Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00409 ATGGAGAGGATTACGGAATCAAAAGCACTTCCTGCGACACTGTCAAACGTGCGTTTGCCTGTTGCTATAGAAGAAGCTGGTAGGGAAGTTCACAATTCAGACTCTCATGCTCTCGTAAGATCATGGAAAGGAAAAGCCTCTTTGCCTGAAGTACTTGTAACAGAAGCTTCAATGAAGGGCTGTACTGGTCCATTTGAGGAAGGTGGTCCAAGTTCATTCTCTGGGGCCAGTCATCCTCGAGAACCTGTTGATACAGATCCAATGAGAACCGTTTATGTACCAATAGGCCAAAATAAATCTGAGCCTGTTGGCCTTATAAGGAGCTTGTCTGTGAAAGGTCCCTTTCTGGACGATCTTTCAATCCGGGTTCCTGCGAAAAAACCAGCCACTGTTCTTTCTCCTGCAGAGAGTTCAGTGGAAGAAAATAATGATCTTGGCGCACCATCCCCACCATTTTCAGTTCAATGCACATCAAAAATTACTGAGAATGGCCTTCTCCTTCCTGATGCTGATGAAAAAGAATGTGTTTGGGATGCTTCTTTGCCTCCAAGTGGTAATGTTAGTCCGCTTAGCAGCATTGATAGCTCTGGTGTTGTCACAGCTATGAGCATTGTTAATAGCTGCGCTAGTACATATAGGAGTGATGCAATAACAAGTGATGGCATGCTTAGTGTGGAGAGAAACTGTGAGAGTACTAAAGGAAGTGTGAGAGGGGATTCACTTGAGAGTGCCAAAACAAGTATGAGCCGAGCAAGTGATAGTAGTGGTCTTAGTGATGATAGTAGCTGGAGCAAAATTACTGGAAGTGCTAATAAGCCTCACAAAGGAAATGATCCTAGGTGGAAGGCTATCCTTGCTATTCGAGCAAGAGATGGGATTTTGGGCATGAGTCACTTTAGATTGCTTAAAAGACTTGGATGTGGGGACATTGGCAGTGTCTATCTCTCAGAATTGAGTGCAACTCGCTGCTACTTTGCAATGAAAGTAATGGACAAGGCATCCCTTGCTAGTAGGAAGAAGTTGACGAGAGCTCAAACAGAAAGGGAAATTCTACAGTTACTGGATCATCCATTTCTACCTACCTTATACACTCATTTTGAAACCGACAGATTCTCATGTTTGGTCATGGAGTATTGTCCAGGGGGCGACCTGCACACTTTAAGACAACGGCAACCAGGGAAACATTTCTCTGAGTATGCTGCAAGATTTTATGCTGCTGAGGTTCTGCTGGCACTCGAGTATCTTCACATGCTTGGAGTTGTCTATCGAGACTTGAAACCTGAAAATGTACTGGTCCGTGATGATGGCCACATTATGCTCTCTGATTTTGACCTATCACTAAGATGTGCTGTTTCCCCTACCCTCATACGATCCTCATTTGACTCTGACCCTTCCAAACGCGGTGCTGGAGGTGCATTCTGTGTTCAACCTGCCTGCATTGAGCCCACATCTGTATGCATCCAACCTGCTTGTTTTCTTCCCCGAATCTTCCCCCAAAAGAGCAAGAAAAAAAGCCAAAGGCCTCGAACTGAGCTTGGGCTACTAGGAAACACCCTTCCTGAGCTTGTTGCCGAGCCTACTGCAGCCCGTTCAATGTCATTCGTAGGAACGCATGAATACCTAGCCCCAGAAATTATCAAAGGAGAGGGTCATGGAAGTGCCGTTGATTGGTGGACATTTGGCATTTTCTTGCACGAACTACTCTATGGTAAAACTCCATTCAAAGGCTCCGGAAATCGAGCCACACTTTTCAATGTGGTTGGCCAGCAACTCAAGTTCACTGAATCTCCAGCAACTAGCTATGCAAGCCGAGATCTAATAAGAGGTCTGCTAGTGAAAGAGCCACAAGATCGTTTAGGAGTTAAAAGGGGTGCAACTGAAATAAAGCAGCACCCTTTCTTTGAAGGTGTCAATTGGGCTTTGATTAGATGCAGTACGCCTCCAGAGGTGCCTAGACCAGTGGAGACCGAACCTGCTGGCAAACACGGCGCAGTTGACTCAATCGGCGTCGGAAGCAGTAGCAAGAGGATGGTAGGGACGGATGTGAAATCTGGGGGTAAATATCTCGACTTTGAGTTCTTTTGA 2085 45.71 