Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00744 ATGAAAAAACTCCTGATGTCCAGTTCGTCGTCGAGAACTGGAAATCCATTTGCAAACCCGGCTCTCGCGTTTGCCATGGTGATTTGCTTTACCGTCTTCTCGCTTTTCTTCTTCTCTTTCTTCTTTTATATGAAGAAGGCAGAGATACCTACTTCAGAGCATCTATTGCTGGCTCTGGTTTTCATTGCTGTTGCTCTTTTCTTCATAAGCAAGAACAAGGCTCTAATCAATCAAGCGCTTTCGATCATTAAACACGCATGGGAGGAAAATGCGAAACGGTTCGGAATTTCAAAGAGCAATGCTAAGCCGGTGCAGTGGTTCATCGGGGATTCGAACGCCAACAGAATCTCGCAGAAGCGAAAGGAAATAATTAGAGAAGGCGTTGAGTTCTACAGTAATGGCGATTTCTACGAAGGCGAATTTCACGATGGGCGCTGTAATGGAAGTGGTGTTTACAATTACTTCGTGAACGGGAGATATGAAGGGGACTGGATAGATGGGAGGTATGACGGGTATGGAATCGAAAGCTGGGCAAGAGGAAGTCGGTATCGGGGCCAGTATCGGCAAGGGCTGAGACATGGAATTGGAGCCTATCGTTTCTACACTGGTGATTCTTACGCAGGGGAATGGTATAATGGACAGAGCCACGGTGTTGGTGTTCAGACTTGCTCCGATTGTAGCTCCTTTGCCGGCGAATTCAAGTTTGGTAGCAAACACGGCCTTGGATGTTACTATTTCAGAAATGGGGATAGATATGCGGGCGAGTATTTCGGAGATAAAATCCATGGTTTTGGTGTCTACCAATTTGCCAATGGACATTGTTACGAGGGGTCGTGGCATGAAGGACGAAGGCAAGGCTACGGCTCGTACACGTTCCGAAACGGTGAAATAAAAAGTGGCGAATGGGATGGTGGCAGCCTCAATCACCCTCTTCCGCCTTTAAACGCCGCGGTTATAAGAGCAGTTCAGGCTGCTCGGAAAACGGCCGAGAATTCCATTAATCTTCAGAGAGTGGACGATCAGGTAAACAAGGCAATCACAGCAGCAAATCGAGCGGCCACTGCAGCCAGAGTCGCCGCTATCAAAGCCGTCCAAAATCAAATGGACGTGAAATTTTGTGAGGCAGATGTCTAG 1134 47.44 MKKLLMSSSSSRTGNPFANPALAFAMVICFTVFSLFFFSFFFYMKKAEIPTSEHLLLALVFIAVALFFISKNKALINQALSIIKHAWEENAKRFGISKSNAKPVQWFIGDSNANRISQKRKEIIREGVEFYSNGDFYEGEFHDGRCNGSGVYNYFVNGRYEGDWIDGRYDGYGIESWARGSRYRGQYRQGLRHGIGAYRFYTGDSYAGEWYNGQSHGVGVQTCSDCSSFAGEFKFGSKHGLGCYYFRNGDRYAGEYFGDKIHGFGVYQFANGHCYEGSWHEGRRQGYGSYTFRNGEIKSGEWDGGSLNHPLPPLNAAVIRAVQAARKTAENSINLQRVDDQVNKAITAANRAATAARVAAIKAVQNQMDVKFCEADV 377
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7471724 7473427 - Bda005491.1 Bda11g00744 15852

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00744 377 Pfam MORN repeat 229 251 IPR003409 -
Bda11g00744 377 Pfam MORN repeat 206 225 IPR003409 -
Bda11g00744 377 Pfam MORN repeat 160 182 IPR003409 -
Bda11g00744 377 Pfam MORN repeat 137 154 IPR003409 -
Bda11g00744 377 Pfam MORN repeat 183 204 IPR003409 -
Bda11g00744 377 Pfam MORN repeat 275 295 IPR003409 -
Bda11g00744 377 Pfam MORN repeat 252 273 IPR003409 -
Bda11g00744 377 PANTHER RADIAL SPOKE HEAD 10 HOMOLOG B-LIKE 37 371 - -
Bda11g00744 377 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 131 225 - -
Bda11g00744 377 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 202 305 - -
Bda11g00744 377 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 37 371 - -
Bda11g00744 377 SMART morn 250 271 IPR003409 -
Bda11g00744 377 SMART morn 227 248 IPR003409 -
Bda11g00744 377 SMART morn 204 225 IPR003409 -
Bda11g00744 377 SMART morn 181 202 IPR003409 -
Bda11g00744 377 SMART morn 135 157 IPR003409 -
Bda11g00744 377 SMART morn 273 294 IPR003409 -
Bda11g00744 377 SMART morn 158 179 IPR003409 -
Bda11g00744 377 Gene3D - 258 318 - -
Bda11g00744 377 Gene3D - 212 257 - -
Bda11g00744 377 Gene3D - 162 211 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00744 - - - jre:108988356 560.066
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bda03g00530 Bda11g00744 CCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01145 Bda-Chr3:12319410 Bda11g00744 Bda-Chr11:7471724 1.67E-110 dispersed
Bda08g00046 Bda-Chr8:347422 Bda11g00744 Bda-Chr11:7471724 3.11E-105 dispersed
Bda11g00744 Bda-Chr11:7471724 Bda14g00446 Bda-Chr14:3204669 6.73E-09 dispersed
Bda03g00530 Bda-Chr3:4420530 Bda11g00744 Bda-Chr11:7471724 1.93E-34 transposed
Bda01g01409 Bda-Chr1:50007767 Bda11g00744 Bda-Chr11:7471724 6.65E-14 wgd
Bda11g00744 Bda-Chr11:7471724 Bda03g00521 Bda-Chr3:4365376 1.94E-15 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g292 . Blo12g00674 . Bda03g00530 Bpe02g00076 Bpe04g00484 . . Cmo04g02460 Cmo15g00707 . Cma09g00805 . . . Cpe06g00640 . . . . . . . . Cla08g00565 Cam08g0982 Cec08g0571 Cco08g0681 Clacu08g0690 . Cre08g0504 Cone4ag1389 Cone7ag1546 Cone17ag1274 Cone20ag0452 Lsi04g02379 Csa04g01814 . . . . Bda11g00744 . . . . . . . Cmo09g00798 . . Car04g02278 Car09g00721 Cpe01g02040 . Bhi09g02656 . . . Hepe01g2270 Mch11g0819 . Cla11g01525 Cam11g1585 Cec11g1614 Cco11g1615 Clacu11g1742 Cmu11g1560 Cre11g1976 Lsi08g00414 . Chy07g00660 Cme07g00868
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001672 2 2 3 1 2 1 4 2 1 2 2 2 3 2 2 4 2 4 4 2 2 2 2 2 2 2 2 4 2 1 68
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda11g00744 Bda_Chr11 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0