Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda11g00347 | ATGGGCAAGGAAAAGGTTCACATCAACATTGTGGTCATTGGTCATGTCGACTCTGGAAAATCAACCACTACTGGCCATCTCATCTACAAGCTAGGAGGCATTGACAAGAGAGTCATAGAGAGGTTCGAGAAGGAAGCAGCTGAAATGAACAAGAGATCCTTCAAGTACGCTTGGGTGCTCGACAAGCTTAAGGCTGAGCGGGAGCGTGGAATCACCATTGACATTGCTTTATGGAAGTTTGAGACTACAAAGTACTACTGTACGGTCATCGATGCTCCTGGACATCGTGATTTTATTAAGAATATGATTACTGGAACATCCCAAGCAGATTGTGCTGTGCTTATTATTGATTCCACCACTGGTGGTTTTGAAGCTGGTATTTCCAAGGATGGCCAGATGGATGCCACTACTCCCAAATATTCCAAGGGAAGATATGATGAAATTGTCAAAGAAGTATCCTCCTACCTGAAAAAGGTTGGGTACAACCCTGATAAAATTCCTTTCGTTCCCATCTCTGGTTTTGAGGGTGACAACATGATCGAAAGGTCGACAAACCTTGATTGGTACAAGGGCCCAACTCTCCTCGATGCTCTCGACATGATCCAGGAGCCCAAGAGGCCTTCAGACAAGCCCCTTCGACTTCCACTTCAGGACGTCTACAAGATCGGTGGCATTGGCACTGTCCCAGTTGGCCGAGTCGAAACGGGTGTTCTAAAACCTGGAATGGTGGTCACCTTCGGACCCACCGGACTGACCACTGAAGTCAAGTCTGTTGAAATGCACCATGAGGCTCTTCAGGAAGCTCTCCCCGGCGACAATGTCGGATTCAACGTGAAGAATGTGGCCGTAAAAGATCTTAAACGAGGCTTTGTCGCATCCAACTCCAAGGACGATCCTACCAAGGAGGCTGCCAACTTCACATCACAGGTTATTATCATGAACCACCCTGGCCAGATCGGAAATGGCTATGCCCCGGTCCTCGATTGCCACACCTCCCACATCGCTGTGAAGTTTGCAGAGATTCTTACGAAAATCGACAGACGGTCTGGTAAGGAGCTGGAGAAGGAGCCGAAGTTTTTGAAGAATGGTGATGCTGGAATGGTGAAGATGATTCCCACCAAGCCCATGGTGGTCGAGACCTTCTCCGAATATCCACCACTCGGTCGTTTTGCTGTCAGGGACATGCGGCAGACTGTGGCCGTCGGTGTTATAAAGAGCGTAGAGAAGAAGGATGCAAGCGGAGCCAAAGTCACCAAATCTGCTGCCAAGAAAGGAGGAAAGTAA | 1284 | 48.52 | MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQMDATTPKYSKGRYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDMIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPTKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDASGAKVTKSAAKKGGK | 427 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 3873899 | 3875876 | + | Bda005079.1 | Bda11g00347 | 15455 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda11g00347 | 427 | CDD | EF1_alpha_III | 301 | 404 | - | - | |
Bda11g00347 | 427 | Pfam | Elongation factor Tu domain 2 | 226 | 291 | IPR004161 | GO:0005525 | |
Bda11g00347 | 427 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 5 | 208 | IPR000795 | GO:0003924|GO:0005525 | |
Bda11g00347 | 427 | SUPERFAMILY | Translation proteins | 209 | 299 | IPR009000 | - | |
Bda11g00347 | 427 | Pfam | Elongation factor Tu C-terminal domain | 300 | 407 | IPR004160 | - | |
Bda11g00347 | 427 | PANTHER | TRANSLATION FACTOR | 1 | 132 | - | - | |
Bda11g00347 | 427 | ProSitePatterns | Translational (tr)-type guanine nucleotide-binding (G) domain signature. | 61 | 76 | IPR031157 | - | |
Bda11g00347 | 427 | PRINTS | GTP-binding elongation factor signature | 104 | 115 | IPR000795 | GO:0003924|GO:0005525 | |
Bda11g00347 | 427 | PRINTS | GTP-binding elongation factor signature | 9 | 22 | IPR000795 | GO:0003924|GO:0005525 | |
Bda11g00347 | 427 | PRINTS | GTP-binding elongation factor signature | 68 | 76 | IPR000795 | GO:0003924|GO:0005525 | |
Bda11g00347 | 427 | PRINTS | GTP-binding elongation factor signature | 88 | 98 | IPR000795 | GO:0003924|GO:0005525 | |
Bda11g00347 | 427 | Gene3D | Translation factors | 207 | 294 | - | - | |
Bda11g00347 | 427 | Gene3D | Translation factors | 301 | 408 | - | - | |
Bda11g00347 | 427 | SUPERFAMILY | EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 304 | 407 | IPR009001 | - | |
Bda11g00347 | 427 | PANTHER | ELONGATION FACTOR 1-ALPHA | 1 | 132 | - | - | |
Bda11g00347 | 427 | PANTHER | ELONGATION FACTOR 1-ALPHA | 132 | 425 | - | - | |
Bda11g00347 | 427 | Gene3D | - | 1 | 206 | IPR027417 | - | |
Bda11g00347 | 427 | PANTHER | TRANSLATION FACTOR | 132 | 425 | - | - | |
Bda11g00347 | 427 | CDD | EF1_alpha | 9 | 205 | - | - | |
Bda11g00347 | 427 | CDD | EF1_alpha_II | 208 | 298 | - | - | |
Bda11g00347 | 427 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 3 | 227 | IPR027417 | - | |
Bda11g00347 | 427 | Pfam | Elongation factor Tu GTP binding domain | 6 | 121 | IPR000795 | GO:0003924|GO:0005525 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda02g00774 | Bda-Chr2:48458204 | Bda11g00347 | Bda-Chr11:3873899 | 0 | dispersed | |
Bda09g01471 | Bda-Chr9:46517877 | Bda11g00347 | Bda-Chr11:3873899 | 0 | dispersed | |
Bda11g00347 | Bda-Chr11:3873899 | Bda15g00380 | Bda-Chr15:6732927 | 0 | dispersed | |
Bda11g00347 | Bda-Chr11:3873899 | Bda08g00037 | Bda-Chr8:299944 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda11g00347 | K03231 | - | mnt:21412438 | 831.247 |