MERITESKALPATLSNVRLPVAIEEAGREVHNSDSHALVRSWKGKASLPEVLVTEASMKGCTGPFEEGGPSSFSGASHPREPVDTDPMRTVYVPIGQNKSEPVGLIRSLSVKGPFLDDLSIRVPAKKPATVLSPAESSVEENNDLGAPSPPFSVQCTSKITENGLLLPDADEKECVWDASLPPSGNVSPLSSIDSSGVVTAMSIVNSCASTYRSDAITSDGMLSVERNCESTKGSVRGDSLESAKTSMSRASDSSGLSDDSSWSKITGSANKPHKGNDPRWKAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSATRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIRSSFDSDPSKRGAGGAFCVQPACIEPTSVCIQPACFLPRIFPQKSKKKSQRPRTELGLLGNTLPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLKFTESPATSYASRDLIRGLLVKEPQDRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPVETEPAGKHGAVDSIGVGSSSKRMVGTDVKSGGKYLDFEFF 694
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4409250 4412026 + Bda005151.1 Bda11g00409 15517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00409 694 CDD STKc_phototropin_like 297 653 - -
Bda11g00409 694 SUPERFAMILY Protein kinase-like (PK-like) 281 658 IPR011009 -
Bda11g00409 694 MobiDBLite consensus disorder prediction 64 86 - -
Bda11g00409 694 SMART serkin_6 299 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g00409 694 ProSiteProfiles Protein kinase domain profile. 299 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g00409 694 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 694 - -
Bda11g00409 694 Gene3D Transferase(Phosphotransferase) domain 1 530 651 - -
Bda11g00409 694 Pfam Protein kinase domain 531 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g00409 694 Pfam Protein kinase domain 300 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g00409 694 Gene3D Phosphorylase Kinase; domain 1 297 382 - -
Bda11g00409 694 Gene3D Transferase(Phosphotransferase) domain 1 383 450 - -
Bda11g00409 694 PANTHER FLIPPASE KINASE 1-RELATED 1 694 - -
Bda11g00409 694 MobiDBLite consensus disorder prediction 229 276 - -
Bda11g00409 694 MobiDBLite consensus disorder prediction 229 271 - -
Bda11g00409 694 ProSitePatterns Serine/Threonine protein kinases active-site signature. 420 432 IPR008271 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda11g00409 Bda13g00144 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g00409 Bda-Chr11:4409250 Bda12g00974 Bda-Chr12:40896033 0 dispersed
Bda07g00916 Bda-Chr7:10741313 Bda11g00409 Bda-Chr11:4409250 1.21E-66 transposed
Bda12g00539 Bda-Chr12:8548503 Bda11g00409 Bda-Chr11:4409250 0 transposed
Bda14g00484 Bda-Chr14:3481825 Bda11g00409 Bda-Chr11:4409250 0 transposed
Bda11g00409 Bda-Chr11:4409250 Bda13g00144 Bda-Chr13:1914433 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69892 PF00069 Pkinase 7.40E-37 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00409 - - nnu:104610497 1123.61