Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00312 TCAATCATGCTCCGCCGTGCCACCGCCGTCATTTTTCGAAGCGTTACGAATGCTAGGGCTCGACCTTTCTCCACCGATCTACCTGCCTCGCCCACACTGGACTCTGCTTTTTCGGAGTCTTGGAAGAAGGTGATCCCCAATATTGATCCTCCGAAAACCCCTCTCTCTTTCATGAAGCCTAGACCTCCGACACCTTCTTCTATTCCTTCTAAGCTCACTGTCAACTTTGTGCTCCCTTATGCTTCCGAGCTCTCTGCCAAGGAGGTTGACATGGTTATCATACCAGCAACAACTGGACAAATGGGTGTTCTTCCAGGCCATGTATCAACAATTGCAGAGTTAAGACCTGGTGTTCTATCAGTACACGAAGGGAATGAAGTGAAGAAGTATTTCATCAGCAGTGGCTTTGCATTCATCCATGCAAACTCTTTTGCTGATATAATTGCTGTCGAGGCCGTGTCACTTGACCAGATCGACTCGAGCCTCGTGCAAAAGGGTCTTGCAGAATTCAACCAGAAGTTGAACTCAGCCGCTACAGATTTGGAGAAAGCTGAAGCTCAAATAGGAGTGGAGGTGCACAGCTCTCTGAACTTTGCTCTGGCAGGCTAG 609 48.6 SIMLRRATAVIFRSVTNARARPFSTDLPASPTLDSAFSESWKKVIPNIDPPKTPLSFMKPRPPTPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVSTIAELRPGVLSVHEGNEVKKYFISSGFAFIHANSFADIIAVEAVSLDQIDSSLVQKGLAEFNQKLNSAATDLEKAEAQIGVEVHSSLNFALAG 202
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3488647 3491079 + Bda005038.1 Bda11g00312 15420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00312 202 Gene3D - 62 158 IPR036771 -
Bda11g00312 202 Hamap ATP synthase epsilon chain [atpC]. 70 190 IPR001469 GO:0015986|GO:0045261|GO:0046933
Bda11g00312 202 PANTHER ATP SYNTHASE SUBUNIT DELTA', MITOCHONDRIAL 3 202 - -
Bda11g00312 202 Gene3D - 159 200 - -
Bda11g00312 202 CDD F1-ATPase_delta 72 193 IPR001469 GO:0015986|GO:0045261|GO:0046933
Bda11g00312 202 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 3 202 IPR001469 GO:0015986|GO:0045261|GO:0046933
Bda11g00312 202 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 72 143 IPR020546 GO:0015986
Bda11g00312 202 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 72 153 IPR036771 -
Bda11g00312 202 Coils Coil 167 187 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda11g00312 Bda13g00464 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g00312 Bda-Chr11:3488647 Bda13g00464 Bda-Chr13:5594766 9.09E-129 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00312 K02134 - tcc:18614544 332.413