Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00591 ATGGACACTCCGGAGAGGAACAAGATTGGGTCTACTTCTGTCTCTAAATTTGAGGACTCCCCTGTCTTTAACTATATCAACAGTCTTTCCCCAATAAAGCCAGTTAAGTCTACTCACATTACTCAGGCTTTCAACCCATTGAGTTTTGCAGCTCTTCCATCTGTTTTTACGTCACCACATGCCAGTTCTCACAAGGAATCAAGATTCCTGCGAAGGCATAATAATTATTCAGATCCATCAGAACCTGAGCTTCCTTCTGCCAATGGGAATAAAGATTGTACAAGTGAAGGAGGTGCTTTGGACGTTTCTCAACTCTATAATAACTCAACTGGTCCCGAGGAAAACTTTGATTCGGGGGTTTCAAGGAGTAATTTATCCATTGATCCTCTGAATAATCACCCAAAATCAATTGAAGAATTACAGAGATTGAATCGCTACACTACTATCCCCAACGGTGATCCAATGAATCCAGGTGTTTTTCAAGTGGATGGTTTGTCAGAATTTGCTGGCACTTCAGATTTAATTATATCCAATGGTAAAAACCACCATGAAAATGGTTCATCTGAACCTATAAGGGAGGGGATGGGATATGACTGGGAAGGTTTGATCGCTGATGGTGCTGACCTGTTAATATTTGCTTCTCCTAATGGATCAGAGGCCATTAGACTAATACAAAAACCGTTGGAGCCTTTAACAGAATATTCTCCAACTATTATGGGAGTACAAAATGATAGCAACAATATGCAAATTATACCAATTGTCAATCCTGCCGATTCTTGTGGACAGCATGAAGCAGAAGGACCTTCCTCTCACCATGCAGAAACTCGGGACCTGGATGGGCATCAGAAGTTGGAGATTGTTACCTATTCTAATTCCGAAAAGTGTATGACACATTGTTCTGGGGAAAACATCCATAATGAGGCGGCTAGTGACTGTCCAATTTATCGGGAGCCTATCTCTACTTTGCATCGTGGTCTGCGGAGGCGCTGTTTGGATTTCGAGACAGTTGGTACACACAAAAAGAACTTAGGCGAAGGTTCAACCGCTGGTGAAAACCTTGCCTCCAACAATAAGCAACTGCTCCGCTGTAAATCAGCAGGAAGTTCATCTATGTATGTTTTGAATGGAATAGGTTTGCACTTAAATGCCCTAGCAGCAAACTCAAAGGGCTACAGAGATGTCAATCACGAAAAATTGGCATACAGAAGACAACTAAGTCTGCCCAGCACCACTGCACTTTATCCTTCCCCTACAACAGAAGAGGAATCTTTCTTGGCTTCTGCTGTTTCCGAAAAGGATGCAGATCCTTCTGAATATGCAGTTCAGATGGATGAAGATGCTTCTCATGCATCACCTTATGTTTTAGGTGAAGATTTCAATCAGAATAGTCCCAAAAAGAAGAGGCATGTGACATGTCAAGTTGACTATTTAATAAAAAAAGATTTATTGTCATGCAGTTATTGTGAATGCTTTGCTGCTGGTGTCTACTGCATTGAACCATGTTCATGTCAAGAATGTTTTAATAAACCAATCCATGAAGATACAGTTCTTGCAACTCGCAAGCAGATCGAGTCTCGCAATCCCCTTGCATTTGCGCCTAAAGTGATTAGAAATTCTGAAACTGTGCCTGAACTTGGGGATGAATCCAGCAAAACCCCAGCCTCGGCTCGACATAAAAGAGGATGCAACTGCAAAAAATCAAGTTGTCTGAAGAAATACTGCGAATGCTATCAGGGTGGGGTTGGATGTTCCATTAGTTGCAGATGTGAAGGGTGTAAGAATGCATTTGGGAGAAAGGATGGTTCAGTTCTTATGGAATTAGAGACCGAGCAAGATGAAGACGAAACAGAAGCTAGTTTGAAGAGTGTGGCGAAAAAACCTTCACCTCTGGGAACTGAAATACAGCACAATGAAGAGCAGAATTCTGGTCCTCTTCTTCCCACAACACCATTACATCTTTGCAGGCCAATGGTTCCGCTGCCATTTTCATCCAGGACGAAACTAGGTTCTTCTTTTCTTATCACCGGATCTTCCTCCGGGTTATACACCAGCCAAAAACTCGAAAAGCCTAATATTCTTGGACCTCAACTCAAGTTAGACAAAAACATGAAAGCTGTTTCGGAAGATGAGATGCCGGAGATTCTTCGGACCGATAGCTCTCCACGCGTTAAGACAACTTCCCCCAACAGTAAGAGAGTCTCTCCACCTAAGAGCGACTTTGGATCGTCGCCCTTTCCAAGAACTGGTCGGAAGTTGATTCTACAATCCATCCCTTCATTTCCTTCTCTAACTCCGCAGCACTGA 2304 42.62 