Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00335 ATGGAGAGCTACCCATTGATGTTTGGAAGTTCATCATCTTCAACACAGCTCTATTCTGCATCTTCTCTGTCACTTCCCAGCCACATAGATTCGGAGACTTACAGTGGATGCGGCAGAGGAAATAAAGGAAATGGGTTGTTAAGATCGATACCGGATGATCCGACGGAAATGGAGTTTTCCGGTGGTATTCGCAACAAATTTGCGCCGGAGAATGATGATCCGGTGAAGAGAAAGGGTGAGAAGAAAACAAGAAGTCCGAGATATGCTTTCCAAACCAGAAGCCAAGTTGATATACTTGATGATGGATATAGATGGCGAAAATATGGACAGAAAGCTGTCAAGAACAACAAATTTCCCAGAAGCTACTACAGATGCACTCAACAAGGTTGCAAGGTGAAAAAACAAGTTCAAAGATTAACCAAAGACGAGGGAGTTATCGTGACCACTTACGAAGGCGTACATTCACATCCGATCGAGAAATCAACTGAAAATTTCGAGTACATTTTAAACCAAATGCAAATCTATACTTCTTAG 534 41.57 MESYPLMFGSSSSSTQLYSASSLSLPSHIDSETYSGCGRGNKGNGLLRSIPDDPTEMEFSGGIRNKFAPENDDPVKRKGEKKTRSPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTQQGCKVKKQVQRLTKDEGVIVTTYEGVHSHPIEKSTENFEYILNQMQIYTS 177
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3759636 3760904 + Bda005068.1 Bda11g00335 15443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00335 177 MobiDBLite consensus disorder prediction 31 86 - -
Bda11g00335 177 Pfam WRKY DNA -binding domain 100 157 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda11g00335 177 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 3 174 IPR044810 GO:0003700
Bda11g00335 177 SMART WRKY_cls 99 158 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda11g00335 177 Gene3D WRKY domain 83 158 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda11g00335 177 ProSiteProfiles WRKY domain profile. 94 159 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda11g00335 177 PANTHER WRKY TRANSCRIPTION FACTOR 75-RELATED 3 174 - -
Bda11g00335 177 MobiDBLite consensus disorder prediction 69 86 - -
Bda11g00335 177 SUPERFAMILY WRKY DNA-binding domain 91 158 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda08g00075 Bda11g00335 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g01384 Bda-Chr7:16682238 Bda11g00335 Bda-Chr11:3759636 5.75E-63 dispersed
Bda11g00335 Bda-Chr11:3759636 Bda02g00076 Bda-Chr2:2990854 1.41E-35 dispersed
Bda11g00335 Bda-Chr11:3759636 Bda05g00405 Bda-Chr5:49364112 1.02E-34 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16576 PF03106 WRKY 9.60E-26 CL0274 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00335 - - pvy:116131235 206.068