Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda11g00693 | ATGAAAAAACTTCACTATCGTCACAGTACATGCTGTTTTCCTTTTCATGGTTTGTGTGAAAAAACAGGTGAGGCAGCCATTGGAGGAGTTAAGGAGGAGAAGAAGAAGATGGGCGCAGCTTTAGCCGATGGAAAGAACCGACAAGCTCTGGGAGATATCGGAAATCTTGTAACAGTTCGAGGAATGGACCCAAAGCCTAATCGTCCCATTACAAGAAGCTTCTGCGCCCAACTGCTCGCTAATGCTCAAGCTGCCGCAGCTGCTGAAAACAATAACAAGAAACAATTAGTGGTTGAGGCTAATGATGTGGTGGTGGCAGCGGGGAAAAAAGCAGGACTAGCTCCAAAGCCAACTCAGAAGAAACAACAAAAGCCAGTCACCGTGATCGAAATAAGCCCAGGTTCAGACTCGGAAGTGAATAATAAATCGGAGAGTAAAAAGGAAGGAGAAGAAGTCTCGTCCAAGAAGAAACAGAAGGCTACCCGTACTCTGACTTCAGTCCTCACAGCTAGAAGCAAGGCTGCTTGTGGTGTGACAAACAAACCCAAGGAAGAGAACTGTGATATAGATTCAGCTGATGCAGGAAACGAGCTAGCAGCAGTGGAATATATTGACGACATGTACAAGTTTTACAAGCTTGTTGAGCATGAAAGCAGGCCTCGTGATTATATGGATTCGCAGCCGGAGATCAATTCTCAAATGAGATCTATTCTGGTGGATTGGCTAGTTGATGTTCATAACAGATTTGAACTTTCCCCCGAGACATTCTACCTCGCAATCAACATCATCGACAGATATCTTGCGGCCAAGAAGGTGATGAGGAAAGAACTGCAGTTGGTTGGTGTAAGTGCAATGCTGATGGCCTCAAAATACGAAGAAATCTGGGCTCCTGAGGTCAATGACTTTGTCCGTCTTTCAGAGAGAGCTTACTCCCATGAACAGATCTTGAAAATGGAGAAACTAATTCTAGGAAAACTTGAATGGACGTTGACAGTTCCTACGCCTTATGTGTTTCTAGTTCGATTCATCAAGGCCTGTAAAGATGCCGATTCAGAAATGGAGAACATGGTTTATTTTCTAGCTGAACTGGGAATGATGCATTATTCAGCTGTGATAATGTTCAGCCCATCAATGATTGCTGCCTCAGCAGTCTACGTTGCTCGATGTACTCTGAACAAGAAATCTGCTTGGACTGAAACTCTGAAATATCATTCCGGTTTTTCGGAATCACAGCTCGCCGATTGTGCGAAATTGTTGGTGTGCTTCCATGCAATGGTGAGGGAGAGTCGACTGCAGGTTGTGAGGAAGAAGTACTCTGCTTCAGACAGAGGAGCTGTGGCTTTGCTTCCACCGGCCGAGAAATTGGTGTCTGCTAAGCTTGCTGCTGCAAGACCCACGACGACAAAATTGACACAATCATGTTGA | 1425 | 45.05 | MKKLHYRHSTCCFPFHGLCEKTGEAAIGGVKEEKKKMGAALADGKNRQALGDIGNLVTVRGMDPKPNRPITRSFCAQLLANAQAAAAAENNNKKQLVVEANDVVVAAGKKAGLAPKPTQKKQQKPVTVIEISPGSDSEVNNKSESKKEGEEVSSKKKQKATRTLTSVLTARSKAACGVTNKPKEENCDIDSADAGNELAAVEYIDDMYKFYKLVEHESRPRDYMDSQPEINSQMRSILVDWLVDVHNRFELSPETFYLAINIIDRYLAAKKVMRKELQLVGVSAMLMASKYEEIWAPEVNDFVRLSERAYSHEQILKMEKLILGKLEWTLTVPTPYVFLVRFIKACKDADSEMENMVYFLAELGMMHYSAVIMFSPSMIAASAVYVARCTLNKKSAWTETLKYHSGFSESQLADCAKLLVCFHAMVRESRLQVVRKKYSASDRGAVALLPPAEKLVSAKLAAARPTTTKLTQSC | 474 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 6914682 | 6916595 | + | Bda005439.1 | Bda11g00693 | 15801 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda11g00693 | 474 | SMART | Cyclin_C_2 | 333 | 452 | IPR004367 | - | |
