Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00680 ATGGTTTTCTCAATGTCCTTGGCTTTTCGTTTTTGGTTTCTCTTTCTTCACCTTCTTCCTCTTTGTTTCTCTCTCAACTCCGACGGTCTCGCCCTTCTCGCCCTCAAAGCCGCCATTGACACCGACCCAACTCGCATTCTTGACTCCTGGTCTGACTCCGACTTCACTCCTTGTCGCTGGGATGGAGTCGTTTGCACTCGAGACCGAGTTACCGAGCTCACTCTCCCCCGAAGGGGCTTCAATGGTTATGTTCCCTCCGAACTCGGTTTGCTCGACTCTCTCACGTCACTCACTTTGGCTAACAACAATTTCTCTAGTCTTATTCCCTCGCATTTATACAACGCCACAAATCTAGTCTCTCTCGATCTCTCTCATAACTCGCTTTCTGGCCCAATCTCCGACCAAATTAAAGACCTCAAAAGCCTCAAGCATTTGGATTTATCATCCAATTTACTCAACGGCTCTCTCCCAGAGGGTCTCGGGGAGCTCCCTCACCTCGTCGGAACTCTTAATTTGTCGTACAATCGTTTTTCAGGCGGAGTTCCCTCTTCGTACGGAAATCTTCCGGTGCTCGTGAATCTGGATCTCCGACACAACAATCTCACTGGGGAACTTCCTCAGGTTGGATCGCTGTTAAACCAAGGACCTACTTCTTTCTCCGGAAACCCCAGCCTTTGTGGATTTCCTCTGCAAACTCCATGTCCAGAGGCTCAAAATCCTAGGAGTTTTCCGAGCTCTGAAGAGCCACAAAATCCGAAAGAGAACAACCCTGCCTTTCCCGCCTTCAATGTCGACAGAATAAAAGAAAAACGAGTGGGATCGCTGACCGTGTCGGTAATCTCCGGCGTTTCAGTCATTCTCGGAATTGTTTCCGTCTCGGTCTGGTGGTTTCGGAGAAAAGGGAGGAGTGTCGCCGGGGAGGATGGTAAAATGGGAAAAAAGGAACCAGAGAGTGATGTTGAAGAAGAAGGGCAAAAAGGTAAATTCGTAATAGTCGATGAGGGGTTTAATTTGGAATTAGAAGATTTGTTGAGGGCGTCTGCGTACGTAATTGGTAAAAGCAGGAGTGGAATAGTTTACAAGGTGGTGGCCGGTCGAGGATCAGGTGCGGCGGCGACCGTCGTAGCCGTGAGGAGACTGAGCGAGGGAGGTTCGACGTGGAGGTTTAAGGAGTTTGAAAGTGAAGTGGAGGCCATTGGGAAAGGTCCAACACCCTAA 1218 49.43 MVFSMSLAFRFWFLFLHLLPLCFSLNSDGLALLALKAAIDTDPTRILDSWSDSDFTPCRWDGVVCTRDRVTELTLPRRGFNGYVPSELGLLDSLTSLTLANNNFSSLIPSHLYNATNLVSLDLSHNSLSGPISDQIKDLKSLKHLDLSSNLLNGSLPEGLGELPHLVGTLNLSYNRFSGGVPSSYGNLPVLVNLDLRHNNLTGELPQVGSLLNQGPTSFSGNPSLCGFPLQTPCPEAQNPRSFPSSEEPQNPKENNPAFPAFNVDRIKEKRVGSLTVSVISGVSVILGIVSVSVWWFRRKGRSVAGEDGKMGKKEPESDVEEEGQKGKFVIVDEGFNLELEDLLRASAYVIGKSRSGIVYKVVAGRGSGAAATVVAVRRLSEGGSTWRFKEFESEVEAIGKGPTP 405
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6817680 6818897 - Bda005427.1 Bda11g00680 15788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00680 405 SMART LRR_typ_2 139 163 IPR003591 -
Bda11g00680 405 SMART LRR_typ_2 91 115 IPR003591 -
Bda11g00680 405 SMART LRR_typ_2 188 211 IPR003591 -
Bda11g00680 405 Gene3D Ribonuclease Inhibitor 168 236 IPR032675 -
Bda11g00680 405 Gene3D Ribonuclease Inhibitor 25 167 IPR032675 -
Bda11g00680 405 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 7 401 - -
Bda11g00680 405 MobiDBLite consensus disorder prediction 235 257 - -
Bda11g00680 405 MobiDBLite consensus disorder prediction 231 260 - -
Bda11g00680 405 SUPERFAMILY L domain-like 23 231 - -
Bda11g00680 405 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 7 401 - -
Bda11g00680 405 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Bda11g00680 405 Pfam Leucine rich repeat 93 152 IPR001611 GO:0005515
Bda11g00680 405 PRINTS Leucine-rich repeat signature 139 152 - -
Bda11g00680 405 PRINTS Leucine-rich repeat signature 118 131 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g00680 Bda-Chr11:6817680 Bda11g00159 Bda-Chr11:2076684 1.37E-76 dispersed
Bda11g00680 Bda-Chr11:6817680 Bda06g00060 Bda-Chr6:618366 1.68E-09 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00680 - - cmax:111467172 461.455