Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00775 CGTTTACCTGCAATGGCGGTTACGATTTCAGCGCGGGAAGAGAATGTTTACTTGGCTAAGCTCGCTGAGCAAGCTAAGCGCTACGAAGAGATGGTGGAGTTTATGGAGAAGGTCTCCACTGCCGTTGAGGGCGACGATCTCACTCTCGAGGAGCGAAATCTCCTCCTCTCCGTTGCTTACAAAAACGTGATCGGGGCTCGAAGGGCATCGTGGCGTATTATCTCATCCATCGAGCAGAACGAAGAGAGTCGGGGTAATGATGACCGTGTCCTCTCCATCATACGCGAATATAAATCCAAGATTGAGAGCGAACTGTCGAACATCTGCAGTGGGGTCCTCAAGCTCCTGGACATTGTGCAGCATGCGTCCATGCCTTTGACGGTTTTTTGTTTAAATATTAGACGGTTCTCTCAATTGATATTAGTTTGTTCATCACTTTCGAACAATGTATTATCCTTCAACGTAGTTGATCATGTGCAGGATATTTCTACCTCAGAAATAGCTCCAACTCATCCTATCCGACTTGGACTGGCTCTGAATTTCTCTGTCTTTTACTATGAGATTCTAAATTCTCCCGATCGTGCTTGCAGTCTTGCAAAACAGGCTTTTGATGAAGCAGTTGCTGAATTGGACACACTTGGTGTGAAGTATTACAAGGATAGCACTCAAATCATGCAGCTTCTTCGCGATAATCTCACTATATGGACTTCTGATTATGCAGGTGTGAAAGTGTAA 735 45.31 RLPAMAVTISAREENVYLAKLAEQAKRYEEMVEFMEKVSTAVEGDDLTLEERNLLLSVAYKNVIGARRASWRIISSIEQNEESRGNDDRVLSIIREYKSKIESELSNICSGVLKLLDIVQHASMPLTVFCLNIRRFSQLILVCSSLSNNVLSFNVVDHVQDISTSEIAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAVAELDTLGVKYYKDSTQIMQLLRDNLTIWTSDYAGVKV 244
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7779739 7780858 + Bda005524.1 Bda11g00775 15883

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00775 244 PANTHER 14-3-3 PROTEIN 8 241 IPR000308 -
Bda11g00775 244 SUPERFAMILY 14-3-3 protein 10 238 IPR036815 -
Bda11g00775 244 PANTHER 14-3-3-LIKE PROTEIN GF14 CHI-RELATED 8 241 - -
Bda11g00775 244 Gene3D - 3 243 IPR036815 -
Bda11g00775 244 SMART 1433_4 12 244 IPR023410 -
Bda11g00775 244 Pfam 14-3-3 protein 160 236 IPR023410 -
Bda11g00775 244 Pfam 14-3-3 protein 18 118 IPR023410 -
Bda11g00775 244 Coils Coil 18 38 - -
Bda11g00775 244 PRINTS 14-3-3 protein zeta signature 47 76 IPR000308 -
Bda11g00775 244 PRINTS 14-3-3 protein zeta signature 182 208 IPR000308 -
Bda11g00775 244 PRINTS 14-3-3 protein zeta signature 209 238 IPR000308 -
Bda11g00775 244 PRINTS 14-3-3 protein zeta signature 155 181 IPR000308 -
Bda11g00775 244 PIRSF 2014/3/3 6 243 IPR000308 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00775 K06630 YWHAE; 14-3-3 protein epsilon - qsu:112026333 305.834
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g00775 Bda-Chr11:7779739 Bda13g01393 Bda-Chr13:36620851 1.28E-105 dispersed
Bda01g00893 Bda-Chr1:41914948 Bda11g00775 Bda-Chr11:7779739 9.39E-104 wgd
Bda11g00775 Bda-Chr11:7779739 Bda13g01389 Bda-Chr13:36548803 2.88E-96 wgd
