Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00297 ATGGCTGGTTTAGATTTAAGCTCAGCTTCTCGCTTTATTTATCAACTCCAGCAGCGCCCGGACCTTCATCTCCGACGACCTGCCACAGACGACGATGTCTCCAATCCCAACCACTTCGCTGGAGCGGACGACGAGGAAGAAAATACCCACCATGGCGTTGACCTAATTACCTCCAACGCTGAACCCGGGGACATAGTAACTCGCCGGCCTAGAGGCCGACCTCCGGGGTCCAAAAACAAGCCGAAACCTCCGGTGATCATAACCAGAGAGAGCGCAAACACTTTGCGAGCTCATATCCTAGAGGTCAGGTCCGGCTCTGACATGTTTGAATCGGTGGCGACTTATGCTCGGAAGCGTCAGAGAGGGATCTGTGTATTGAGCGGAAGTGGAACAGTGACTAACGTCAGCTTACGTCAACCCTCGTCGCCCGGAGCTGTCGTCACGCTACAAGGCCAGTTCGAGATACTGTCTTTAACCGGTTCGTTTTTGCCTCCACCGGCTCCTCCGGGCGCCACCAGTTTGACGATATTCTTGGCCGGCGGACAAGGTCAGGTAGTAGGAGGTAATGTGGTCGGTGCTCTGATTGCCGCAGGTCCGGTCATCGTTATCGCTTCGTCGTTCACAAACGTGGCTTACGAGAGATTACCATTGGACGAAGAGGAGCCCATCCAGCAGCCTTCAGCCGAAGACTCCGGAGCTGGTTCTGGCGGAAATAACCCTTTTCCGAACCCTTCTTCTGGTTTTCCGTTCTTTAATCTTCCGAACCAGAATCAGCTTCCGTCGGTTGACGGGTGGGGCGGAAATTCAGCAAGACCCACTTACTGA 825 54.18 MAGLDLSSASRFIYQLQQRPDLHLRRPATDDDVSNPNHFAGADDEEENTHHGVDLITSNAEPGDIVTRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVRSGSDMFESVATYARKRQRGICVLSGSGTVTNVSLRQPSSPGAVVTLQGQFEILSLTGSFLPPPAPPGATSLTIFLAGGQGQVVGGNVVGALIAAGPVIVIASSFTNVAYERLPLDEEEPIQQPSAEDSGAGSGGNNPFPNPSSGFPFFNLPNQNQLPSVDGWGGNSARPTY 274
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3364528 3365352 + Bda005023.1 Bda11g00297 15405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00297 274 MobiDBLite consensus disorder prediction 221 274 - -
Bda11g00297 274 MobiDBLite consensus disorder prediction 23 52 - -
Bda11g00297 274 Pfam Plants and Prokaryotes Conserved (PCC) domain 96 209 IPR005175 -
Bda11g00297 274 MobiDBLite consensus disorder prediction 228 264 - -
Bda11g00297 274 MobiDBLite consensus disorder prediction 23 86 - -
Bda11g00297 274 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 271 IPR014476 GO:0003680
Bda11g00297 274 ProSiteProfiles PPC domain profile profile. 92 229 IPR005175 -
Bda11g00297 274 SUPERFAMILY AF0104/ALDC/Ptd012-like 92 221 - -
Bda11g00297 274 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 271 - -
Bda11g00297 274 CDD DUF296 96 179 IPR005175 -
Bda11g00297 274 Gene3D - 95 225 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00104 Bda-Chr7:1276687 Bda11g00297 Bda-Chr11:3364528 4.17E-113 dispersed
Bda09g00709 Bda-Chr9:11462237 Bda11g00297 Bda-Chr11:3364528 2.12E-109 dispersed
Bda11g00297 Bda-Chr11:3364528 Bda15g00342 Bda-Chr15:6271137 3.43E-76 dispersed
Bda11g00297 Bda-Chr11:3364528 Bda13g00442 Bda-Chr13:5389803 7.10E-43 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00297 - - nnu:104610369 354.755