| Bda11g00693 | 474 | SMART | cyclin_7 | 240 | 324 | IPR013763 | - | |
| Bda11g00693 | 474 | SMART | cyclin_7 | 337 | 421 | IPR013763 | - | |
| Bda11g00693 | 474 | Gene3D | - | 220 | 331 | - | - | |
| Bda11g00693 | 474 | Pfam | Cyclin, C-terminal domain | 333 | 451 | IPR004367 | - | |
| Bda11g00693 | 474 | PANTHER | G2/MITOTIC-SPECIFIC CYCLIN S13-6 | 33 | 460 | - | - | |
| Bda11g00693 | 474 | MobiDBLite | consensus disorder prediction | 120 | 139 | - | - | |
| Bda11g00693 | 474 | MobiDBLite | consensus disorder prediction | 113 | 160 | - | - | |
| Bda11g00693 | 474 | SUPERFAMILY | Cyclin-like | 332 | 453 | IPR036915 | - | |
| Bda11g00693 | 474 | CDD | CYCLIN | 331 | 420 | IPR013763 | - | |
| Bda11g00693 | 474 | PIRSF | Cyclin_A_B_D_E | 19 | 464 | IPR039361 | - | |
| Bda11g00693 | 474 | Coils | Coil | 79 | 99 | - | - | |
| Bda11g00693 | 474 | Gene3D | - | 206 | 447 | - | - | |
| Bda11g00693 | 474 | SUPERFAMILY | Cyclin-like | 196 | 330 | IPR036915 | - | |
| Bda11g00693 | 474 | Pfam | Cyclin, N-terminal domain | 206 | 330 | IPR006671 | - | |
| Bda11g00693 | 474 | ProSitePatterns | Cyclins signature. | 235 | 266 | IPR006671 | - | |
| Bda11g00693 | 474 | PANTHER | CYCLINS | 33 | 460 | IPR039361 | - | |
| Bda11g00693 | 474 | CDD | CYCLIN | 234 | 323 | IPR013763 | - | |
| Bda11g00693 | 474 | MobiDBLite | consensus disorder prediction | 140 | 158 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda11g00693 | Bda-Chr11:6914682 | Bda01g01446 | Bda-Chr1:50385131 | 9.10E-52 | dispersed | |
| Bda13g01473 | Bda-Chr13:37627034 | Bda11g00693 | Bda-Chr11:6914682 | 6.57E-33 | dispersed | |
| Bda01g01560 | Bda-Chr1:51495590 | Bda11g00693 | Bda-Chr11:6914682 | 3.79E-86 | transposed | |
| Bda09g01217 | Bda-Chr9:43549964 | Bda11g00693 | Bda-Chr11:6914682 | 5.67E-06 | transposed | |
| Bda11g00971 | Bda-Chr11:9465763 | Bda11g00693 | Bda-Chr11:6914682 | 5.73E-80 | transposed | |
| Bda11g01814 | Bda-Chr11:53300178 | Bda11g00693 | Bda-Chr11:6914682 | 2.55E-77 | transposed | |
| Bda11g00693 | Bda-Chr11:6914682 | Bda03g00583 | Bda-Chr3:4846927 | 1.44E-157 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda11g00693 | K21777 | - | csv:101217210 | 525.398 |