Bda11g00775 Bda-Chr11:7779739 Bda03g00486 Bda-Chr3:4165513 8.48E-106 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bda13g01393 CCT 4 242 14-3-3 family AT4G09000 89.1 1.1e-117 419.9
Bda01g00893 BCT,CCT 8 261 14-3-3 family AT4G09000 85.0 1.1e-115 413.3
Bda01g01183 . 6 241 14-3-3 family AT4G09000 86.0 2.1e-111 399.1
Bda13g01389 . 4 283 14-3-3 family AT4G09000 76.1 2.3e-110 395.6
Bda13g01756 . 7 260 14-3-3 family AT4G09000 79.5 4.8e-108 387.9
Bda03g00486 BCT,CCT 5 282 14-3-3 family AT4G09000 73.7 5.3e-107 384.4
Bda10g00066 . 4 246 14-3-3 family AT4G09000 75.3 2.8e-100 362.1
Bda03g00463 . 11 263 14-3-3 family AT4G09000 71.9 3.8e-97 351.7
Bda04g00113 . 10 280 14-3-3 family AT4G09000 67.2 3.0e-94 342.0
Bda02g00029 BCT 7 238 14-3-3 family AT4G09000 72.2 7.5e-93 337.4
Bda13g01729 . 4 203 14-3-3 family AT4G09000 82.5 1.1e-88 323.6
Bda06g00292 . 4 256 14-3-3 family AT4G09000 65.1 1.4e-86 316.6
Bda07g01078 . 6 268 14-3-3 family AT4G09000 64.6 1.8e-86 316.2
Bda09g00801 BCT 7 256 14-3-3 family AT4G09000 65.1 1.8e-83 306.2
Bda11g00775 . 10 238 14-3-3 family AT4G09000 68.2 8.8e-78 287.3
Bda13g01393 CCT 6 260 14-3-3 family AT1G78300 89.9 3.9e-124 441.0
Bda01g00893 BCT,CCT 10 279 14-3-3 family AT1G78300 85.3 3.1e-121 431.4
Bda01g01183 . 6 253 14-3-3 family AT1G78300 87.9 9.3e-118 419.9
Bda13g01389 . 6 301 14-3-3 family AT1G78300 77.9 2.1e-117 418.7
Bda13g01756 . 9 255 14-3-3 family AT1G78300 82.2 8.7e-108 386.7
Bda03g00486 BCT,CCT 5 281 14-3-3 family AT1G78300 74.4 2.8e-106 381.7
Bda10g00066 . 11 251 14-3-3 family AT1G78300 75.1 3.9e-100 361.3
Bda03g00463 . 11 258 14-3-3 family AT1G78300 73.4 1.8e-97 352.4
Bda04g00113 . 11 276 14-3-3 family AT1G78300 68.0 5.5e-94 340.9
Bda02g00029 BCT 7 247 14-3-3 family AT1G78300 69.5 1.6e-93 339.3
Bda13g01729 . 6 203 14-3-3 family AT1G78300 84.3 7.0e-89 323.9
Bda06g00292 . 7 262 14-3-3 family AT1G78300 65.1 2.9e-87 318.5
Bda07g01078 . 6 216 14-3-3 family AT1G78300 78.7 2.5e-86 315.5
Bda09g00801 BCT 7 259 14-3-3 family AT1G78300 64.7 2.0e-83 305.8
Bda11g00775 . 10 238 14-3-3 family AT1G78300 69.0 3.2e-78 288.5
Bda01g01183 . 6 259 14-3-3 family AT5G38480 89.0 4.7e-122 434.1
Bda13g01393 CCT 6 257 14-3-3 family AT5G38480 86.5 5.9e-117 417.2
Bda13g01756 . 9 258 14-3-3 family AT5G38480 86.8 6.5e-116 413.7
Bda01g00893 BCT,CCT 9 276 14-3-3 family AT5G38480 81.0 4.0e-113 404.4
Bda13g01389 . 6 298 14-3-3 family AT5G38480 74.1 3.5e-109 391.3
Bda03g00486 BCT,CCT 6 282 14-3-3 family AT5G38480 70.8 7.8e-101 363.6
