Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00353 GAAAATCAAATGGGTGGTGAAGGAAACGTCTTAACTTTGAAACAAGTTTCGGAGCACAACACGCCCAAGGACTGTTGGCTAATCATCAATGGCAAAGTGTATGATGTGACCAAGTTCTTGGAAGACCATCCTGGCGGCGATGACGTTCTGTTATCCGCTACCGGAAAGGATGCAACTGATGATTTTGAAGATGTGGGTCACAGTGACAGTGCAAGGGACATGATGGACAAATATTATGTTGGTGAGATTGATTCCTCGACTATTCCGAAAAAAACAACTTATGTGCCTCCAAAACAGCCTTATTACAATCAGGACAAGACATCGGAGTTCATCGTTAAGCTCCTCCAATTCCTCGTCCCGCTCGCTATATTGGGTTTGGCTGTCGGAGTTCGCTTCTACACGAAAGCAAGCTGA 414 45.17 ENQMGGEGNVLTLKQVSEHNTPKDCWLIINGKVYDVTKFLEDHPGGDDVLLSATGKDATDDFEDVGHSDSARDMMDKYYVGEIDSSTIPKKTTYVPPKQPYYNQDKTSEFIVKLLQFLVPLAILGLAVGVRFYTKAS 137
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3925250 3927290 + Bda005086.1 Bda11g00353 15461

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00353 137 PRINTS Cytochrome B5 signature 58 65 IPR001199 -
Bda11g00353 137 PRINTS Cytochrome B5 signature 33 43 IPR001199 -
Bda11g00353 137 PRINTS Cytochrome B5 signature 43 57 IPR001199 -
Bda11g00353 137 PRINTS Cytochrome B5 signature 71 83 IPR001199 -
Bda11g00353 137 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 8 84 IPR001199 -
Bda11g00353 137 PANTHER - 4 135 - -
Bda11g00353 137 Gene3D - 3 89 IPR036400 -
Bda11g00353 137 SMART Cyt_b5_2 11 84 IPR001199 -
Bda11g00353 137 Pfam Cytochrome b5-like Heme/Steroid binding domain 12 83 IPR001199 -
Bda11g00353 137 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 9 96 IPR036400 -
Bda11g00353 137 PANTHER CYTOCHROME B5 4 135 - -
Bda11g00353 137 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 39 46 IPR018506 GO:0020037
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00353 K23490 CYB5; cytochrome b5 - qsu:112039863 252.677
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00891 Bda-Chr5:57337444 Bda11g00353 Bda-Chr11:3925250 3.43E-50 dispersed
Bda07g01952 Bda-Chr7:36938338 Bda11g00353 Bda-Chr11:3925250 1.28E-64 dispersed
Bda11g00353 Bda-Chr11:3925250 Bda13g00400 Bda-Chr13:4962212 1.29E-50 dispersed
Bda11g00353 Bda-Chr11:3925250 Bda13g00491 Bda-Chr13:5773805 1.04E-90 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bda07g01952 . 1 134 NADPH P450 reductases AT5G53560 81.3 5.4e-61 230.3
Bda11g00353 . 4 137 NADPH P450 reductases AT5G53560 70.1 5.4e-53 203.8
Bda13g00491 . 1 134 NADPH P450 reductases AT5G53560 68.7 7.9e-52 199.9
Bda13g00400 . 7 143 NADPH P450 reductases AT5G53560 54.0 5.8e-39 157.1
Bda11g00353 . 4 137 NADPH P450 reductases AT5G48810 64.0 7.7e-50 193.4
Bda13g00491 . 1 134 NADPH P450 reductases AT5G48810 62.5 3.8e-49 191.0
Bda07g01952 . 1 134 NADPH P450 reductases AT5G48810 60.3 2.0e-45 178.7
Bda05g00891 . 1 139 NADPH P450 reductases AT5G48810 56.1 1.7e-41 165.6
Bda13g00491 . 22 133 NADPH P450 reductases AT2G32720 82.1 9.6e-50 193.0
Bda11g00353 . 25 136 NADPH P450 reductases AT2G32720 80.4 3.7e-49 191.0
Bda07g01952 . 22 133 NADPH P450 reductases AT2G32720 66.1 3.4e-39 157.9
Bda05g00993 BCT 2 281 NADPH P450 reductases AT5G17770 81.1 2.5e-132 468.4
Bda03g01493 BCT 2 253 NADPH P450 reductases AT5G17770 80.2 1.1e-116 416.4
Bda09g01304 . 7 325 NADPH P450 reductases AT5G17770 63.3 5.9e-110 394.0
Bda07g01952 . 1 134 NADPH P450 reductases AT5G53560 81.3 5.4e-61 230.3
Bda11g00353 . 4 137 NADPH P450 reductases AT5G53560 70.1 5.4e-53 203.8
Bda13g00491 . 1 134 NADPH P450 reductases AT5G53560 68.7 7.9e-52 199.9
Bda13g00400 . 7 143 NADPH P450 reductases AT5G53560 54.0 5.8e-39 157.1
Bda11g00353 . 4 137 NADPH P450 reductases AT5G48810 64.0 7.7e-50 193.4
Bda13g00491 . 1 134 NADPH P450 reductases AT5G48810 62.5 3.8e-49 191.0
Bda07g01952 . 1 134 NADPH P450 reductases AT5G48810 60.3 2.0e-45 178.7
Bda05g00891 . 1 139 NADPH P450 reductases AT5G48810 56.1 1.7e-41 165.6
Bda13g00491 . 22 133 NADPH P450 reductases AT2G32720 82.1 9.6e-50 193.0
Bda11g00353 . 25 136 NADPH P450 reductases AT2G32720 80.4 3.7e-49 191.0
Bda07g01952 . 22 133 NADPH P450 reductases AT2G32720 66.1 3.4e-39 157.9
Bda05g00993 BCT 2 281 NADPH P450 reductases AT5G17770 81.1 2.5e-132 468.4
Bda03g01493 BCT 2 253 NADPH P450 reductases AT5G17770 80.2 1.1e-116 416.4
Bda09g01304 . 7 325 NADPH P450 reductases AT5G17770 63.3 5.9e-110 394.0
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000252 4 9 3 5 3 5 9 4 4 3 4 4 8 5 5 9 5 6 9 4 5 4 5 5 4 4 4 10 5 2 156
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda11g00353 Bda_Chr11 FPKM 64.917137 57.388416 70.045357 64.112961 63.70385 68.491463 60.050171 59.965012 66.11808