Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00775 CGTTTACCTGCAATGGCGGTTACGATTTCAGCGCGGGAAGAGAATGTTTACTTGGCTAAGCTCGCTGAGCAAGCTAAGCGCTACGAAGAGATGGTGGAGTTTATGGAGAAGGTCTCCACTGCCGTTGAGGGCGACGATCTCACTCTCGAGGAGCGAAATCTCCTCCTCTCCGTTGCTTACAAAAACGTGATCGGGGCTCGAAGGGCATCGTGGCGTATTATCTCATCCATCGAGCAGAACGAAGAGAGTCGGGGTAATGATGACCGTGTCCTCTCCATCATACGCGAATATAAATCCAAGATTGAGAGCGAACTGTCGAACATCTGCAGTGGGGTCCTCAAGCTCCTGGACATTGTGCAGCATGCGTCCATGCCTTTGACGGTTTTTTGTTTAAATATTAGACGGTTCTCTCAATTGATATTAGTTTGTTCATCACTTTCGAACAATGTATTATCCTTCAACGTAGTTGATCATGTGCAGGATATTTCTACCTCAGAAATAGCTCCAACTCATCCTATCCGACTTGGACTGGCTCTGAATTTCTCTGTCTTTTACTATGAGATTCTAAATTCTCCCGATCGTGCTTGCAGTCTTGCAAAACAGGCTTTTGATGAAGCAGTTGCTGAATTGGACACACTTGGTGTGAAGTATTACAAGGATAGCACTCAAATCATGCAGCTTCTTCGCGATAATCTCACTATATGGACTTCTGATTATGCAGGTGTGAAAGTGTAA 735 45.31 RLPAMAVTISAREENVYLAKLAEQAKRYEEMVEFMEKVSTAVEGDDLTLEERNLLLSVAYKNVIGARRASWRIISSIEQNEESRGNDDRVLSIIREYKSKIESELSNICSGVLKLLDIVQHASMPLTVFCLNIRRFSQLILVCSSLSNNVLSFNVVDHVQDISTSEIAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAVAELDTLGVKYYKDSTQIMQLLRDNLTIWTSDYAGVKV 244
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7779739 7780858 + Bda005524.1 Bda11g00775 15883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00775 244 PANTHER 14-3-3 PROTEIN 8 241 IPR000308 -
Bda11g00775 244 SUPERFAMILY 14-3-3 protein 10 238 IPR036815 -
Bda11g00775 244 PANTHER 14-3-3-LIKE PROTEIN GF14 CHI-RELATED 8 241 - -
Bda11g00775 244 Gene3D - 3 243 IPR036815 -
Bda11g00775 244 SMART 1433_4 12 244 IPR023410 -
Bda11g00775 244 Pfam 14-3-3 protein 160 236 IPR023410 -
Bda11g00775 244 Pfam 14-3-3 protein 18 118 IPR023410 -
Bda11g00775 244 Coils Coil 18 38 - -
Bda11g00775 244 PRINTS 14-3-3 protein zeta signature 47 76 IPR000308 -
Bda11g00775 244 PRINTS 14-3-3 protein zeta signature 182 208 IPR000308 -
Bda11g00775 244 PRINTS 14-3-3 protein zeta signature 209 238 IPR000308 -
Bda11g00775 244 PRINTS 14-3-3 protein zeta signature 155 181 IPR000308 -
Bda11g00775 244 PIRSF 2014/3/3 6 243 IPR000308 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g00775 Bda-Chr11:7779739 Bda13g01393 Bda-Chr13:36620851 1.28E-105 dispersed
Bda01g00893 Bda-Chr1:41914948 Bda11g00775 Bda-Chr11:7779739 9.39E-104 wgd
Bda11g00775 Bda-Chr11:7779739 Bda13g01389 Bda-Chr13:36548803 2.88E-96 wgd
Bda11g00775 Bda-Chr11:7779739 Bda03g00486 Bda-Chr3:4165513 8.48E-106 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00775 K06630 - qsu:112026333 305.834