Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00528 ATGCAACGAGAGACTCTTATCAACTCCGAAGGAGAACTTAGAGTAAGCTTTGGTTATCAATGCAACAGCACCGGAGGCAGCAATTACGAAGTTCTTAGCGGATACAAGATTCAGCCCCAAATCCAAAAAACGAGCAGTTTCTCTTGCTTGTCCGGAGCTGCTTTAAGCGCAAATGCTACTCTAGCAAATACAAATATATGCAATGGCCTGATAGGGGCAGAAATACTTCCTAGTTTGGACTCTCCCAATTCATTTCGACGAATTCCTTCTTCTCCGAACATTTCAAGACTCGATATTTTGTCGTCTTCTCTACAAAGCAACTTCTCTTACTTAAGTTGCAGTCCGCCCTCTCCGCGTGATCATGATTTATACTCTTTGAAATCCATGAGTGCTCCTTCGAAAAATGAAGGTTTTCTGAATGCAACTGAGGTACAAGTGGCCGGAGGAGCTGCCGGAGAAGATAGAGTCCAAGCTGTTTGTTCTGAAGAAAATGGGTGGCTCTTTTGTGCGATTTATGACGGATTCAACGGTCGAGATGCAGCTGATTTTCTGGCCGGTACATTGTATGAAACCATTATATATTATTTTAACCTCACGGAAATTGATGGGTCACTTCAATATGCCCTTGATGATGGCAATAACTGTCATAGAGAATCGGATACAGATGTTAATAACATCTTTTGGAGTAGTTCGTTTCGTAAAAACGACACGGCTAAAGATTCATTCAGGCTTGCAGTTCTTGATAGTCTCCAACGGGCTCTCAGCCAGGCCGAGAATGATTTTCTGTACATGGTCGAACAAGAAATGGAGGATCGTCCAGATTTGGTTTCTATTGGTTCCTGTGTTTTAATAGTGCTTCTTCATGAAAAAGATTTGTACTCGTTGAATTTAGGCGATAGTCGAGTAGTCTTAGCTACGATTGGCGAATGCACTAATGTGCGTGAAAATGAGAAGCTCATAGCAGTTCAGCTTACTGAAAGTCACACAGTCGATAACGAAGCTGAACGAACTCGACTACAACACGATCATCCAGACGATCCTATGGTCGTCGTTGGCGGAAAAGTTAAAGGAAAACTGAAGGTCACTCGAGCATTTGGAGTCGGGTATTTGAAGAAGAAAAAGCTGAATGATGCACTTATGGGTATCTTAAAAGTTCGCAATCTTATAAGTCCTCCCTACATATCTACCCAGCCAGTGATGAACGTCCATAGAATTTCAAATTCAGATCTCTTTGTCATTGTAGCAAGCGACGGATTGTTCGATTTTTTCACAAATGAAGAAGCAGTAGAGCTGGTACATTCCTATATCACGATCAACCCTTCTGGTGATCCTGCAAAATTTCTACTCGAGCAGCTAATGCTGAGAGCTGCTGATTGTGCAGGCTTTACAATGGAAGAGTTGATGAATATTCCGGCTGGTAGACGGAGGAAGTACCACGACGATGTTACTGTCATGGTTATCATCCTCGGAACAAACCAGCGGACGACAAAGGCGTCGACTTTTATGGTTTAA 1512 42.59 MQRETLINSEGELRVSFGYQCNSTGGSNYEVLSGYKIQPQIQKTSSFSCLSGAALSANATLANTNICNGLIGAEILPSLDSPNSFRRIPSSPNISRLDILSSSLQSNFSYLSCSPPSPRDHDLYSLKSMSAPSKNEGFLNATEVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYETIIYYFNLTEIDGSLQYALDDGNNCHRESDTDVNNIFWSSSFRKNDTAKDSFRLAVLDSLQRALSQAENDFLYMVEQEMEDRPDLVSIGSCVLIVLLHEKDLYSLNLGDSRVVLATIGECTNVRENEKLIAVQLTESHTVDNEAERTRLQHDHPDDPMVVVGGKVKGKLKVTRAFGVGYLKKKKLNDALMGILKVRNLISPPYISTQPVMNVHRISNSDLFVIVASDGLFDFFTNEEAVELVHSYITINPSGDPAKFLLEQLMLRAADCAGFTMEELMNIPAGRRRKYHDDVTVMVIILGTNQRTTKASTFMV 503
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5564139 5566312 + Bda005263.1 Bda11g00528 15636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00528 503 PANTHER PROTEIN PHOSPHATASE 2C 2 501 IPR015655 GO:0004722|GO:0006470
Bda11g00528 503 SMART PP2C_4 129 487 IPR001932 -
Bda11g00528 503 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 2 501 - -
Bda11g00528 503 Pfam Protein phosphatase 2C 246 439 IPR001932 -
Bda11g00528 503 Gene3D - 121 498 IPR036457 -
Bda11g00528 503 SUPERFAMILY PP2C-like 151 490 IPR036457 -
Bda11g00528 503 CDD PP2Cc 151 489 IPR001932 -
Bda11g00528 503 ProSiteProfiles PPM-type phosphatase domain profile. 138 489 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g01506 Bda-Chr9:46826262 Bda11g00528 Bda-Chr11:5564139 1.55E-12 dispersed
Bda11g00528 Bda-Chr11:5564139 Bda14g00624 Bda-Chr14:4685272 6.19E-40 dispersed
Bda11g00528 Bda-Chr11:5564139 Bda08g00622 Bda-Chr8:6381269 1.05E-13 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00528 - - qsu:111988457 742.265