Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00726 ATGTTGTGGGTTGACAAGTACCGTCCCAAAACCCTAGACCAGATCGTGGTCCACCAAGACGTCGCTCAGAACCTCAAGAAATTGGTCGCGGAGCAGGACTGCCCACATTTACTCTTCTATGGACCTCCCGGCTCAGGAAAGAAAACCCTAATCATGGCCTTAATTCGACAGATGTTCGGACCTAGTGCGGAGAAGGTGAAGGTGGAGAATAAAACATGGAAAGTGGATGCTGGAAGTCGAAGTATTGATATAGAGTTGACAACATTATCTAGTGCAAACCATGTGGAATTAAATCCCAGTGATGCAGGTTTTCAAGACAGGTACATTGTTCAAGAGATAATAAAGGAAATGGCAAAGAATAGACCAATTGACACAAAGGGAAGAAAAGGATATAAAGTGTTGGTTCTCAATGAAGTTGACAAACTCTCAAGAGAAGCGCAGCATTCTCTACGCAGAACAATGGAGAAGTATAGTTCTTATTGCAGGTTAATACTTTGCTGTAATAGTTCGTCAAGAGTGACGGAAGCCATTAGGTCGCGATGTCTTAATGTTCGGATTAATGCACCGACAGAAGAACAGCAGATTGTTAAGGTGTTAGAGTTGGTGGGGAAGAAAGAAGGACTGCAGATTCCATCTGGATTTGCTGCTCGTATTGCAGAAAAATCAAATCGGAGTTTAAGGAGGGCTATATTGTCTTTAGAGACTTGTCGCGTTCAACAGTATCCTTTTAGTAGCAGTCAAGTCATACCACCAATGGATTGGGAGGAATATGTGGCCGAGATATCATCTGACATAATGAAGGAGCAGAGCCCTAAGAGATTGTTTGAGGTTCGAGGAAAGTTGTATGAGCTTCTTGTGAACTGTATTCCTGCAGAGATTATCTTAAAGAGATTACTATACGAACTACTCAAAAAATTGGATGCCGAATTAAAGCATGAGATCTGCCATTGGGCTGCGTATTATGAACATAGGATGCGCCTTGGACAAAAAGCCATCTTTCACCTTGAAGCATTTGTGGCCAAATTCATGAGTATATACAAGACGTTCCTCGTATCAACTTTTGGGTGA 1068 42.23 MLWVDKYRPKTLDQIVVHQDVAQNLKKLVAEQDCPHLLFYGPPGSGKKTLIMALIRQMFGPSAEKVKVENKTWKVDAGSRSIDIELTTLSSANHVELNPSDAGFQDRYIVQEIIKEMAKNRPIDTKGRKGYKVLVLNEVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSRCLNVRINAPTEEQQIVKVLELVGKKEGLQIPSGFAARIAEKSNRSLRRAILSLETCRVQQYPFSSSQVIPPMDWEEYVAEISSDIMKEQSPKRLFEVRGKLYELLVNCIPAEIILKRLLYELLKKLDAELKHEICHWAAYYEHRMRLGQKAIFHLEAFVAKFMSIYKTFLVSTFG 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7244315 7251456 - Bda005475.1 Bda11g00726 15834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00726 355 Gene3D - 1 189 IPR027417 -
Bda11g00726 355 SMART AAA_5 33 192 IPR003593 -
Bda11g00726 355 Pfam DNA polymerase III, delta subunit 18 188 - -
Bda11g00726 355 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 2 347 - -
Bda11g00726 355 SUPERFAMILY post-AAA+ oligomerization domain-like 252 347 IPR008921 GO:0003677|GO:0006260
Bda11g00726 355 CDD AAA 16 189 - -
Bda11g00726 355 PANTHER REPLICATION FACTOR C SUBUNIT 3 2 347 - -
Bda11g00726 355 Gene3D - 191 251 - -
Bda11g00726 355 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 242 IPR027417 -
Bda11g00726 355 Gene3D - 253 346 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda11g00726 Bda13g01478 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda10g00139 Bda-Chr10:3995373 Bda11g00726 Bda-Chr11:7244315 1.23E-47 dispersed
Bda11g00726 Bda-Chr11:7244315 Bda13g01478 Bda-Chr13:37675193 4.60E-36 dispersed
Bda11g00726 Bda-Chr11:7244315 Bda11g00296 Bda-Chr11:3354230 8.43E-49 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00726 K10756 - jre:109000861 634.409