Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00657 ATGTCTCAGGATGTCATGTCAAGAAGAACTTTAGAACTCAAAGTCGCAGGGTTTTTAGTTTTAGCTCTGCTTGTTTGCTCCTCCCAATGTTTAAATTTTGAAGGGCTTTCTCTTTTAGAGCTGAAAAACAATCTTCTAGATGAATTTGATTCTTTGGGAAACTGGAATTCCTATGATCAAACACCCTGTGGGTGGATTGGAGTAAATTGCACAACCGATCATGAGCCGGTTGTATGGTCTATCAACTTGAGTATGATGAATCTTTCTGGACCCTTAAGCCCCAGCATTGGGAATCTGGTTCACCTAACTTATCTGAATCTAGCCTATAATGGGTTCAGCGGAAACATTTCAAAAGAGATTGGTAACTGTTCTGGATTGGAATATCTTTTTCTGAACAATAACATGTTTGATGGGGAAATTCCATTTGAGTTGGGTAGGTTGTCATCTTTGACGAGTTTGAATCTATGCAATAACAGAATCAGTGGTCCAATACCAGAAGATCTTGGAAACTTGACCTCATTAGTGGAGTTTGTGGCATATACTAATGAAATCACAGGCCCATTGCCTCATTCCATTGGAAATCTTAAGAATTTGGTCACTTTCAGAGCAGGACAAAATGCAATTTCTGGTAGCATACCGGAAGAAATAGGCGGGTGTGAGAGTTTGAAACTGCTTGGTCTTGCTCAAAACCAAATAGGAGGGGAAATACCAAAGGAAGTTGGATTTCTTAAAAGCTTAAAGGAACTGATTCTATGGGATAATCAGTTGTCAGGTTTCATTCCGGAGGAAATTGGTGAGTGCAAAAGCCTCGAGACTATAGCTTTATACAAAAACAATCTTGTTGGACCTATTCCGAAGCAAATGGGGGAACTCGCCTCTTTGAAGAAGTTGTATATTTACAGGAATGGGCTGAATGGAACAATTCCAAAGGAAATTGGTAATCTTTCTCATGTGACAGAAATCGATTTCTCGGAGAATTTTTTAACGGGTGGAATACCGATGGAACTCAGCAAGATAAACGGCCTACGGTTACTTCACCTCTTTCAAAATAAGTTTACTGGCGTTATACCAAATGAACTAAGTAACTTGCATAACTTGACAGAGCTTGACCTTTCGATTAATTACCTGGAAGGTCCCATTCCGACGGGCTTTCAATATCTGACTAAAATGATTCAGCTTCTGCTCTTTGACAACTCTCTGAGTGGTGGCATTCCTCAGGAACTTGGACTTTACGGCAAACTCTGGGTCATTGATTTCTCACACAACAACCTGACGGGAAGAATACCTGATCATCTCTGTCATAATTCCAATTTGATTTTATTAAATCTGGACTTTAACAAGCTGAATGGAAACATTCCTTCTGGGATGTTGAACTGTAGCTCATTGATGCAACTTCGTCTCGTCGGGAATAGGCTTAGTGGGAGCTTTCCTTCTGAACTATGCAACTTGATGAATCTTTCTGCTATTGAGTTGGACCAGAATGAATTCAGTGGTCTTATCCCTCCAGATGTCAAAAAATGCCAAAAGTTGCAAAGGCTTCACATTGCAGACAACTTATTTTCCTCTGCATTGCCCCGGGAAATTGGAAATCTCACTCAATTAGTCACTTTCAATATTTCTTCAAATCGGCTTGTTGGGAAGATTCCAATTGAGATTGTTAATTGTAAGATGCTACAACGACTTGATCTCAGCCACAATAGCTTTGTAGGTAGTTTACCGAGTGAGGTTGGATCCCTTTTGCAATTGGAGCTTCTTAGGCTTTCAGAAAACAATTTCTCAGGGAATATACCAAAGTCGCTTGGAAATCTCTCCCATTTGACAGAGTTGCAGATGGGCGGCAACTCATTCACTGGTGAAATACCGAGGGAATTGGGTTTCCTCTCGAGCCTGCAGATTGCTATGAATCTCAGTTTTAACAATCTGAGTGGAAGAATACCTTCAGAGATTGGTAATCTTAACTTACTGGAAGATCTTCTGCTCAATAACAATAACCTGAGCGGCAAAATTCCTAGTACATTTGACAACCTTTCCAGTTTACTGGTTTGTAACTTATCTTACAATGATCTGACTGGGCCTATACCTTCCATATCACTCTTTCAGAACATGGCCTGTAGTAGCTTCATCGGCAACAATGGACTTTGTGGTGGGACTCTTGGTGATTGTAATGGAGATTCATCTCCTGCCTTTGTTCCATCTTTGACAAACAAAGATGCTCCTCGAGGAAAAATTATTACCGGGATTGCTGCTGTCGTCGGAGGGGTCTCTCTCATATTAATTGTAGTTATTTTGTACTTCATGAGACGCCCTCCTGAGACAATTGCTACCACTTTGCTTGATAAGGAAATTCCTTTTACTGATTCCGATATCTATTTTCCTCCCAAGGAGGGATTTACTTTTCATGATCTAGTTGAGGCCACAAATAACTTTCACGATAGCTATGTTGTTGGAAAGGGTGCATGTGGAACAGTTTACAAGGCTGAGATGCATTCTGGACCGACCATAGCTGTGAAAAGGCTATCTTCTAACAGGGAAGGAAACAACATTGAGAACAGTTTTCGAGCTGAGATCTTAACGCTTGGAAATATTAGACATCGTAATATTGTTAAGCTTTATGGTTTTTGCTATCATCAAGGTTCAAATCTCCTCCTTTATGAGTATATGGAAAAGGGTAGTTTAGGTGAGCTACTTCATGGAGCCTCATGTAACTTAGAATGGCCTATTCGATTTACAATTGCCATTGGAGCTGCAGAGGGCCTAGCTTATTTACATCATGACTGCAAACCAAGGATTATTCACCGGGATATCAAGTCAAATAATATTCTCATTGACGATAATTTCGAGGCCCATGTTGGTGATTTTGGTTTGGCAAAAGTGATTGATATGCCACAATCCAAATCCATGTCAGCAGTTGCAGGATCGTATGGATACATTGCTCCTGAATATGCATACACTATGAAGGTTAATGAAAAAAGTGACATATACAGCTATGGAGTCGTTTTGTTGGAGTTACTAACGGGAAAAACTCCTGTTCAGCCACTAGATCAAGGAGGTAATCTTGTAATATGGGTAAGAAACTACATCCGCAACAATTCTATCTCCACTGGAATACTGGATGAGAGATTAGATCTACAAGACAAAACCATTGTCGATCACATGTTCACTGTACTAAAAATTGCATTGATGTGCACGAGCACAACGCCACTTGACCGGCCGTCCATGCGGGAAGTTGTGCTGATGCTGATGGAGTCCAATTCACGAGAAACCAACCTTAGTTCGTGCGATGATGTTCCTCTCAAAGAGGATGCGTCGTGA 3312 40.61 MSQDVMSRRTLELKVAGFLVLALLVCSSQCLNFEGLSLLELKNNLLDEFDSLGNWNSYDQTPCGWIGVNCTTDHEPVVWSINLSMMNLSGPLSPSIGNLVHLTYLNLAYNGFSGNISKEIGNCSGLEYLFLNNNMFDGEIPFELGRLSSLTSLNLCNNRISGPIPEDLGNLTSLVEFVAYTNEITGPLPHSIGNLKNLVTFRAGQNAISGSIPEEIGGCESLKLLGLAQNQIGGEIPKEVGFLKSLKELILWDNQLSGFIPEEIGECKSLETIALYKNNLVGPIPKQMGELASLKKLYIYRNGLNGTIPKEIGNLSHVTEIDFSENFLTGGIPMELSKINGLRLLHLFQNKFTGVIPNELSNLHNLTELDLSINYLEGPIPTGFQYLTKMIQLLLFDNSLSGGIPQELGLYGKLWVIDFSHNNLTGRIPDHLCHNSNLILLNLDFNKLNGNIPSGMLNCSSLMQLRLVGNRLSGSFPSELCNLMNLSAIELDQNEFSGLIPPDVKKCQKLQRLHIADNLFSSALPREIGNLTQLVTFNISSNRLVGKIPIEIVNCKMLQRLDLSHNSFVGSLPSEVGSLLQLELLRLSENNFSGNIPKSLGNLSHLTELQMGGNSFTGEIPRELGFLSSLQIAMNLSFNNLSGRIPSEIGNLNLLEDLLLNNNNLSGKIPSTFDNLSSLLVCNLSYNDLTGPIPSISLFQNMACSSFIGNNGLCGGTLGDCNGDSSPAFVPSLTNKDAPRGKIITGIAAVVGGVSLILIVVILYFMRRPPETIATTLLDKEIPFTDSDIYFPPKEGFTFHDLVEATNNFHDSYVVGKGACGTVYKAEMHSGPTIAVKRLSSNREGNNIENSFRAEILTLGNIRHRNIVKLYGFCYHQGSNLLLYEYMEKGSLGELLHGASCNLEWPIRFTIAIGAAEGLAYLHHDCKPRIIHRDIKSNNILIDDNFEAHVGDFGLAKVIDMPQSKSMSAVAGSYGYIAPEYAYTMKVNEKSDIYSYGVVLLELLTGKTPVQPLDQGGNLVIWVRNYIRNNSISTGILDERLDLQDKTIVDHMFTVLKIALMCTSTTPLDRPSMREVVLMLMESNSRETNLSSCDDVPLKEDAS 1103
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6504448 6508085 + Bda005403.1 Bda11g00657 15765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00657 1103 ProSitePatterns Serine/Threonine protein kinases active-site signature. 930 942 IPR008271 GO:0004672|GO:0006468
