSitePatterns 'Homeobox' domain signature. 154 177 IPR017970 GO:0000981|GO:0006355
Bda11g00288 821 Coils Coil 180 200 - -
Bda11g00288 821 SMART HOX_1 120 183 IPR001356 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda08g00354 Bda11g00288 CCT
Bda08g00354 Bda11g00288 ECH
Bda11g00288 Bda13g00333 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g00288 Bda-Chr11:3291076 Bda13g00333 Bda-Chr13:4230213 0 dispersed
Bda11g00288 Bda-Chr11:3291076 Bda14g00713 Bda-Chr14:5378449 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16573 PF01852 START 1.90E-52 CL0209 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00288 K09338 - qsu:111991611 1259.97