Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00494 ATGGAGAAGAAAGAAGAGGCTAAAACTGAGAATTCCAGTATGGCAAATTCTTCCCTCATGTTCTCCGATGAGATGCCGGCGACCTTTGCTTTATCTGGCATCTTCGACATCCCACGTGAGACCAAAAATCAATCCTTAGGCTTTTTCGATGTGTTGGGTATCGAAGATTACAGTGAATCCTTATTCGATGTCTTTTCCATGCCGTTGTTTGCGCCGGAACCGCATTCTACCTTCCCGGAGTCATCGGAGGTGCTGAATACTCCGGCGACGCCTAACTCTCCTTCAATTTCTTCATCCTCTAACGAAGCGGCGAATGATGAACAGACGAAAGCTGGAGACGAGGATGAGAAAGATCACGAAAAGACTAATAAACATTTGAAAACGAAGAAGAAGAAGCAGAAACGGCAAAGAGAGCCGAGATTTGCGTTTATGACGAAGAGCGAAGTCGACCAGTTAGACGATGGCTACCGATGGCGGAAATACGGCCAGAAGGCTGTAAAAAACAGCCCCTATCCGAGGAGCTATTATCGTTGCACCACCGCCGGCTGCGGCGTGAAAAAACGGGTAGAACGATCCTCCGAAGACTCTTCCATCGTCGTCACAACCTACGAAGGCCAACACACTCATCAGTTACCACTAACGCCGCGTGGAAACATCGGAATTTCACCGGAAATGGGCGGCGGATTCAACTCCCCATTATCTCTCCCGACAATTCAAATCAGCCACCAAAATCAACAACCCTATATGTACAACCCGCTACCTTCTTTTGGCTCAGCCATTTTTAACCCTTCTTTTCCATCGACTTTTTCTCAGAACAAACTTGCTGGTTCGTCCTCTCCTTCTTTACTTGCAGACCATGGGCTTCTTCAAGATATTCTTCCATTTCAGACCCGGAAGGAGGAATCGTAA 909 47.3 MEKKEEAKTENSSMANSSLMFSDEMPATFALSGIFDIPRETKNQSLGFFDVLGIEDYSESLFDVFSMPLFAPEPHSTFPESSEVLNTPATPNSPSISSSSNEAANDEQTKAGDEDEKDHEKTNKHLKTKKKKQKRQREPRFAFMTKSEVDQLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSEDSSIVVTTYEGQHTHQLPLTPRGNIGISPEMGGGFNSPLSLPTIQISHQNQQPYMYNPLPSFGSAIFNPSFPSTFSQNKLAGSSSPSLLADHGLLQDILPFQTRKEES 302
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5270703 5271813 - Bda005231.1 Bda11g00494 15602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00494 302 MobiDBLite consensus disorder prediction 75 141 - -
Bda11g00494 302 ProSiteProfiles WRKY domain profile. 147 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda11g00494 302 Coils Coil 116 136 - -
Bda11g00494 302 SMART WRKY_cls 152 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda11g00494 302 Gene3D WRKY domain 137 213 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda11g00494 302 PANTHER WRKY TRANSCRIPTION FACTOR 48-RELATED 62 294 - -
Bda11g00494 302 SUPERFAMILY WRKY DNA-binding domain 144 212 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda11g00494 302 Pfam WRKY DNA -binding domain 153 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda11g00494 302 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 62 294 IPR044810 GO:0003700
Bda11g00494 302 MobiDBLite consensus disorder prediction 107 123 - -
Bda11g00494 302 MobiDBLite consensus disorder prediction 79 106 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda03g01188 Bda11g00494 CCT
Bda03g01188 Bda11g00494 ECH
Bda11g00494 Bda13g00224 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00211 Bda-Chr1:25263861 Bda11g00494 Bda-Chr11:5270703 2.34E-23 dispersed
Bda01g00218 Bda-Chr1:25523164 Bda11g00494 Bda-Chr11:5270703 7.85E-24 dispersed
Bda03g01188 Bda-Chr3:14265918 Bda11g00494 Bda-Chr11:5270703 7.51E-53 dispersed
Bda11g00494 Bda-Chr11:5270703 Bda15g00853 Bda-Chr15:13353748 5.51E-48 dispersed
Bda11g01338 Bda-Chr11:14798679 Bda11g00494 Bda-Chr11:5270703 3.74E-25 transposed
Bda08g00075 Bda-Chr8:701243 Bda11g00494 Bda-Chr11:5270703 9.62E-35 transposed
Bda11g01358 Bda-Chr11:15805064 Bda11g00494 Bda-Chr11:5270703 3.87E-32 transposed
Bda14g01185 Bda-Chr14:11728735 Bda11g00494 Bda-Chr11:5270703 1.19E-33 transposed
Bda11g00494 Bda-Chr11:5270703 Bda13g00224 Bda-Chr13:2849666 7.16E-166 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16597 PF03106 WRKY 1.80E-26 CL0274 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00494 - - csin:114308380 327.02