Bda10g00066 . 10 245 14-3-3 family AT5G38480 74.6 3.1e-97 351.7
Bda13g01729 . 6 203 14-3-3 family AT5G38480 90.9 4.4e-96 347.8
Bda03g00463 . 10 260 14-3-3 family AT5G38480 71.3 6.4e-95 344.0
Bda02g00029 BCT 7 244 14-3-3 family AT5G38480 72.9 8.6e-92 333.6
Bda04g00113 . 10 277 14-3-3 family AT5G38480 66.0 3.3e-91 331.6
Bda07g01078 . 6 216 14-3-3 family AT5G38480 82.0 8.1e-90 327.0
Bda06g00292 . 7 262 14-3-3 family AT5G38480 67.8 3.4e-88 321.6
Bda09g00801 BCT 7 256 14-3-3 family AT5G38480 67.9 3.3e-83 305.1
Bda11g00775 . 9 238 14-3-3 family AT5G38480 64.3 6.9e-73 270.8
Bda13g01393 CCT 3 242 14-3-3 family AT1G35160 90.0 5.6e-119 424.1
Bda01g00893 BCT,CCT 7 261 14-3-3 family AT1G35160 85.5 2.0e-116 415.6
Bda13g01389 . 3 283 14-3-3 family AT1G35160 77.2 3.0e-112 401.7
Bda01g01183 . 6 240 14-3-3 family AT1G35160 86.8 6.7e-112 400.6
Bda13g01756 . 6 254 14-3-3 family AT1G35160 82.4 5.3e-109 391.0
Bda03g00486 BCT,CCT 4 281 14-3-3 family AT1G35160 74.1 1.4e-106 382.9
Bda10g00066 . 6 246 14-3-3 family AT1G35160 75.1 1.3e-99 359.8
Bda03g00463 . 1 258 14-3-3 family AT1G35160 70.5 3.0e-96 348.6
Bda04g00113 . 11 282 14-3-3 family AT1G35160 66.9 8.2e-94 340.5
Bda02g00029 BCT 2 237 14-3-3 family AT1G35160 71.8 3.1e-93 338.6
Bda13g01729 . 3 203 14-3-3 family AT1G35160 84.2 3.2e-90 328.6
Bda06g00292 . 2 255 14-3-3 family AT1G35160 65.6 2.2e-86 315.8
Bda07g01078 . 6 216 14-3-3 family AT1G35160 77.3 3.7e-86 315.1
Bda09g00801 BCT 7 255 14-3-3 family AT1G35160 64.9 1.1e-82 303.5
Bda11g00775 . 10 238 14-3-3 family AT1G35160 68.2 9.1e-77 283.9
Bda01g01183 . 5 254 14-3-3 family AT5G16050 84.0 1.3e-114 409.5
Bda13g01393 CCT 3 255 14-3-3 family AT5G16050 79.1 8.2e-109 390.2
Bda13g01756 . 7 255 14-3-3 family AT5G16050 81.9 1.2e-107 386.3
Bda01g00893 BCT,CCT 10 274 14-3-3 family AT5G16050 75.5 8.5e-106 380.2
Bda13g01389 . 3 296 14-3-3 family AT5G16050 68.0 1.7e-101 365.9
Bda03g00486 BCT,CCT 4 280 14-3-3 family AT5G16050 67.1 2.6e-94 342.0
Bda10g00066 . 6 251 14-3-3 family AT5G16050 68.3 2.4e-92 335.5
Bda13g01729 . 4 203 14-3-3 family AT5G16050 84.0 5.5e-89 324.3
Bda03g00463 . 10 257 14-3-3 family AT5G16050 67.3 3.6e-88 321.6
Bda07g01078 . 5 216 14-3-3 family AT5G16050 81.6 8.0e-88 320.5
Bda04g00113 . 10 275 14-3-3 family AT5G16050 62.8 7.4e-86 313.9
Bda02g00029 BCT 1 247 14-3-3 family AT5G16050 64.7 1.7e-85 312.8
Bda06g00292 . 1 262 14-3-3 family AT5G16050 61.4 1.1e-81 300.1
