Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00425 ATCTTAACAATGGCTTTTTACTGTAATTCCTTCCTCAAAGTTGTTCTTCTCCTCTTGCTTTCGCTTTCCGGTTGCTTTTGCTTCCGCCGGAAGCTCACCTTCTACAACATTTCCGAGTCTCAATCCACCGACAGCTGGTCTGCTGCCAGGGCAACGTGGTATGGAAGCCCAACCGGAGCCGGAAGCAATGTAGGAGGAGCTTGTGGGTATGAAGAAGCAGTAGGGCAACCTCCATTTTCTTCACTCATAGCAGCTGGAGGGCCTTCACTGTTCAAATCAGGACAAGGATGTGGAGCTTGCTATCAGGTGATGTGCACGCAAAATTCGGCTTGCTCCGGCAGTCCGGTGACAGTGGTTATCACCGATAGTTGTCCAGGCGGTGATTGTGCTTCTGATGCTGTCCATTTTGACTTGAGTGGCACCGCGTTTGGGGGCATGGCTAAATCTGGACAAGAAGATCAACTTCGTGCGGCAGGAAGTCTTCAAATTCAATACCAAAGGGTCCAGTGCAGTTATCCCGGCACGCCCCTCACTTTTTCCATAGATGCAGGCTCGAATACGTATTACTTTGCAACGCTAATTGAGTATCAAGCCGGAGACGGTGATCTTTCTTTAGTAGAACTCAAGCAAGGATCGAACTCGTGGGTTCAAATGCAACACTCTTGGGGTGCTGTTTGGAAATTCAATAGTGGGTCGGCCTTTATGGGTAAAGCTCTAGGAGGGAACATGAGGACCCATGGCATCGGTGACGGGATTGGTCGTATAGACGATGACGACGATCTTGCAGGAGAATGGGACGAAAAAATTCATGATAAAGTTGTCCGTTCGATCAACAAACGGCCGATGTATGCTCTCCGAACAAACCCTAATCGTCTCAAAACTTCTAGGATTTGCGAGAATTGCGGCCAAGAATTCTTGTCGTGGAAATCCTTTCTCGAACACGGAAAATGCACCTCCGATGATGCTGAATCACTCGTGTCATCCCCTGACTCCGATGGCGATATCGACGGCCGACAAGGGAATGGATGCAAAAGAAAACGATCACTTCGAGTGAAAGTCGATAATTTCAGCCCTAATTGCCCATCGAGCGAAGAAGAAGAGCTAGCGAATTGCTTGATGATGTTGTCAAATGCAAATGCCTCCGATAGTTTTTTGTCCGAGCAAGAGGAGTCGTGTGCATCGGCGAGCAAAGAAGACGACCGGAGAAACCCCATGAACGGCCGGAGAAACACGATGAATTATCTCTCACCTATTTCCGGCAAAATTCGTCGAGATATCGAAAAATCAAAATCGATTTCTTCTAAGGGAATTTTCGAGTGTAAAGCTTGTAAAAAAGTGTTCAATTCTCACCAAGCTTTAGGTGGCCACAGAGCAAGCCACAAGAAGGTTAAAGGCTGTTTTGCAGCTAAGCTAGATCAAACAGAAGATAGTCTGGAAAACTACGACGTTATAACCCAGGAAGATCATCAATTCATCTTCTCCGCTAAATCGAGCTCCAGCTTACAGCTCTTCAACGGCGGAACCTTTAGCAGTAATCCTCCATTAATGGCTTCCACCTCTAAGAAAAGGACAAAAATCCACGAGTGCTCCATTTGTCACCGGATTTTCACTACTGGGCAAGCTTTAGGCGGCCATAAACGCTGCCATTGGATAACCTCCTCCGCAGCAGAAAACTCCACACGAGCGAAAATCCCCCATTTACAAAATCAACTGGAGCAGATAAACAATAACAACAACGCGAAAGATTCGCTTGATCTGAACTTTCCGGCGCCGGCGGACGAACGAGTTTCAACTCCGGCGAACATTCAAGTATCTACCTCGATTTATTTACAGTCATGGATAAAAGGAAAGGAAAAGGAAGAAGAAGATGACAGCCAGTTCTATCACCGTCACCTGTATCAGATTAACGAGAACGAAAAGTACAGAAACGATGACGACGACGCTATGATTCAGAAGGCGGACGACGAAGCAGACAGTAAGGTGAAGCTAGCAAAACTTGGTGAGCTTAAGCATAAGAATATCAATGGCGGTTCATCGCCATGGTTGCAGATGGGAATCGGTTCAACCACTGATGTAGGAGCTGACCCTTGA 2091 46.92 ILTMAFYCNSFLKVVLLLLLSLSGCFCFRRKLTFYNISESQSTDSWSAARATWYGSPTGAGSNVGGACGYEEAVGQPPFSSLIAAGGPSLFKSGQGCGACYQVMCTQNSACSGSPVTVVITDSCPGGDCASDAVHFDLSGTAFGGMAKSGQEDQLRAAGSLQIQYQRVQCSYPGTPLTFSIDAGSNTYYFATLIEYQAGDGDLSLVELKQGSNSWVQMQHSWGAVWKFNSGSAFMGKALGGNMRTHGIGDGIGRIDDDDDLAGEWDEKIHDKVVRSINKRPMYALRTNPNRLKTSRICENCGQEFLSWKSFLEHGKCTSDDAESLVSSPDSDGDIDGRQGNGCKRKRSLRVKVDNFSPNCPSSEEEELANCLMMLSNANASDSFLSEQEESCASASKEDDRRNPMNGRRNTMNYLSPISGKIRRDIEKSKSISSKGIFECKACKKVFNSHQALGGHRASHKKVKGCFAAKLDQTEDSLENYDVITQEDHQFIFSAKSSSSLQLFNGGTFSSNPPLMASTSKKRTKIHECSICHRIFTTGQALGGHKRCHWITSSAAENSTRAKIPHLQNQLEQINNNNNAKDSLDLNFPAPADERVSTPANIQVSTSIYLQSWIKGKEKEEEDDSQFYHRHLYQINENEKYRNDDDDAMIQKADDEADSKVKLAKLGELKHKNINGGSSPWLQMGIGSTTDVGADP 696
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4511861 4515944 + Bda005169.1 Bda11g00425 15533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00425 696 Gene3D - 171 244 IPR036749 -
Bda11g00425 696 Gene3D Classic Zinc Finger 435 549 - -
Bda11g00425 696 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 65 175 IPR007112 -
Bda11g00425 696 ProSitePatterns Zinc finger C2H2 type domain signature. 529 549 IPR013087 -
