Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00695 ATGAGGGAGGACGACTCTAATTGGTTCTCTAGGTGGGAGGAGGAGCTCCCATCTCCTGACGAATTAATGCCTTTATCCCAAACCCTAATCACCCCTGATCTCGCTCTCGCTTTTGAAATCCGAAGTCCATCCAATACTTGCCCCCAGCAAGGCCCTCCGCCTCCAACTCTGTCCAATCATTTAGCTTCCTCAGCTGCTGCTGGCTGCGGTGGAGCCGCTACTCAACCCAACTCCTCCGAGTTTGCAGATTCCGCCGATTTGGGTTCTGGAGCTGCTGGCGATGAACCGGCAAGGACCCTCAAGCGGCCGCGGCTTGTTTGGACGCCCCAGCTCCACAAGCGGTTCGTAGATGCGGTGGCGCATTTGGGGATCAAGAATGCTGTCCCAAAGACTATAATGCAGCTGATGAGTGTGGATGGGTTGACTAGAGAGAACGTGGCCAGCCATTTACAGAAGTACCGCCTTTATTTGAAACGAATGCAGGGATTATCAAGCGGAAGCGCTGGAGGAGCTGCCGTAGGAGTGGCCGGAGGAGTTGATCCTGCTACCGATCATTTGTTTGCCAGCTCTCCAGTTCCGCCGCATTTCTTGCACCCACACCCAGGCCGCCCCAGTTCCGACCATTTCTTGCCTTTTGTCCCAGTTGCAGCTTTGCAGCAGCACCACCATCACCACCAGCAGATTGCGGCAGCAGCTGCCCATCCTCAGCTGCAGCCTCCGTATCACAGACAGGTCGGCCATTTTGGGTCACCTCCGAATGGGCAATACGAGCATCCGTTTTTAGCGAGGCAGACTCAGCCAGTTCACAGGGTGGGTGCACAATTGCACAATTCGATGCTGAATCACGTCGAGGACTTGGAATCTGCTAACGCCACTGGAGGGAGGAAGGTTCTTACTCTGTTTCCAACTGGGGATGACTAA 921 54.83 MREDDSNWFSRWEEELPSPDELMPLSQTLITPDLALAFEIRSPSNTCPQQGPPPPTLSNHLASSAAAGCGGAATQPNSSEFADSADLGSGAAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSSGSAGGAAVGVAGGVDPATDHLFASSPVPPHFLHPHPGRPSSDHFLPFVPVAALQQHHHHHQQIAAAAAHPQLQPPYHRQVGHFGSPPNGQYEHPFLARQTQPVHRVGAQLHNSMLNHVEDLESANATGGRKVLTLFPTGDD 306
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6921384 6922304 + Bda005441.1 Bda11g00695 15803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00695 306 Gene3D - 99 161 - -
Bda11g00695 306 SUPERFAMILY Homeodomain-like 99 159 IPR009057 -
Bda11g00695 306 Pfam Myb-like DNA-binding domain 106 154 IPR001005 -
Bda11g00695 306 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 107 158 IPR017930 -
Bda11g00695 306 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 306 IPR044841 GO:0003700|GO:0006355
Bda11g00695 306 MobiDBLite consensus disorder prediction 43 96 - -
Bda11g00695 306 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 103 155 IPR006447 GO:0003677
Bda11g00695 306 PANTHER HOMEODOMAIN-LIKE PROTEIN-RELATED 1 306 - -
Bda11g00695 306 MobiDBLite consensus disorder prediction 70 84 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g00695 Bda-Chr11:6921384 Bda11g00187 Bda-Chr11:2406265 5.68E-24 dispersed
Bda09g01515 Bda-Chr9:46870769 Bda11g00695 Bda-Chr11:6921384 1.27E-40 transposed
Bda11g00695 Bda-Chr11:6921384 Bda03g01158 Bda-Chr3:12761839 4.26E-24 wgd
Bda11g00695 Bda-Chr11:6921384 Bda03g00582 Bda-Chr3:4845047 1.91E-165 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16617 PF00249 Myb_DNA-binding 2.30E-08 CL0123 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00695 - - csv:101216969 435.647