Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00498 AGTGCAAATGCAACAGTGCTCGGAGTTCCTCTTCCTGCCAACCTCGTCTTCAACGACGCCAGCCCGGAATGGATGAACAAAGCCGACAACGCTTGGCAACTTACGGCAGCAACGCTTGTCGGGCTACAGAGCGTTCCGGGGCTGATAATTCTGTACGGTGCGGCGGTGAAGAAGAAATGGGCTATAAACTCGGCGTTCATGGCGCTCTACGCCTTTGCCTGCGTTCTTATCTGTTGGGTTTTATGGGGTTATAGATTGTCGTTCGGAGATAAACTTATTCCTTTTTGGGGAAAAGTTAATTTCGCTGTAGACCAGAAGTTCTTGCTTAATCAAACATTTTCTGGGTTGTTCCCTAACGCTACAATGGTGTATTTCCAGTTCGTCTTTGCAGCGATTACTTTGATTCTGATCGCTGGTGCAGTTTTGGGTCGGATGAATTTTTTTGCTTGGATGCTGTTTGTGCCTTTATGGCTTACTTTTTCCTACACCGTCGGAGCGTTTTCCATTTGGAGTCCAAACGGATTCCTCTTCAAACTCGGACTCATCGATTATTCCGGCGGTTATGTCATTCATCTGTCGTCAGGAGTGGCTGGTTTCACCGCAGCATATTGGGTGGGTCCTCGCATGTCGACTGACCGGGAAAACTTTCCGCCGAACAACATCCTTCTCATGCTCGCCGGAGCGGGTTTGCTCTGGATGGGTTGGACGGGGTTCAACGGAGGAGACCCTTATGTCGCCAGTATTGATGCTTCGTTGGCTGTTTTGAACACTCATGTCTGCACTGCAGCGAGTCTCCTCACTTGGCTTGCTCTCGATGTCGTCTTCTTTCGAAAACCTTCCATTATCGGCGCCGTTCAAGGCATGATCACTGGTTTGGTCTGCATTACTCCCGCTGCTGGTGTAGTCCAAGGATGGGCAGCAATAGTAATGGGAATATTATCAGGCTCAATTCCATGGTTTACGATGATGGTTGTCCACAAGAAATCTAAGCTCCTCCAAAAGGTGGACGACACAATGGCCGTCTTCCACACCCACGCGGTGGCCGGAAGCCTCGGCGGAATCCTTTCCGGCCTCTTTGCCCATCCAAGACTATGCTACTTGTTTTATAGCGGCTACGGCAACTATGTCGGGCTATTTTACGGCTTCCAAATGGGAATTTTCCATAAGGGGTTTCGGCAAATCGGAATTCAACTTCTCGGGATCTTATTTATCGTCACTCTCAATGTTCTGACTACAAGTTTGATCTGTTGGTTGGTGCGGTTGATTGTTCCGCTCAGGATGTCTGAAGCAGACATGATCGTCGGAGACGAAGCAGCTCACGGGGAAGAAGCTTATGCCATATGGGGAGATGGAGAAAAGCTCAAAAAATTTAAGCAT 1377 48.87 SANATVLGVPLPANLVFNDASPEWMNKADNAWQLTAATLVGLQSVPGLIILYGAAVKKKWAINSAFMALYAFACVLICWVLWGYRLSFGDKLIPFWGKVNFAVDQKFLLNQTFSGLFPNATMVYFQFVFAAITLILIAGAVLGRMNFFAWMLFVPLWLTFSYTVGAFSIWSPNGFLFKLGLIDYSGGYVIHLSSGVAGFTAAYWVGPRMSTDRENFPPNNILLMLAGAGLLWMGWTGFNGGDPYVASIDASLAVLNTHVCTAASLLTWLALDVVFFRKPSIIGAVQGMITGLVCITPAAGVVQGWAAIVMGILSGSIPWFTMMVVHKKSKLLQKVDDTMAVFHTHAVAGSLGGILSGLFAHPRLCYLFYSGYGNYVGLFYGFQMGIFHKGFRQIGIQLLGILFIVTLNVLTTSLICWLVRLIVPLRMSEADMIVGDEAAHGEEAYAIWGDGEKLKKFKH 459
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5304751 5306726 - Bda033037 Bda11g00498 15606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00498 459 PRINTS Rhesus blood group protein signature 253 275 IPR002229 GO:0005887
Bda11g00498 459 PRINTS Rhesus blood group protein signature 126 142 IPR002229 GO:0005887
Bda11g00498 459 PRINTS Rhesus blood group protein signature 222 240 IPR002229 GO:0005887
Bda11g00498 459 PANTHER AMMONIUM TRANSPORTER MEP2 9 456 IPR001905 GO:0008519|GO:0016020|GO:0072488
Bda11g00498 459 PANTHER AMMONIUM TRANSPORTER 9 456 - -
Bda11g00498 459 SUPERFAMILY Ammonium transporter 24 427 - -
Bda11g00498 459 Gene3D Ammonium transporter AmtB like domains 13 448 IPR029020 -
Bda11g00498 459 TIGRFAM amt: ammonium transporter 29 445 IPR001905 GO:0008519|GO:0016020|GO:0072488
Bda11g00498 459 ProSitePatterns Ammonium transporters signature. 183 208 IPR018047 GO:0008519|GO:0016020|GO:0072488
Bda11g00498 459 Pfam Ammonium Transporter Family 31 445 IPR024041 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00918 Bda-Chr5:57768064 Bda11g00498 Bda-Chr11:5304751 0 dispersed
Bda11g00498 Bda-Chr11:5304751 Bda13g01021 Bda-Chr13:11961441 2.43E-43 dispersed
Bda10g00200 Bda-Chr10:6968556 Bda11g00498 Bda-Chr11:5304751 0 transposed
Bda13g01007 Bda-Chr13:11811952 Bda11g00498 Bda-Chr11:5304751 4.16E-51 transposed
Bda11g00498 Bda-Chr11:5304751 Bda13g00219 Bda-Chr13:2791677 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00498 K03320 - fve:101303013 756.133