MDTPERNKIGSTSVSKFEDSPVFNYINSLSPIKPVKSTHITQAFNPLSFAALPSVFTSPHASSHKESRFLRRHNNYSDPSEPELPSANGNKDCTSEGGALDVSQLYNNSTGPEENFDSGVSRSNLSIDPLNNHPKSIEELQRLNRYTTIPNGDPMNPGVFQVDGLSEFAGTSDLIISNGKNHHENGSSEPIREGMGYDWEGLIADGADLLIFASPNGSEAIRLIQKPLEPLTEYSPTIMGVQNDSNNMQIIPIVNPADSCGQHEAEGPSSHHAETRDLDGHQKLEIVTYSNSEKCMTHCSGENIHNEAASDCPIYREPISTLHRGLRRRCLDFETVGTHKKNLGEGSTAGENLASNNKQLLRCKSAGSSSMYVLNGIGLHLNALAANSKGYRDVNHEKLAYRRQLSLPSTTALYPSPTTEEESFLASAVSEKDADPSEYAVQMDEDASHASPYVLGEDFNQNSPKKKRHVTCQVDYLIKKDLLSCSYCECFAAGVYCIEPCSCQECFNKPIHEDTVLATRKQIESRNPLAFAPKVIRNSETVPELGDESSKTPASARHKRGCNCKKSSCLKKYCECYQGGVGCSISCRCEGCKNAFGRKDGSVLMELETEQDEDETEASLKSVAKKPSPLGTEIQHNEEQNSGPLLPTTPLHLCRPMVPLPFSSRTKLGSSFLITGSSSGLYTSQKLEKPNILGPQLKLDKNMKAVSEDEMPEILRTDSSPRVKTTSPNSKRVSPPKSDFGSSPFPRTGRKLILQSIPSFPSLTPQH 767
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6035569 6039840 + Bda005332.1 Bda11g00591 15699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00591 767 MobiDBLite consensus disorder prediction 100 131 - -
Bda11g00591 767 SMART CXC_2 557 598 IPR033467 -
Bda11g00591 767 SMART CXC_2 465 512 IPR033467 -
Bda11g00591 767 ProSiteProfiles CRC domain profile. 466 597 IPR005172 -
Bda11g00591 767 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 767 - -
Bda11g00591 767 MobiDBLite consensus disorder prediction 258 279 - -
Bda11g00591 767 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 767 IPR044522 GO:0003700
Bda11g00591 767 MobiDBLite consensus disorder prediction 719 737 - -
Bda11g00591 767 MobiDBLite consensus disorder prediction 73 132 - -
Bda11g00591 767 MobiDBLite consensus disorder prediction 625 646 - -
Bda11g00591 767 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 560 595 IPR005172 -
Bda11g00591 767 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 486 509 IPR005172 -
Bda11g00591 767 MobiDBLite consensus disorder prediction 79 93 - -
Bda11g00591 767 MobiDBLite consensus disorder prediction 710 748 - -
Bda11g00591 767 MobiDBLite consensus disorder prediction 265 279 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda03g00875 Bda11g00591 CCT
Bda03g00875 Bda11g00591 ECH
Bda11g00591 Bda13g00106 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00544 Bda-Chr5:53146525 Bda11g00591 Bda-Chr11:6035569 1.46E-08 dispersed
Bda11g00591 Bda-Chr11:6035569 Bda11g01097 Bda-Chr11:10752029 3.81E-23 dispersed
Bda11g00591 Bda-Chr11:6035569 Bda13g00106 Bda-Chr13:1467741 0 wgd
Bda11g00591 Bda-Chr11:6035569 Bda03g00875 Bda-Chr3:7585006 1.33E-178 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16605 PF03638 TCR 1.90E-11 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00591 - - csv:101203694 800.816