Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00350 ATGCTTTCTGGGTTCTCTCAGGAAAGTTCGAGAATGTATTCGGCCCTCCACTCTCTCCCTCTCGACGTCAATATTCAGGGATCTTTGGAAGGAACCAACTTGCCCGGCGACGCTTGTTTGGTTCTTTCTTCTGATCCTAAACCCCGCCTCCGGTGGACGGCGGAGCTCCACGAGAGATTCGTTGACGCTGTAACTCAGCTTGGTGGCCCTGAAAAAGCAACACCTAAGACTATCATGAGGACAATGGGAGTAAAAGGCTTAACACTTTATCACTTGAAATCGCACCTCCAGAAATACCGGTTGGGGAAGCAATCGAGCAAGGAATTTATAGAGAATATGAAGGATGGGTCTAGCATTTCACAAAATCCGGACTCTACTTCCTCGCCTCTAACATCGCCAAGAATGATACCACAAGACGTGAATGATGGTTATCAGGTAACCGAGGCTTTGCGCGTTCAAATGGAAGTTCAGAGAAGACTACACGAGAAGCTGGAGGTGCAGCACCGGCTTCAAATTCGAATTGAAGCACAAGGAAAATACCTGCAAACGATCCTTGAGAAAGCATGTCAAGCTGTGAGTGATCAAGCTGCTGCCTCAGCCGGGCTCGAATCTGCAAGGGAAGAGCTGTCTGAGTTGGCAATTCAGGTTTCGACCAATTATCGAGGAATGGGCTCGAATGACACCCTCAAAATGCCATCTTTGTCAGAACTCTCTGCAGCTCTCGAAAATCGAAATGCTCCTCCCAATATTCCTTCTCGCATGGGCGATTGCTCAGTGGAGAGCAGCTTGACATCGGCTGGAAGTCCCGTTTCTTCAATGGGAATCGGCTCAACCACTACAGTATTGGAGAAGAGACCGAAATCATTGCTCGGAAACAGGGACTCGTTGCCTTTGGACCCGAACATTCGACACGAGATCGAATGGATGATGACAAACATTGGATGA 945 48.47 MLSGFSQESSRMYSALHSLPLDVNIQGSLEGTNLPGDACLVLSSDPKPRLRWTAELHERFVDAVTQLGGPEKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSSKEFIENMKDGSSISQNPDSTSSPLTSPRMIPQDVNDGYQVTEALRVQMEVQRRLHEKLEVQHRLQIRIEAQGKYLQTILEKACQAVSDQAAASAGLESAREELSELAIQVSTNYRGMGSNDTLKMPSLSELSAALENRNAPPNIPSRMGDCSVESSLTSAGSPVSSMGIGSTTTVLEKRPKSLLGNRDSLPLDPNIRHEIEWMMTNIG 314
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3890043 3894713 - Bda005083.1 Bda11g00350 15458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00350 314 MobiDBLite consensus disorder prediction 114 136 - -
Bda11g00350 314 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 12 311 IPR044848 GO:0003700
Bda11g00350 314 SUPERFAMILY Homeodomain-like 47 103 IPR009057 -
Bda11g00350 314 MobiDBLite consensus disorder prediction 244 279 - -
Bda11g00350 314 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 47 102 IPR006447 GO:0003677
Bda11g00350 314 MobiDBLite consensus disorder prediction 114 135 - -
Bda11g00350 314 MobiDBLite consensus disorder prediction 255 279 - -
Bda11g00350 314 PANTHER PROTEIN PHR1-LIKE 2 12 311 - -
Bda11g00350 314 Pfam MYB-CC type transfactor, LHEQLE motif 145 190 IPR025756 -
Bda11g00350 314 Gene3D - 46 104 - -
Bda11g00350 314 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 44 104 IPR017930 -
Bda11g00350 314 Pfam Myb-like DNA-binding domain 50 100 IPR001005 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g01256 Bda-Chr5:60368937 Bda11g00350 Bda-Chr11:3890043 5.05E-59 dispersed
Bda07g00065 Bda-Chr7:893250 Bda11g00350 Bda-Chr11:3890043 1.62E-52 dispersed
Bda11g00350 Bda-Chr11:3890043 Bda11g01213 Bda-Chr11:12502897 2.85E-43 dispersed
Bda14g00491 Bda-Chr14:3575195 Bda11g00350 Bda-Chr11:3890043 7.00E-69 transposed
Bda11g00350 Bda-Chr11:3890043 Bda13g00487 Bda-Chr13:5755722 1.15E-178 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16578 PF00249 Myb_DNA-binding 2.70E-07 CL0123 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00350 - - rcu:8280672 426.017