Bda09g00801 BCT 4 256 14-3-3 family AT5G16050 60.4 1.7e-74 276.2
Bda11g00775 . 10 238 14-3-3 family AT5G16050 60.8 3.8e-66 248.4
Bda10g00066 . 6 246 14-3-3 family AT5G10450 87.6 1.2e-115 412.9
Bda03g00463 . 9 260 14-3-3 family AT5G10450 82.5 5.2e-111 397.5
Bda04g00113 . 9 276 14-3-3 family AT5G10450 77.2 2.1e-107 385.6
Bda13g01393 CCT 3 251 14-3-3 family AT5G10450 76.8 3.3e-105 378.3
Bda01g00893 BCT,CCT 5 270 14-3-3 family AT5G10450 73.0 2.3e-103 372.1
Bda01g01183 . 7 251 14-3-3 family AT5G10450 74.8 5.8e-102 367.5
Bda13g01756 . 7 255 14-3-3 family AT5G10450 73.6 7.8e-99 357.1
Bda13g01389 . 3 292 14-3-3 family AT5G10450 66.0 6.6e-98 354.0
Bda03g00486 BCT,CCT 7 281 14-3-3 family AT5G10450 65.9 2.2e-93 339.0
Bda02g00029 BCT 1 253 14-3-3 family AT5G10450 65.0 5.6e-89 324.3
Bda06g00292 . 1 256 14-3-3 family AT5G10450 62.5 4.6e-83 304.7
Bda13g01729 . 4 203 14-3-3 family AT5G10450 74.1 3.6e-80 295.0
Bda09g00801 BCT 7 256 14-3-3 family AT5G10450 62.8 1.4e-79 293.1
Bda07g01078 . 7 216 14-3-3 family AT5G10450 71.6 3.1e-79 292.0
Bda11g00775 . 5 238 14-3-3 family AT5G10450 58.5 2.7e-67 252.3
Bda01g01183 . 4 261 14-3-3 family AT3G02520 89.6 3.3e-126 448.0
Bda13g01393 CCT 6 259 14-3-3 family AT3G02520 85.5 2.5e-118 421.8
Bda13g01756 . 9 255 14-3-3 family AT3G02520 89.1 7.3e-118 420.2
Bda01g00893 BCT,CCT 10 278 14-3-3 family AT3G02520 80.7 7.5e-115 410.2
Bda13g01389 . 6 300 14-3-3 family AT3G02520 73.6 5.1e-111 397.5
Bda03g00486 BCT,CCT 5 280 14-3-3 family AT3G02520 73.2 1.2e-104 376.3
Bda10g00066 . 10 248 14-3-3 family AT3G02520 75.7 1.2e-99 359.8
Bda13g01729 . 6 203 14-3-3 family AT3G02520 92.4 9.9e-99 356.7
Bda03g00463 . 10 257 14-3-3 family AT3G02520 71.8 1.7e-95 345.9
Bda04g00113 . 10 275 14-3-3 family AT3G02520 68.0 9.6e-94 340.1
Bda07g01078 . 4 216 14-3-3 family AT3G02520 82.2 2.8e-93 338.6
Bda02g00029 BCT 4 257 14-3-3 family AT3G02520 68.8 6.9e-92 334.0
Bda06g00292 . 4 261 14-3-3 family AT3G02520 67.3 1.9e-89 325.9
Bda09g00801 BCT 4 256 14-3-3 family AT3G02520 65.5 4.5e-83 304.7
Bda11g00775 . 10 238 14-3-3 family AT3G02520 67.5 6.9e-76 280.8
Bda10g00066 . 6 246 14-3-3 family AT5G65430 87.6 3.9e-116 414.5
Bda03g00463 . 9 259 14-3-3 family AT5G65430 82.9 5.9e-112 400.6
Bda04g00113 . 9 277 14-3-3 family AT5G65430 77.3 2.1e-109 392.1
Bda13g01393 CCT 8 242 14-3-3 family AT5G65430 80.1 5.9e-104 374.0
Bda01g00893 BCT,CCT 5 261 14-3-3 family AT5G65430 75.6 6.5e-103 370.5
