Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda11g00593 | ATGGCTTTCATCTGCAGAAAAATGAAGGAATCATACGTTACAGTACTTCTATGGAGCCTCATCGCCATGGCACTTCTCCCAAGGCCGTGCCAAGCTTCTTCCTTTCCCCCACCCCCTCAAAACCCTAGACTGCTCAAGGCTTACACAGCTCTGCAAGCATGGAAACACGCCATCACCTCCGACCCAAAGAACCTCACCAGCAATTGGTGCGGCCCGAACGTCTGCAACTACACTGGTGTATTCTGTGCTCCGGCCCCAGATGATCCTCACATGGATACCGTCGCCGGAATAGACCTTAACCACGGCGACATAGCCGGCTCGCTGCCGGAGGAGCTCGGCCTGTTGACCGACCTCGCTCTCTTTCACATCAATTCTAACCGCTTTTGCGGTACCATTCCGAGCAGTCTTTACAAACTCTACCTTCTTTTTGAGTTCGACGTCAGCAACAATCAATTTTCCGGGAAGTTTCCTCCTGTTCTTCTCTCTCTTCCTTCGCTGAGTTATCTGGATATCCGATTCAATAACTTTCAAGGCGATGTTCCGTCTCGTCTTTTTGACCTGAAGCTCGATGCTCTTTTCATCAACAACAACAATTTCCAGTTCTCGCTTCCGAGAAACTTAGGAAATTCGACGGCTTCTGTGATTGTTTTGGCCAATAATAAGCTCAGCGGTTGTCTCCCTCCAAGTTTGGCAAAAATGAAGGAAACCTTAGTTGAAATAATCCTGATTAACATTGGATTGACTGGTTGTTTACCTCCAGAAATAGGGTTGCTCACCCAACTGACGGTCTTTGATGTCAGCAATAATAATCTCGTCGGGACGTTGCCGGAATCAATGGGGGGAATGAAAAGCTTGGAGCAGTTAAACGTGGCGAATAACAAGTTATCAGGAGAAATTCCGGCGAGCATTTGCTCATTGCCCAAGTTAGAGAATTTCACGTATTCAAACAACTACTTCTGCGGTGAGCCGCCGGTATGTCTCAAGCTGCGGGCGAAAGATGATCGGAAGAATTGTATTCCATACAGGCCTCTTCAACGGTCGAAGGAGGAGTGCGCCGCCTTCTACTCTCATCCCGTTGACTGTGGTTCTTTTAGTTGCACGCGGAAAAGTCCTCCGCCGCCACCACCGCGCTCGCCTCCGCCTCCTCCTCCAATAACTTATTAA | 1164 | 48.97 | MAFICRKMKESYVTVLLWSLIAMALLPRPCQASSFPPPPQNPRLLKAYTALQAWKHAITSDPKNLTSNWCGPNVCNYTGVFCAPAPDDPHMDTVAGIDLNHGDIAGSLPEELGLLTDLALFHINSNRFCGTIPSSLYKLYLLFEFDVSNNQFSGKFPPVLLSLPSLSYLDIRFNNFQGDVPSRLFDLKLDALFINNNNFQFSLPRNLGNSTASVIVLANNKLSGCLPPSLAKMKETLVEIILINIGLTGCLPPEIGLLTQLTVFDVSNNNLVGTLPESMGGMKSLEQLNVANNKLSGEIPASICSLPKLENFTYSNNYFCGEPPVCLKLRAKDDRKNCIPYRPLQRSKEECAAFYSHPVDCGSFSCTRKSPPPPPPRSPPPPPPITY | 387 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 6051484 | 6052647 | - | Bda005334.1 | Bda11g00593 | 15701 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda11g00593 | 387 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 6 | 31 | 375 | - | - | |
Bda11g00593 | 387 | Pfam | Leucine rich repeat | 260 | 317 | IPR001611 | GO:0005515 | |
Bda11g00593 | 387 | Gene3D | Ribonuclease Inhibitor | 212 | 339 | IPR032675 | - | |
Bda11g00593 | 387 | Pfam | Leucine rich repeat N-terminal domain | 49 | 82 | IPR013210 | - | |
Bda11g00593 | 387 | SUPERFAMILY | L domain-like | 47 | 328 | - | - | |
Bda11g00593 | 387 | Gene3D | Ribonuclease Inhibitor | 47 | 211 | IPR032675 | - | |
Bda11g00593 | 387 | MobiDBLite | consensus disorder prediction | 368 | 387 | - | - | |
Bda11g00593 | 387 | MobiDBLite | consensus disorder prediction | 365 | 387 | - | - | |
Bda11g00593 | 387 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 31 | 375 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda03g00050 | Bda-Chr3:623551 | Bda11g00593 | Bda-Chr11:6051484 | 1.21E-132 | dispersed | |
Bda03g00230 | Bda-Chr3:1783340 | Bda11g00593 | Bda-Chr11:6051484 | 3.00E-120 | dispersed | |
Bda09g01162 | Bda-Chr9:42437508 | Bda11g00593 | Bda-Chr11:6051484 | 2.01E-147 | dispersed | |
Bda11g00593 | Bda-Chr11:6051484 | Bda15g00023 | Bda-Chr15:1609102 | 1.14E-78 | dispersed | |
Bda11g00593 | Bda-Chr11:6051484 | Bda11g01541 | Bda-Chr11:47731550 | 5.75E-07 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda11g00593 | - | - | jre:108989444 | 559.681 |