Bda11g00425 696 PRINTS Expansin/Lol pI family signature 215 229 IPR007118 GO:0005576
Bda11g00425 696 PRINTS Expansin/Lol pI family signature 87 105 IPR007118 GO:0005576
Bda11g00425 696 PRINTS Expansin/Lol pI family signature 64 82 IPR007118 GO:0005576
Bda11g00425 696 PRINTS Expansin/Lol pI family signature 45 60 IPR007118 GO:0005576
Bda11g00425 696 PRINTS Expansin/Lol pI family signature 158 174 IPR007118 GO:0005576
Bda11g00425 696 Pfam C2H2-type zinc finger 438 462 - -
Bda11g00425 696 Pfam C2H2-type zinc finger 527 551 - -
Bda11g00425 696 MobiDBLite consensus disorder prediction 677 696 - -
Bda11g00425 696 ProSiteProfiles Zinc finger C2H2 type domain profile. 438 465 IPR013087 -
Bda11g00425 696 SUPERFAMILY beta-beta-alpha zinc fingers 437 549 IPR036236 -
Bda11g00425 696 Pfam Lytic transglycolase 84 165 IPR009009 -
Bda11g00425 696 MobiDBLite consensus disorder prediction 322 342 - -
Bda11g00425 696 ProSitePatterns Zinc finger C2H2 type domain signature. 440 460 IPR013087 -
Bda11g00425 696 ProSiteProfiles Zinc finger C2H2 type domain profile. 527 549 IPR013087 -
Bda11g00425 696 Pfam Expansin C-terminal domain 178 233 IPR007117 -
Bda11g00425 696 SMART c2h2final6 527 549 IPR013087 -
Bda11g00425 696 SMART c2h2final6 438 460 IPR013087 -
Bda11g00425 696 SMART dpbb_1 83 165 IPR007112 -
Bda11g00425 696 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 188 265 IPR007117 -
Bda11g00425 696 PANTHER OS02G0659100 PROTEIN 235 692 - -
Bda11g00425 696 SUPERFAMILY PHL pollen allergen 176 232 IPR036749 -
Bda11g00425 696 Gene3D - 31 170 IPR036908 -
Bda11g00425 696 MobiDBLite consensus disorder prediction 391 412 - -
Bda11g00425 696 MobiDBLite consensus disorder prediction 392 406 - -
Bda11g00425 696 SUPERFAMILY Barwin-like endoglucanases 38 174 IPR036908 -
Bda11g00425 696 PRINTS Major pollen allergen Lol pI signature 147 162 IPR005795 GO:0005576|GO:0019953
Bda11g00425 696 PRINTS Major pollen allergen Lol pI signature 85 96 IPR005795 GO:0005576|GO:0019953
Bda11g00425 696 PRINTS Major pollen allergen Lol pI signature 195 210 IPR005795 GO:0005576|GO:0019953
Bda11g00425 696 PRINTS Major pollen allergen Lol pI signature 125 140 IPR005795 GO:0005576|GO:0019953
Bda11g00425 696 PRINTS Major pollen allergen Lol pI signature 179 194 IPR005795 GO:0005576|GO:0019953
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda11g00425 Bda13g00315 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00439 Bda-Chr6:6461659 Bda11g00425 Bda-Chr11:4511861 9.39E-33 dispersed
Bda11g00423 Bda-Chr11:4504147 Bda11g00425 Bda-Chr11:4511861 3.72E-116 dispersed
Bda11g00425 Bda-Chr11:4511861 Bda13g00660 Bda-Chr13:7549017 3.42E-58 dispersed
Bda13g00614 Bda-Chr13:7191697 Bda11g00425 Bda-Chr11:4511861 2.52E-29 dispersed
Bda14g00052 Bda-Chr14:444965 Bda11g00425 Bda-Chr11:4511861 1.51E-21 dispersed
Bda14g00868 Bda-Chr14:6691933 Bda11g00425 Bda-Chr11:4511861 7.02E-09 dispersed
Bda11g00424 Bda-Chr11:4507453 Bda11g00425 Bda-Chr11:4511861 5.48E-114 tandem
Bda07g00447 Bda-Chr7:5775219 Bda11g00425 Bda-Chr11:4511861 2.44E-21 transposed
Bda07g01790 Bda-Chr7:33827970 Bda11g00425 Bda-Chr11:4511861 6.91E-59 transposed
Bda11g00425 Bda-Chr11:4511861 Bda13g00315 Bda-Chr13:4020064 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16588 PF03330 DPBB_1 1.50E-16 CL0199 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00425 - - tcc:18614376 500.745