Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00693 ATGAAAAAACTTCACTATCGTCACAGTACATGCTGTTTTCCTTTTCATGGTTTGTGTGAAAAAACAGGTGAGGCAGCCATTGGAGGAGTTAAGGAGGAGAAGAAGAAGATGGGCGCAGCTTTAGCCGATGGAAAGAACCGACAAGCTCTGGGAGATATCGGAAATCTTGTAACAGTTCGAGGAATGGACCCAAAGCCTAATCGTCCCATTACAAGAAGCTTCTGCGCCCAACTGCTCGCTAATGCTCAAGCTGCCGCAGCTGCTGAAAACAATAACAAGAAACAATTAGTGGTTGAGGCTAATGATGTGGTGGTGGCAGCGGGGAAAAAAGCAGGACTAGCTCCAAAGCCAACTCAGAAGAAACAACAAAAGCCAGTCACCGTGATCGAAATAAGCCCAGGTTCAGACTCGGAAGTGAATAATAAATCGGAGAGTAAAAAGGAAGGAGAAGAAGTCTCGTCCAAGAAGAAACAGAAGGCTACCCGTACTCTGACTTCAGTCCTCACAGCTAGAAGCAAGGCTGCTTGTGGTGTGACAAACAAACCCAAGGAAGAGAACTGTGATATAGATTCAGCTGATGCAGGAAACGAGCTAGCAGCAGTGGAATATATTGACGACATGTACAAGTTTTACAAGCTTGTTGAGCATGAAAGCAGGCCTCGTGATTATATGGATTCGCAGCCGGAGATCAATTCTCAAATGAGATCTATTCTGGTGGATTGGCTAGTTGATGTTCATAACAGATTTGAACTTTCCCCCGAGACATTCTACCTCGCAATCAACATCATCGACAGATATCTTGCGGCCAAGAAGGTGATGAGGAAAGAACTGCAGTTGGTTGGTGTAAGTGCAATGCTGATGGCCTCAAAATACGAAGAAATCTGGGCTCCTGAGGTCAATGACTTTGTCCGTCTTTCAGAGAGAGCTTACTCCCATGAACAGATCTTGAAAATGGAGAAACTAATTCTAGGAAAACTTGAATGGACGTTGACAGTTCCTACGCCTTATGTGTTTCTAGTTCGATTCATCAAGGCCTGTAAAGATGCCGATTCAGAAATGGAGAACATGGTTTATTTTCTAGCTGAACTGGGAATGATGCATTATTCAGCTGTGATAATGTTCAGCCCATCAATGATTGCTGCCTCAGCAGTCTACGTTGCTCGATGTACTCTGAACAAGAAATCTGCTTGGACTGAAACTCTGAAATATCATTCCGGTTTTTCGGAATCACAGCTCGCCGATTGTGCGAAATTGTTGGTGTGCTTCCATGCAATGGTGAGGGAGAGTCGACTGCAGGTTGTGAGGAAGAAGTACTCTGCTTCAGACAGAGGAGCTGTGGCTTTGCTTCCACCGGCCGAGAAATTGGTGTCTGCTAAGCTTGCTGCTGCAAGACCCACGACGACAAAATTGACACAATCATGTTGA 1425 45.05 MKKLHYRHSTCCFPFHGLCEKTGEAAIGGVKEEKKKMGAALADGKNRQALGDIGNLVTVRGMDPKPNRPITRSFCAQLLANAQAAAAAENNNKKQLVVEANDVVVAAGKKAGLAPKPTQKKQQKPVTVIEISPGSDSEVNNKSESKKEGEEVSSKKKQKATRTLTSVLTARSKAACGVTNKPKEENCDIDSADAGNELAAVEYIDDMYKFYKLVEHESRPRDYMDSQPEINSQMRSILVDWLVDVHNRFELSPETFYLAINIIDRYLAAKKVMRKELQLVGVSAMLMASKYEEIWAPEVNDFVRLSERAYSHEQILKMEKLILGKLEWTLTVPTPYVFLVRFIKACKDADSEMENMVYFLAELGMMHYSAVIMFSPSMIAASAVYVARCTLNKKSAWTETLKYHSGFSESQLADCAKLLVCFHAMVRESRLQVVRKKYSASDRGAVALLPPAEKLVSAKLAAARPTTTKLTQSC 474
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 6914682 6916595 + Bda005439.1 Bda11g00693 15801
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00693 474 SMART Cyclin_C_2 333 452 IPR004367 -
Bda11g00693 474 SMART cyclin_7 240 324 IPR013763 -
Bda11g00693 474 SMART cyclin_7 337 421 IPR013763 -
Bda11g00693 474 Gene3D - 220 331 - -
Bda11g00693 474 Pfam Cyclin, C-terminal domain 333 451 IPR004367 -
Bda11g00693 474 PANTHER G2/MITOTIC-SPECIFIC CYCLIN S13-6 33 460 - -
Bda11g00693 474 MobiDBLite consensus disorder prediction 120 139 - -
Bda11g00693 474 MobiDBLite consensus disorder prediction 113 160 - -
Bda11g00693 474 SUPERFAMILY Cyclin-like 332 453 IPR036915 -
Bda11g00693 474 CDD CYCLIN 331 420 IPR013763 -
Bda11g00693 474 PIRSF Cyclin_A_B_D_E 19 464 IPR039361 -
Bda11g00693 474 Coils Coil 79 99 - -
Bda11g00693 474 Gene3D - 206 447 - -
Bda11g00693 474 SUPERFAMILY Cyclin-like 196 330 IPR036915 -
Bda11g00693 474 Pfam Cyclin, N-terminal domain 206 330 IPR006671 -
Bda11g00693 474 ProSitePatterns Cyclins signature. 235 266 IPR006671 -
Bda11g00693 474 PANTHER CYCLINS 33 460 IPR039361 -
Bda11g00693 474 CDD CYCLIN 234 323 IPR013763 -
Bda11g00693 474 MobiDBLite consensus disorder prediction 140 158 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g00693 Bda-Chr11:6914682 Bda01g01446 Bda-Chr1:50385131 9.10E-52 dispersed
Bda13g01473 Bda-Chr13:37627034 Bda11g00693 Bda-Chr11:6914682 6.57E-33 dispersed
Bda01g01560 Bda-Chr1:51495590 Bda11g00693 Bda-Chr11:6914682 3.79E-86 transposed
Bda09g01217 Bda-Chr9:43549964 Bda11g00693 Bda-Chr11:6914682 5.67E-06 transposed
Bda11g00971 Bda-Chr11:9465763 Bda11g00693 Bda-Chr11:6914682 5.73E-80 transposed
Bda11g01814 Bda-Chr11:53300178 Bda11g00693 Bda-Chr11:6914682 2.55E-77 transposed
Bda11g00693 Bda-Chr11:6914682 Bda03g00583 Bda-Chr3:4846927 1.44E-157 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00693 K21777 - csv:101217210 525.398