Bda11g00657 1103 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 5 1091 - -
Bda11g00657 1103 SMART serkin_6 809 1080 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g00657 1103 Gene3D Phosphorylase Kinase; domain 1 779 886 - -
Bda11g00657 1103 Gene3D Ribonuclease Inhibitor 388 728 IPR032675 -
Bda11g00657 1103 Gene3D Ribonuclease Inhibitor 183 284 IPR032675 -
Bda11g00657 1103 ProSiteProfiles Protein kinase domain profile. 809 1090 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g00657 1103 Pfam Leucine rich repeat N-terminal domain 33 70 IPR013210 -
Bda11g00657 1103 SUPERFAMILY RNI-like 345 695 - -
Bda11g00657 1103 Gene3D Transferase(Phosphotransferase) domain 1 887 1097 - -
Bda11g00657 1103 SMART LRR_typ_2 363 386 IPR003591 -
Bda11g00657 1103 SMART LRR_typ_2 603 627 IPR003591 -
Bda11g00657 1103 SMART LRR_typ_2 555 579 IPR003591 -
Bda11g00657 1103 SMART LRR_typ_2 99 123 IPR003591 -
Bda11g00657 1103 SMART LRR_typ_2 652 675 IPR003591 -
Bda11g00657 1103 SMART LRR_typ_2 147 171 IPR003591 -
Bda11g00657 1103 SMART LRR_typ_2 243 267 IPR003591 -
Bda11g00657 1103 SMART LRR_typ_2 291 315 IPR003591 -
Bda11g00657 1103 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 5 1091 - -
Bda11g00657 1103 SUPERFAMILY L domain-like 45 401 - -
Bda11g00657 1103 Gene3D Ribonuclease Inhibitor 285 387 IPR032675 -
Bda11g00657 1103 Gene3D Ribonuclease Inhibitor 31 182 IPR032675 -
Bda11g00657 1103 SUPERFAMILY Protein kinase-like (PK-like) 787 1080 IPR011009 -
Bda11g00657 1103 Pfam Protein kinase domain 810 1076 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00016 Bda-Chr5:1222436 Bda11g00657 Bda-Chr11:6504448 1.24E-64 dispersed
Bda07g01803 Bda-Chr7:34403343 Bda11g00657 Bda-Chr11:6504448 1.34E-81 dispersed
Bda07g01807 Bda-Chr7:34582929 Bda11g00657 Bda-Chr11:6504448 1.49E-49 dispersed
Bda08g00020 Bda-Chr8:186272 Bda11g00657 Bda-Chr11:6504448 1.15E-17 dispersed
Bda09g00445 Bda-Chr9:5862398 Bda11g00657 Bda-Chr11:6504448 0 dispersed
Bda11g00657 Bda-Chr11:6504448 Bda04g00148 Bda-Chr4:4062338 9.50E-24 dispersed
Bda11g00738 Bda-Chr11:7422449 Bda11g00657 Bda-Chr11:6504448 7.55E-17 transposed
Bda11g00657 Bda-Chr11:6504448 Bda03g01111 Bda-Chr3:11359984 0 wgd
Bda11g00657 Bda-Chr11:6504448 Bda05g00872 Bda-Chr5:57171543 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69898 PF00069 Pkinase 1.30E-46 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00657 - - rcu:8265655 1613.2