Bda01g01183 . 7 241 14-3-3 family AT5G65430 78.4 1.9e-102 369.0
Bda13g01756 . 10 257 14-3-3 family AT5G65430 74.3 2.6e-99 358.6
Bda13g01389 . 8 283 14-3-3 family AT5G65430 68.2 1.2e-96 349.7
Bda03g00486 BCT,CCT 4 282 14-3-3 family AT5G65430 66.1 1.5e-94 342.8
Bda02g00029 BCT 1 238 14-3-3 family AT5G65430 69.3 1.8e-89 325.9
Bda06g00292 . 1 256 14-3-3 family AT5G65430 64.5 2.3e-84 308.9
Bda13g01729 . 7 203 14-3-3 family AT5G65430 75.3 2.0e-80 295.8
Bda09g00801 BCT 7 256 14-3-3 family AT5G65430 63.2 7.7e-80 293.9
Bda07g01078 . 7 216 14-3-3 family AT5G65430 70.6 5.0e-79 291.2
Bda11g00775 . 5 238 14-3-3 family AT5G65430 57.7 3.4e-67 251.9
Bda06g00292 . 1 262 14-3-3 family AT2G42590 77.5 1.7e-109 392.5
Bda02g00029 BCT 1 253 14-3-3 family AT2G42590 78.3 2.4e-108 388.7
Bda09g00801 BCT 5 259 14-3-3 family AT2G42590 71.0 1.2e-94 343.2
Bda01g01183 . 8 248 14-3-3 family AT2G42590 73.4 9.3e-92 333.6
Bda13g01393 CCT 8 248 14-3-3 family AT2G42590 70.5 1.8e-90 329.3
Bda13g01756 . 11 256 14-3-3 family AT2G42590 71.1 1.1e-87 320.1
Bda01g00893 BCT,CCT 12 267 14-3-3 family AT2G42590 66.0 1.4e-87 319.7
Bda10g00066 . 11 248 14-3-3 family AT2G42590 67.6 2.2e-85 312.4
Bda13g01389 . 8 289 14-3-3 family AT2G42590 61.0 1.2e-83 306.6
Bda03g00463 . 11 257 14-3-3 family AT2G42590 62.8 3.1e-79 292.0
Bda03g00486 BCT,CCT 8 280 14-3-3 family AT2G42590 60.1 5.3e-79 291.2
Bda04g00113 . 11 275 14-3-3 family AT2G42590 59.6 2.0e-78 289.3
Bda13g01729 . 8 203 14-3-3 family AT2G42590 69.9 3.2e-68 255.4
Bda07g01078 . 8 215 14-3-3 family AT2G42590 63.0 5.7e-65 244.6
Bda11g00775 . 12 240 14-3-3 family AT2G42590 55.3 4.0e-58 221.9
Bda02g00029 BCT 6 242 14-3-3 family AT1G22300 78.9 2.4e-102 368.6
Bda06g00292 . 6 261 14-3-3 family AT1G22300 72.3 4.2e-99 357.8
Bda09g00801 BCT 6 259 14-3-3 family AT1G22300 70.5 6.5e-92 334.0
Bda01g01183 . 4 246 14-3-3 family AT1G22300 70.8 6.5e-92 334.0
Bda13g01393 CCT 8 246 14-3-3 family AT1G22300 69.9 3.0e-89 325.1
Bda13g01756 . 8 263 14-3-3 family AT1G22300 67.1 1.5e-88 322.8
Bda01g00893 BCT,CCT 12 265 14-3-3 family AT1G22300 65.6 2.4e-86 315.5
Bda13g01389 . 8 287 14-3-3 family AT1G22300 59.9 2.1e-82 302.4
Bda03g00486 BCT,CCT 8 280 14-3-3 family AT1G22300 61.2 4.0e-81 298.1
Bda10g00066 . 11 248 14-3-3 family AT1G22300 65.5 8.8e-81 297.0
Bda03g00463 . 11 257 14-3-3 family AT1G22300 61.5 1.3e-76 283.1
Bda04g00113 . 11 275 14-3-3 family AT1G22300 58.4 2.1e-74 275.8
Bda13g01729 . 5 203 14-3-3 family AT1G22300 68.8 4.1e-70 261.5
