Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00596 ATGAGGGCCGGAGCGCAGACGTTCCGGTCTATACTGGACAAACCCCTCAACCAGCTAACCGAGGATGACATTTCTCAGCTCACCCGGGAAGACTGCCGCAAATATCTCAAAGAAAAAGGAATGCGTAGGCCTTCCTGGAACAAATCGCAGGCCATCCAGCAGGTCATATGTCTGAAAGCCTTGCTCGAACCCGGGGACGATTCAGGCTCCACTGCTCTCAGAAAGGTCGGCGTCTCCCCGCGCGTTACTTTAAATCAAGGCAATGATGACCAAATACCATTGTCAGCTGCAGAATTAAATCCACAAAGTAGATTGGAGCCTCCAACATATTCTTCTGAGGATGCAACAGCTGACCCAGAAAACAAAACTGGCAGTCCGAGATTTCAATGCGCAAAAAAGAAGTTGGTTGAGCAAATGTCGATTTTTTATGGGGGGAAGGTAAATGTGTACGACGGAGTGCCACCAGAGAAGGCTCATACAATAATTAATATTGCAGCCAGTCCAATCCATTTACCCCAAGATGATCGGATTGATGGAACGACAATAGTTTGGCCTTTTCCATGCCTTTTTCCAAGTACTTACGAAAGGGATTCCTCTTTTTCTCCTTGCGACTCTATTAGCGAGACCATCCAAGCTGTAGAGAGTCAGGTAAACCGAAAAGTCTCGCTCCAAAGATATCTAGAAAAGCGAAAAGACAGAGAAAGATTGAAGACCAAGAAAAACGTGGGTTTGACTTCCAGCCTCAAGGTCTATTTTAACAATCATGCCAGAGTTGACATGTCAGATGGAAACTCAAACCGGACTAATTCAAGCTTCCCCTCTCAATCTGGGTTACCACAACGAGCTTTCGATAGGATGGTCAGGTCTAACATCGGTTGTCTTCCAATTGACCTCAACATCAAAGATCTCCATGAGTTCTGA 921 45.93 MRAGAQTFRSILDKPLNQLTEDDISQLTREDCRKYLKEKGMRRPSWNKSQAIQQVICLKALLEPGDDSGSTALRKVGVSPRVTLNQGNDDQIPLSAAELNPQSRLEPPTYSSEDATADPENKTGSPRFQCAKKKLVEQMSIFYGGKVNVYDGVPPEKAHTIINIAASPIHLPQDDRIDGTTIVWPFPCLFPSTYERDSSFSPCDSISETIQAVESQVNRKVSLQRYLEKRKDRERLKTKKNVGLTSSLKVYFNNHARVDMSDGNSNRTNSSFPSQSGLPQRAFDRMVRSNIGCLPIDLNIKDLHEF 306
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6070796 6073191 + Bda005337.1 Bda11g00596 15704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00596 306 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 211 281 IPR040390 -
Bda11g00596 306 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 6 197 IPR040390 -
Bda11g00596 306 SMART tify_2 132 167 IPR010399 -
Bda11g00596 306 PANTHER PROTEIN TIFY 4B-LIKE ISOFORM X1 211 281 - -
Bda11g00596 306 PANTHER PROTEIN TIFY 4B-LIKE ISOFORM X1 6 197 - -
Bda11g00596 306 MobiDBLite consensus disorder prediction 82 127 - -
Bda11g00596 306 MobiDBLite consensus disorder prediction 82 123 - -
Bda11g00596 306 Pfam tify domain 138 166 IPR010399 -
Bda11g00596 306 Pfam Jas motif 216 236 IPR018467 -
Bda11g00596 306 ProSiteProfiles Tify domain profile. 132 167 IPR010399 -
Bda11g00596 306 MobiDBLite consensus disorder prediction 259 278 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda08g00254 Bda11g00596 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g00596 Bda-Chr11:6070796 Bda12g01051 Bda-Chr12:42294557 1.26E-07 dispersed
Bda11g00596 Bda-Chr11:6070796 Bda08g00254 Bda-Chr8:2622065 1.01E-69 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16606 PF06200 tify 2.80E-13 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00596 - - csv:101204377 295.049