Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00620 ATGTCCAAAATTGTTCACCTACACAAGTCACTCACCTTTTCTGAGATCTCGAAGCTGAAAAACGAGATCTTCAGCTCCGACGGCGTTATAAACCTCGTGTCCACCGACGAGGTTTATCTTCTCGAGCTCGCTTTAACCGAGAAGCTTGGGGAACTGAACCATGTGGCCAGTGTGGTCTCGAGACTGGGGAAAAGGTGTGTTGAACCGGCCTTGCATGGCTTTGAGCACGTGTACTCAGACATTGTTAGCGGCGTCATCGAAGTTAAGGAATTGGGATTTTTGGTGAAGGATATGGATGGAATGGTGAGGAAGATGGAGCGATACGTGAATGCTACAGCCAATCTGTACAGTGAAATGGAGGTTTTGAATGAATTGGAGCAGGCGATTAAGAAGTTTCAGAATAATCAGCACGAGGAGAGTCGGAAAGTGTTCGAGCAAAAAGTTATGTGGCAGAAAGAAGATATCAGACATCTCAAGGACATTTCAATTTGGAACCAAACGTATGATAAGGTTGTAGAGCTCTTGGCGAGGACTGTATGTACAGTGTATGCTAAGATTTGTCTTGTCTTCGGGGACGAAGATTCGAAGAAAAATGGTACTACCCTCTTTCAAGGAGCGGATTCTCAACCAGTAAATGACGACTATTTTGGTTTGGAGCAGTTTAAATTGAAGCGACTTCATAGTAATAGTAATCAGCCACATTCAGGGCCGATAGGGAGTGCGCCTATAAAGAAAAGGATGTCAAGTTTTAAGCCTCAGCTTGAATCAAGAAGAGATGAAGTAGCAGCCATTCGAGCAGAAGATTTTAATTTTCCATGTGGAACGAGCCCAGGCCGACTTTTCATGGACTGCCTTAGTCTAAGCAGCTCAATTTCAATGCTGGACAAAGAGGATGATGACGTAGATCATAGAGACCAAAGTAGTCACATTTCAAGTGGGTTTAAAAGGGAGCATTCGATTTATTCAGGTTCATTAAGCCGAACAAACACAAGTGTTCATTTAACTGGAGAACAAAAGCAACCAAAAAGTTCGATGAGTAATAGTGCAGGGTCTGGTCCGAGGAGTAGGTTATCTGTTTATGCTCCTCCTTCCACTGTTGGAGGCTCTGCTTTGGGCCTACATTATGCAAATGTGATCATTGTGATCGAGAAGTTGCTCCGTTATCCTCATCTCGTGGGAGAGGAGGCTAGAGATGATTTATATCAGATGTTACCAACGAGCTTAAGAACATCTCTTAAGACCCATTTGAAGGCATACGTAAAGAATCTAGCTATATATGATGCCCCCCTCGCCCACGATTGGAAAGAGACTCTAGATGGGATTTTAAGATGGCTGGCTCCCCTGGCACATAACATGATAAGGTGGCAAAGTGAACGTAATTTCGAACAGCATCAAATCGTCACACGAACTAATGTTCTTCTTCTTCAAACACTGTACTTTTCTGATCGAGAAAAGACAGAAGCAGCTATTTGTCAACTTCTAGTTGGGTTAAATTACATATGTCGTTATGAGCATCAACAGAATGCGTTATTGGACTGTGCTAGCAGTTTTGATTTTGAAGACTGCATGGAATGGCAAATGCAGTGCAAATCTTCTTATCTCAACTGA 1608 42.97 MSKIVHLHKSLTFSEISKLKNEIFSSDGVINLVSTDEVYLLELALTEKLGELNHVASVVSRLGKRCVEPALHGFEHVYSDIVSGVIEVKELGFLVKDMDGMVRKMERYVNATANLYSEMEVLNELEQAIKKFQNNQHEESRKVFEQKVMWQKEDIRHLKDISIWNQTYDKVVELLARTVCTVYAKICLVFGDEDSKKNGTTLFQGADSQPVNDDYFGLEQFKLKRLHSNSNQPHSGPIGSAPIKKRMSSFKPQLESRRDEVAAIRAEDFNFPCGTSPGRLFMDCLSLSSSISMLDKEDDDVDHRDQSSHISSGFKREHSIYSGSLSRTNTSVHLTGEQKQPKSSMSNSAGSGPRSRLSVYAPPSTVGGSALGLHYANVIIVIEKLLRYPHLVGEEARDDLYQMLPTSLRTSLKTHLKAYVKNLAIYDAPLAHDWKETLDGILRWLAPLAHNMIRWQSERNFEQHQIVTRTNVLLLQTLYFSDREKTEAAICQLLVGLNYICRYEHQQNALLDCASSFDFEDCMEWQMQCKSSYLN 535
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6256678 6258285 - Bda005364.1 Bda11g00620 15728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00620 535 PANTHER PLANT/PROTEIN (DUF668) 1 529 - -
Bda11g00620 535 Coils Coil 115 142 - -
Bda11g00620 535 MobiDBLite consensus disorder prediction 227 249 - -
Bda11g00620 535 Pfam Protein of unknown function (DUF668) 365 454 IPR007700 GO:0045927
Bda11g00620 535 PANTHER BNAC09G50660D PROTEIN 1 529 - -
Bda11g00620 535 MobiDBLite consensus disorder prediction 325 354 - -
Bda11g00620 535 Pfam Domain of unknown function (DUF3475) 1 48 IPR021864 GO:0045927
Bda11g00620 535 MobiDBLite consensus disorder prediction 325 359 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda11g00620 Bda13g00078 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00652 Bda-Chr6:9030199 Bda11g00620 Bda-Chr11:6256678 2.99E-26 dispersed
Bda06g00654 Bda-Chr6:9104965 Bda11g00620 Bda-Chr11:6256678 5.04E-27 dispersed
Bda11g00620 Bda-Chr11:6256678 Bda14g00044 Bda-Chr14:410534 9.71E-37 dispersed
Bda11g00620 Bda-Chr11:6256678 Bda13g00078 Bda-Chr13:999355 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00620 - - zju:107422972 767.303