Bda07g01078 . 4 205 14-3-3 family AT1G22300 63.4 2.0e-64 242.7
Bda11g00775 . 12 238 14-3-3 family AT1G22300 53.2 7.5e-56 214.2
Bda02g00029 BCT 6 242 14-3-3 family AT1G34760 78.9 5.3e-102 367.5
Bda06g00292 . 11 260 14-3-3 family AT1G34760 76.0 1.9e-99 359.0
Bda09g00801 BCT 6 258 14-3-3 family AT1G34760 69.6 1.0e-89 326.6
Bda01g01183 . 4 250 14-3-3 family AT1G34760 70.0 5.2e-89 324.3
Bda13g01393 CCT 12 245 14-3-3 family AT1G34760 71.8 1.5e-88 322.8
Bda13g01756 . 8 255 14-3-3 family AT1G34760 69.4 3.7e-87 318.2
Bda01g00893 BCT,CCT 16 264 14-3-3 family AT1G34760 67.1 2.0e-85 312.4
Bda13g01389 . 12 286 14-3-3 family AT1G34760 61.1 3.0e-81 298.5
Bda10g00066 . 15 247 14-3-3 family AT1G34760 67.0 8.9e-81 297.0
Bda03g00486 BCT,CCT 8 281 14-3-3 family AT1G34760 61.3 8.9e-81 297.0
Bda03g00463 . 11 258 14-3-3 family AT1G34760 60.9 3.3e-75 278.5
Bda04g00113 . 15 278 14-3-3 family AT1G34760 58.7 7.3e-75 277.3
Bda13g01729 . 5 203 14-3-3 family AT1G34760 69.3 3.5e-69 258.5
Bda07g01078 . 4 205 14-3-3 family AT1G34760 64.9 7.5e-64 240.7
Bda11g00775 . 12 238 14-3-3 family AT1G34760 57.4 1.5e-56 216.5
Bda13g00682 . 43 130 14-3-3 family AT1G34760 84.1 1.3e-36 150.2
Bda02g00029 BCT 3 244 14-3-3 family AT1G26480 78.5 5.5e-105 377.5
Bda06g00292 . 5 262 14-3-3 family AT1G26480 74.4 1.0e-103 373.2
Bda09g00801 BCT 4 259 14-3-3 family AT1G26480 69.9 6.3e-93 337.4
Bda01g01183 . 5 256 14-3-3 family AT1G26480 72.8 4.1e-92 334.7
Bda13g01393 CCT 8 250 14-3-3 family AT1G26480 72.5 2.0e-91 332.4
Bda01g00893 BCT,CCT 12 275 14-3-3 family AT1G26480 68.0 9.4e-89 323.6
Bda13g01756 . 7 255 14-3-3 family AT1G26480 69.9 1.4e-87 319.7
Bda13g01389 . 8 291 14-3-3 family AT1G26480 62.1 4.1e-84 308.1
Bda10g00066 . 11 247 14-3-3 family AT1G26480 67.9 7.0e-84 307.4
Bda03g00486 BCT,CCT 8 280 14-3-3 family AT1G26480 61.5 6.1e-80 294.3
Bda03g00463 . 11 257 14-3-3 family AT1G26480 63.2 7.5e-78 287.3
Bda04g00113 . 11 275 14-3-3 family AT1G26480 60.0 2.2e-77 285.8
Bda13g01729 . 4 203 14-3-3 family AT1G26480 69.0 4.8e-69 258.1
Bda07g01078 . 5 205 14-3-3 family AT1G26480 65.7 3.3e-65 245.4
Bda11g00775 . 12 238 14-3-3 family AT1G26480 56.6 6.6e-58 221.1
Bda02g00029 BCT 6 236 14-3-3 family AT1G78220 53.0 4.3e-64 241.5
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0032145 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda11g00775 Bda_Chr11 FPKM 0.154754 0.0 0.0 0.0 0.721441 0.363325 0.680981 1.938553 1.497258