Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda11g00398 | ATGCTAGTTCTTAGCTCTTCCGATTCGCGATTTCAACATTCCATTCTCATTCTTTTCTCTCTCTACTTTCTGATTTTTCTCTCATGGGTTTTCTCCTTGCAGCTCTATGGCGAACACTGGGAAATGGGTTTTTCAGAGCAGGGATTATTAGCCAACACTGAACAAGACGAAGATATATTTTCATCTGGGTTGGAAAATAGAATGCCGTTTTTGCAGATGTTACAGGAAGCTCCGCCATTGTTACCCTTTAAAGAGCTCGGATTTCAAACTTTGCTGAAATTGCAGCATTTCAGGGATCCATGGGAGGTCGACGAGCTGAAAATGGGAGAAAAAATTCAAACTTTCGAACTAGAAAGCTGTGTAACCCACGATTTGATGGACTTGCATTCCCCCAATAAATCAGAGAGCAATCAAATCGGATGGAACGAAGAGAAAAATTGTTTGAGAGAAGGAAGAACCAGTTCGAAGCAGACCCAGTTGGGGAAATCTGCAGTTCTAGTGAGAGAAAGAAGAAAGAGAAAGAGAGCGAAGCCATTGAAGAACAAGGAAGAAGTAGAGAGCCAAAGAATGACCCACATTGCAGTTGAGAGAAACCGGAGACGACAAATGAACGATCATCTCAACGTTCTTCGCTCTCTAATGCCGTCTTCTTACATTCAAAGAGGTGATCAAGCGTCAATCATCGGAGGAGCGATAAACTTCGTGAAAGAACTCGAACAACTCCTCCATTCTCTCGAGTCGCATCGAAGAACAAGAAACCCAGAAGGAAGCAGCTCTGCGAAAAACCAGTCTTCAGCTTCGTCCTCTTCCTCCGCCATAGCAATGGCTTCCAACGGCTTCTTCATAATCGGAGACGGAGTAACCGCAGAAAACAAATCGGAAACGGCAGATATTGAAGTGACAGTGATTCAAACCCACGTAAACTTGAAAATTCAGTGCGAGAGAAGGCCGAGACAGTTGGTGAAAGCCATTGTTGCACTCGAAGAGCTTAAGCTCACTGTTCTTCACCTCAACGTCACCACCTCACAATCTACAGTTCTTTATTCCTTCAATCTCAAGATAGAAGATGAGTGTAAACTAAGGTCAGCGGACGAGATAGCAGGATCAGTCCATCAAATTTTCAGCTACATCGACGGTAGATAA | 1143 | 43.66 | MLVLSSSDSRFQHSILILFSLYFLIFLSWVFSLQLYGEHWEMGFSEQGLLANTEQDEDIFSSGLENRMPFLQMLQEAPPLLPFKELGFQTLLKLQHFRDPWEVDELKMGEKIQTFELESCVTHDLMDLHSPNKSESNQIGWNEEKNCLREGRTSSKQTQLGKSAVLVRERRKRKRAKPLKNKEEVESQRMTHIAVERNRRRQMNDHLNVLRSLMPSSYIQRGDQASIIGGAINFVKELEQLLHSLESHRRTRNPEGSSSAKNQSSASSSSSAIAMASNGFFIIGDGVTAENKSETADIEVTVIQTHVNLKIQCERRPRQLVKAIVALEELKLTVLHLNVTTSQSTVLYSFNLKIEDECKLRSADEIAGSVHQIFSYIDGR | 380 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 4316949 | 4318378 | + | Bda005139.2 | Bda11g00398 | 15506 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda11g00398 | 380 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 187 | 238 | IPR011598 | GO:0046983 | |
Bda11g00398 | 380 | Gene3D | - | 178 | 267 | IPR036638 | GO:0046983 | |
Bda11g00398 | 380 | PANTHER | TRANSCRIPTION FACTOR BHLH70 | 43 | 379 | - | - | |
Bda11g00398 | 380 | SMART | finulus | 193 | 244 | IPR011598 | GO:0046983 | |
Bda11g00398 | 380 | MobiDBLite | consensus disorder prediction | 248 | 269 | - | - | |
Bda11g00398 | 380 | CDD | bHLH_AtFAMA_like | 190 | 252 | - | - | |
Bda11g00398 | 380 | Pfam | Helix-loop-helix DNA-binding domain | 188 | 239 | IPR011598 | GO:0046983 | |
Bda11g00398 | 380 | PANTHER | MAX DIMERIZATION, MAD | 43 | 379 | - | - | |
Bda11g00398 | 380 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 187 | 253 | IPR036638 | GO:0046983 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda11g00398 | Bda13g00490 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda07g01246 | Bda-Chr7:15306859 | Bda11g00398 | Bda-Chr11:4316949 | 1.57E-59 | dispersed | |
Bda08g00632 | Bda-Chr8:6507919 | Bda11g00398 | Bda-Chr11:4316949 | 3.04E-55 | dispersed | |
Bda11g00398 | Bda-Chr11:4316949 | Bda11g00562 | Bda-Chr11:5822685 | 2.94E-40 | dispersed | |
Bda13g00490 | Bda-Chr13:5769953 | Bda11g00398 | Bda-Chr11:4316949 | 6.97E-61 | transposed | |
Bda11g00398 | Bda-Chr11:4316949 | Bda13g00549 | Bda-Chr13:6468389 | 2.90E-176 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16585 | PF00010 | HLH | 4.70E-10 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda11g00398 | - | - | qsu:112008533 | 367.466 |