Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda11g00476 | ATGGATAAGGACAAACCTCAAAGCCACGGTGGAGGTTTCCCTCCACCCTCAGGTCGTTATGGAGGGTTTTCGCCTCCTGGAAGCAATTATAATGTCAAATCTGAATCTTCTTCTTCATCGATGTCATTTCTGCCTATGGCTCCTGGTGTGAGTTTAGACGCCGGTCATTTCGGCCTTGGACTATCGACTGATTCTAATCGTTTTAGCCATGATATTAGTCGAATGCATGATAATCCACGAAAAAATATGGGTCATCGACGTGCCCATTCTGAAATCCTGACTCTTCCGGATGATATTAGTTTTGATAGCGATCTAGGAGTTGTTGGTGGGGCTGATGGTCCTTCAATGTCTGATGATACTGAGGAAGATTTGTTATCTATGTACCTTGATATGGATAAATTCAATTCATCATCTGCTTCATCAGCATTTGAAGTGGGTGATCCTTCTGCTGCTTCACCGTCTGTATCAATGAAGGGAGTCTTGACTTCTTCGACTGAGAATGTTGCCTTTGGTTCGAATGAGAGGCCTAGAGTTAGGCACCAGCATAGCCTGTCCATGGATGGGTCAACAACAATCAAGCCAGAGATGCTCGTATCTGGTTCTGAAGATCTATCGACAGCTGACTGTAAGAAGGCTATATCAGCTGCAAATTTAGCGGAGCTTGCCATAATTGATCCAAAAAGAGCAAAGAGAATCTGGGCAAATAGGCAGTCAGCTGCTAGATCAAAGGAAAGAAAGATGCGTTACATTACTGAGTTGGAACGAAAAGTGCAGACATTACAAACGGAAGGAACTTCTTTATCTGCTCAGTTGACCCTATTGCAGAGAGATACTGATGGTCTCACGGCTGAGAATAGTGAACTTAAACTGCGCTTGCAAACAATGGAGCAACAAGTTCACCTACAAGATGCTCTGAATGATGCTCTGAAAGAAGAAATTCAGCATCTTAAAGTACTAACTGGACAAGCCATGGCTAATGGCGGATCCTTGATGAATTTTACCTCTTTAGGAGGCGGCCATGGCCAGCAAATGTACACAAACAGCCACGCCATGCAGACCCTTTTAACGGCACAGCAGTTTCAGCAGCTCCAGATTCAGTCCCAGAAGCAACAGCAATTTCAGCAACACCAACTTCATCACCTTCAACAGCAACAAATGCAGCAACTTGCTGGAGAAATGAAATTAAGAACACCCGTTTATTCTCTGACTCCAAAGGATACTAATGGTTCAGATATGAGCTCATCTGCTTCAAAGGACTGCTGA | 1263 | 43.94 | MDKDKPQSHGGGFPPPSGRYGGFSPPGSNYNVKSESSSSSMSFLPMAPGVSLDAGHFGLGLSTDSNRFSHDISRMHDNPRKNMGHRRAHSEILTLPDDISFDSDLGVVGGADGPSMSDDTEEDLLSMYLDMDKFNSSSASSAFEVGDPSAASPSVSMKGVLTSSTENVAFGSNERPRVRHQHSLSMDGSTTIKPEMLVSGSEDLSTADCKKAISAANLAELAIIDPKRAKRIWANRQSAARSKERKMRYITELERKVQTLQTEGTSLSAQLTLLQRDTDGLTAENSELKLRLQTMEQQVHLQDALNDALKEEIQHLKVLTGQAMANGGSLMNFTSLGGGHGQQMYTNSHAMQTLLTAQQFQQLQIQSQKQQQFQQHQLHHLQQQQMQQLAGEMKLRTPVYSLTPKDTNGSDMSSSASKDC | 420 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 4994943 | 4998142 | - | Bda005214.1 | Bda11g00476 | 15584 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda11g00476 | 420 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 225 | 288 | IPR004827 | GO:0003700|GO:0006355 | |
| Bda11g00476 | 420 | PANTHER | TRANSCRIPTION FACTOR POSF21-RELATED | 7 | 412 | - | - | |
| Bda11g00476 | 420 | PANTHER | TRANSCRIPTION FACTOR POSF21-RELATED | 7 | 412 | - | - | |
| Bda11g00476 | 420 | MobiDBLite | consensus disorder prediction | 400 | 420 | - | - | |
| Bda11g00476 | 420 | CDD | bZIP_plant_RF2 | 228 | 277 | IPR044759 | GO:0003700|GO:0006355 | |
| Bda11g00476 | 420 | Gene3D | - | 226 | 300 | - | - | |
| Bda11g00476 | 420 | SUPERFAMILY | Leucine zipper domain | 227 | 277 | IPR046347 | GO:0003700|GO:0006355 | |
| Bda11g00476 | 420 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - | |
| Bda11g00476 | 420 | Pfam | bZIP transcription factor | 227 | 283 | IPR004827 | GO:0003700|GO:0006355 | |
| Bda11g00476 | 420 | MobiDBLite | consensus disorder prediction | 27 | 41 | - | - | |
| Bda11g00476 | 420 | Coils | Coil | 243 | 270 | - | - | |
| Bda11g00476 | 420 | MobiDBLite | consensus disorder prediction | 401 | 420 | - | - | |
| Bda11g00476 | 420 | SMART | brlzneu | 223 | 287 | IPR004827 | GO:0003700|GO:0006355 | |
| Bda11g00476 | 420 | Coils | Coil | 278 | 312 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Bda11g00476 | Bda13g00254 | BCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda09g01565 | Bda-Chr9:47199338 | Bda11g00476 | Bda-Chr11:4994943 | 4.33E-58 | dispersed | |
| Bda11g00476 | Bda-Chr11:4994943 | Bda14g00204 | Bda-Chr14:1426835 | 1.05E-54 | dispersed | |
| Bda11g00476 | Bda-Chr11:4994943 | Bda13g00254 | Bda-Chr13:3223467 | 3.50E-08 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 16592 | PF00170 | bZIP_1 | 2.80E-09 | CL0018 | Bda | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda11g00476 | - | - | zju:107405095 | 561.222 |