Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00450 GTTTTTTCAGCAATGGGAAGGTCTTTTCTTCAAGTTGCTGCTACAGAGGAGGTTGCTCCCCCTCTCAGAGTGGTTCAGATTGAAGGATTGGTAATCTTAAAGATAATCAAACACTGCAAAGAGTTTTCACCAGCTCTTGTCACAGGGCAACTTCTCGGATTAGATGTTGGTAGCATTCTAGAAGTTACTAACTGCTTTCCTTTCCCGATTCGAGAAGAAGATGAGGAGATTGAAGCAGAGGGTGCTAATTATCAGCTCGACATGATGAGATGTTTGAGAGATGTCAATGTTGACAATAACACCGTTGGATGGTACCAATCTACCTTCTTAGGTTCCTATCAAACATCAGAATTGATCGAAACCTTTATGAATTACCAGGAAAGTATTAGACGGTGTGTCTGCATAATTTATGATCCATCGCGATCCAATCAGGGTGTCTTAGCTCTCAAGGCATTGAAGCTTTCTGATTCATTTATGGAGCTTTACAGAACTAAAAATTTTACAGGGAGAAAGGAGAACAACTTATCTTGGGTGGATATATTTGAAGAAATACCTATTAAAGTTCTGAATTCTGCCCTTATCAGTGCTTTTATGTCAGATCTGGAAGCAGATACCCCGTCACTCAGTTTTCTTTTTCAGTGTGACTATGATCGGCTGCAACTTTCTACGAAACCTTTTGTGGAAAGGAATATTGAATTTCTGATTGAATGTATGGATGATTTGTCAGGGGAACAGCAAAAGTTCCAATTCTATAATCGAAATCTGTCGCGTCAGCAAGCTCAGCAGCAAGCATGGCTTCAGAAAAGAAGAACTGAGAACATGGCGCGAAAAGCAGCTGGTGAAGAACCTTTACCAGAGGAGGATCCTTCAAATCAAATCTTTAAGCCTGTTGCCGAGCCATCGCGGCTGGATAGCTTCCTCATAACAAATCAAATTGGAAACTACTGTAACCAAATAAATGGGGTTGCTGGACAAAGCTTTAGCAGATTGTACTTGATGAAAGCATTGCACGACAAC 1017 40.81 VFSAMGRSFLQVAATEEVAPPLRVVQIEGLVILKIIKHCKEFSPALVTGQLLGLDVGSILEVTNCFPFPIREEDEEIEAEGANYQLDMMRCLRDVNVDNNTVGWYQSTFLGSYQTSELIETFMNYQESIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRTKNFTGRKENNLSWVDIFEEIPIKVLNSALISAFMSDLEADTPSLSFLFQCDYDRLQLSTKPFVERNIEFLIECMDDLSGEQQKFQFYNRNLSRQQAQQQAWLQKRRTENMARKAAGEEPLPEEDPSNQIFKPVAEPSRLDSFLITNQIGNYCNQINGVAGQSFSRLYLMKALHDN 339
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4765998 4769766 - Bda033028 Bda11g00450 15558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00450 339 Hamap Eukaryotic translation initiation factor 3 subunit H [EIF3H]. 20 339 IPR027524 GO:0003743|GO:0005737|GO:0005852
Bda11g00450 339 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 23 127 IPR000555 GO:0005515|GO:0008233|GO:0008237
Bda11g00450 339 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT H 4 339 - -
Bda11g00450 339 Pfam C-terminal region of eIF3h 143 337 IPR045810 -
Bda11g00450 339 SMART pad1_6 24 157 IPR000555 GO:0005515|GO:0008233|GO:0008237
Bda11g00450 339 MobiDBLite consensus disorder prediction 271 293 - -
Bda11g00450 339 ProSiteProfiles MPN domain profile. 25 158 IPR037518 -
Bda11g00450 339 CDD MPN_eIF3h 23 288 IPR027524 GO:0003743|GO:0005737|GO:0005852
Bda11g00450 339 Gene3D Cytidine Deaminase, domain 2 4 211 - -
Bda11g00450 339 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED 4 339 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00221 Bda-Chr3:1712338 Bda11g00450 Bda-Chr11:4765998 2.37E-07 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00450 K03247 - twl:120014291 561.992