Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda11g00746 | ATGCTTCATTTACCGCAATTTCTATCTCCTAGGAAGCAGAATCGAGACATGGATCTGAGGAGGAACGGAAGACGCCCGAGGCTAAAGCGTAGTAATGCTAGGAAGTACATTGAGTACGATGCAGAGTCGTCGTCTTCGCTGGACAACTCATGGGGGTCTGCTTATCCTGGGTCGCTTGACGTATCACAGCAAACGAGCTTTCGTATTGAGGGAACTGGCGACGATTTTGAAGGATTATTTAAAAAATTGGGGCTATCGGGCCCGGAAGACACTGGTATTCCGGTGGCGGCTTGGGAGGCCAGGAAGGCTCAGTCTTGTTCGGATCGTCTAACGCTTCCGAAGATGCATCTACTGGACGAGAGCCCAAAGGGAGATGATGAAATCGACGAGGAGGAAAGAGAAGTAGAAGTGAAATTCTGTAAGAGAGATGTTAATTCCGTTAGAACTAGGAATTCTAATGTTGCTCAGAATAAACCTTCCGAGTTAATTAATAGTGGCGGTGGAGGGGAAAGAGGGGGGATTAAGGGTATCCGTCCGCCGGGGCTTAAGCCGCCGCCCAGTAGACGCCTCCCTCTGATTGACAATACGTGCTCCACCTGGGATATTATGATGAGTTTAGCTCCACAAGAGGAAGGGCATAACGTTTTTTCTTCCGAAGATGTTGATGACGGAGAAAATGTTGGTCGTCCCGCTGCCAAGGTAGACATCGGAAGGAATATGGTCAGTTTGCGAGAAAGCGTTGCTCTTTTGGAGTCACTTTCTTGTTCCTTCACTACGTCAAACGACGATGATTCTTCGAGCTGCACAACGGAGCCATCCAACATTTCTCCCGACGAGAGAGGTAGGCGCACTATAACGAACTGGGAAAAGGGTCATCTTCTTGGGAGAGGCTCGTTTGGATCTGTATACGAAGGAATATCTGATGATGGATTCTTTTTTGCTGTTAAAGAAGTTTCATTGCTCGATCAAGACAATCAGGGCAGGCGCCGTGTTTATCAACTTGAGCAGGAGATCGCCCTTCTAAGTCAGTTTGAGCACGAGAACATAGTTCGATATTATGGCACGGATAAGGATGAATCAAAACTCTACATCTTTCTCGAGCTTGTAAGTCAAGGCTCCCTTATGAATCTCTACCGGACTTATAATCTTCGAGATTCCCAAGTCTCTGTGTATACAAGACAGATTTTGAATGGCTTGAAATATCTTCATGACCGGCATGTAATTCACAGGGATATCAAGTGTGCGAATATTTTGGTGGATGCAAATGGGTTAGTGAAGCTTGCAGATTTTGGACTGGCAAAGGCAACAAAACTGAATGATGTGAAATCCTGTCAGGGAACTCCATTCTGGATGGCACCCGAGGTTGTTAAAGGCGCCAACCGGGGGTATGGTCTTCCTGCCGATATCTGGAGTCTTGGATGTACTATCTTAGAGATGCTCACCCGTCAGATTCCATACTCCGAATTCGAAAGTATGCAGGCTTTATACAGGATTGGAAAGGGCATTCCTCCTACTATTCCGGACACTCTCTCAAACGATGCCCAAGATTTTATCCTGCAGTGCCTACAAGTTAGTCCAGACTGA | 1584 | 46.72 | MLHLPQFLSPRKQNRDMDLRRNGRRPRLKRSNARKYIEYDAESSSSLDNSWGSAYPGSLDVSQQTSFRIEGTGDDFEGLFKKLGLSGPEDTGIPVAAWEARKAQSCSDRLTLPKMHLLDESPKGDDEIDEEEREVEVKFCKRDVNSVRTRNSNVAQNKPSELINSGGGGERGGIKGIRPPGLKPPPSRRLPLIDNTCSTWDIMMSLAPQEEGHNVFSSEDVDDGENVGRPAAKVDIGRNMVSLRESVALLESLSCSFTTSNDDDSSSCTTEPSNISPDERGRRTITNWEKGHLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQDNQGRRRVYQLEQEIALLSQFEHENIVRYYGTDKDESKLYIFLELVSQGSLMNLYRTYNLRDSQVSVYTRQILNGLKYLHDRHVIHRDIKCANILVDANGLVKLADFGLAKATKLNDVKSCQGTPFWMAPEVVKGANRGYGLPADIWSLGCTILEMLTRQIPYSEFESMQALYRIGKGIPPTIPDTLSNDAQDFILQCLQVSPD | 527 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 7499350 | 7503304 | - | Bda005493.1 | Bda11g00746 | 15854 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda11g00746 | 527 | MobiDBLite | consensus disorder prediction | 259 | 281 | - | - | |
Bda11g00746 | 527 | MobiDBLite | consensus disorder prediction | 151 | 190 | - | - | |
Bda11g00746 | 527 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
Bda11g00746 | 527 | SMART | serkin_6 | 288 | 527 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda11g00746 | 527 | SUPERFAMILY | Protein kinase-like (PK-like) | 285 | 527 | IPR011009 | - | |
Bda11g00746 | 527 | PANTHER | MAP KINASE KINASE KINASE SSK2-RELATED-RELATED | 24 | 123 | - | - | |
Bda11g00746 | 527 | PANTHER | MAP KINASE KINASE KINASE SSK2-RELATED-RELATED | 127 | 527 | - | - | |
Bda11g00746 | 527 | Gene3D | Transferase(Phosphotransferase) domain 1 | 285 | 527 | - | - | |
Bda11g00746 | 527 | ProSiteProfiles | Protein kinase domain profile. | 288 | 527 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda11g00746 | 527 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 407 | 419 | IPR008271 | GO:0004672|GO:0006468 | |
Bda11g00746 | 527 | ProSitePatterns | Protein kinases ATP-binding region signature. | 294 | 316 | IPR017441 | GO:0005524 | |
Bda11g00746 | 527 | PANTHER | SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED | 24 | 123 | - | - | |
Bda11g00746 | 527 | MobiDBLite | consensus disorder prediction | 259 | 275 | - | - | |
Bda11g00746 | 527 | PANTHER | SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED | 127 | 527 | - | - | |
Bda11g00746 | 527 | Pfam | Protein kinase domain | 289 | 526 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda01g01408 | Bda11g00746 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda08g00257 | Bda-Chr8:2636862 | Bda11g00746 | Bda-Chr11:7499350 | 5.18E-26 | dispersed | |
Bda11g00746 | Bda-Chr11:7499350 | Bda15g00458 | Bda-Chr15:7682873 | 1.51E-128 | dispersed | |
Bda01g01408 | Bda-Chr1:49972122 | Bda11g00746 | Bda-Chr11:7499350 | 0 | wgd | |
Bda11g00746 | Bda-Chr11:7499350 | Bda03g00518 | Bda-Chr3:4354665 | 7.40E-30 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69903 | PF00069 | Pkinase | 2.90E-61 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda11g00746 | K13414 | - | pop:7460930 | 603.594 |