Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda11g00335 | ATGGAGAGCTACCCATTGATGTTTGGAAGTTCATCATCTTCAACACAGCTCTATTCTGCATCTTCTCTGTCACTTCCCAGCCACATAGATTCGGAGACTTACAGTGGATGCGGCAGAGGAAATAAAGGAAATGGGTTGTTAAGATCGATACCGGATGATCCGACGGAAATGGAGTTTTCCGGTGGTATTCGCAACAAATTTGCGCCGGAGAATGATGATCCGGTGAAGAGAAAGGGTGAGAAGAAAACAAGAAGTCCGAGATATGCTTTCCAAACCAGAAGCCAAGTTGATATACTTGATGATGGATATAGATGGCGAAAATATGGACAGAAAGCTGTCAAGAACAACAAATTTCCCAGAAGCTACTACAGATGCACTCAACAAGGTTGCAAGGTGAAAAAACAAGTTCAAAGATTAACCAAAGACGAGGGAGTTATCGTGACCACTTACGAAGGCGTACATTCACATCCGATCGAGAAATCAACTGAAAATTTCGAGTACATTTTAAACCAAATGCAAATCTATACTTCTTAG | 534 | 41.57 | MESYPLMFGSSSSSTQLYSASSLSLPSHIDSETYSGCGRGNKGNGLLRSIPDDPTEMEFSGGIRNKFAPENDDPVKRKGEKKTRSPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTQQGCKVKKQVQRLTKDEGVIVTTYEGVHSHPIEKSTENFEYILNQMQIYTS | 177 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 3759636 | 3760904 | + | Bda005068.1 | Bda11g00335 | 15443 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda11g00335 | 177 | MobiDBLite | consensus disorder prediction | 31 | 86 | - | - | |
Bda11g00335 | 177 | Pfam | WRKY DNA -binding domain | 100 | 157 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda11g00335 | 177 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 3 | 174 | IPR044810 | GO:0003700 | |
Bda11g00335 | 177 | SMART | WRKY_cls | 99 | 158 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda11g00335 | 177 | Gene3D | WRKY domain | 83 | 158 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bda11g00335 | 177 | ProSiteProfiles | WRKY domain profile. | 94 | 159 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda11g00335 | 177 | PANTHER | WRKY TRANSCRIPTION FACTOR 75-RELATED | 3 | 174 | - | - | |
Bda11g00335 | 177 | MobiDBLite | consensus disorder prediction | 69 | 86 | - | - | |
Bda11g00335 | 177 | SUPERFAMILY | WRKY DNA-binding domain | 91 | 158 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda08g00075 | Bda11g00335 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda07g01384 | Bda-Chr7:16682238 | Bda11g00335 | Bda-Chr11:3759636 | 5.75E-63 | dispersed | |
Bda11g00335 | Bda-Chr11:3759636 | Bda02g00076 | Bda-Chr2:2990854 | 1.41E-35 | dispersed | |
Bda11g00335 | Bda-Chr11:3759636 | Bda05g00405 | Bda-Chr5:49364112 | 1.02E-34 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16576 | PF03106 | WRKY | 9.60E-26 | CL0274 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda11g00335 | - | - | pvy:116131235 | 206.068 |