Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00791 ATGGCGTTTGTTCGACCTTTCACTCCACCTCCTTCTCTATCCCACGCACATAAGACAGTATTTTTGCACAACTTATTCTTCTCGTCAATTCTTTCAGCACCTTTATGTTACGAAAAGAGGTTCGCTGAGTGTAGTGTTGTTGCAAGTCCAGCCGAAGTGTCGCCTGGGCTTGATCGTGAGGAGGACGGAGACAGGGTTGTTTTGGGTCCCGATTCTGAAGAGGAGCGACGATTGGAAAAAATCAAGGCGGAGTATGATTGGACAGAAGAATGGTATCCGCTGTACCTGACGGAGAACGTACCGGTCGATGCTCCACTTGGTCTTTTAGTGTTCGATAAGGAGCTAGTGCTCTATCGTGATGGCTCCGGCCAACTGATTGATGGGAGGCTGGAATGTCTTTATCATGGTTGGCAATTCGAAGGAGCTGGTAAATGTATTCCGAGCCACTCGAAGATTCCTAAATCAGCATGCCTAAAGACATATGAAGTTAGAGATTCCCAAGGAGTTGTGTGGGTGTGGATGTCACAAAAAACTTCTCCAAACCTCAGTAAAATACCTTGGTTTGACAATTTTGATAAACCGGGGTTTCAGGATATTTCAACGACTCACGAGCTTCCTTATGATCACTCCATCCTTCTTGAGAACCTCATGGATCCAGCCCACATACCAATCTCACACGACAGAACAGATTTTACAGCCAAAAGAGAAGACGCACAAGCGCTATCTTTTGAAGTGATTGAGTATACTGATCGTGGATTTGCTGGGTGGTGGGGTCGGACAAAAGATCAACCATTGCCAAACTTCTCAAGGTTTGAGGCGCCTTGTGTTCTCCAAAATAACAGAGATATTGTATCTGCCAATGGGAAAGTAGATTACTTCTCAGGTCTCTTTCTTTGTAGACCAACTGGCCAGGGTAAATCCATGTTAATAGTAAGGTTTGGATCAACAAGAAGGTCGCTCCTAACCAAACTGTTACCAAAATGGTACTTACATCAGAATGGAGCCAAGGTCTTTGAGCAAGACATGGGATTCCTTTCTTCCCAAAATGAGGTTTTGATGAGAGAAAAGGTGCCTACAAAGGAACTTTACCTAAACTTAAGATCATCAGATACATGGGTGGCTGAATATCGGAAGTGGATTGACAAAGTTGGACACGGGATGCCTTACCATTTCGGGCATGGTAGTGCTAGCTTCAATTTCGGACCTCTCTGTACATACCTGGCCATAAGCTGCTTGGATCGATTTCTCTCCATTTATGATCTGCCTAAAGGCAAAGCTTGGACGATGCATTTGGTATCGGTGGCATGTCTATCTCTCGCAGCCAAACTAGAGGAAACCGAAGTTCCTCTTTCCGTCGATTTACAGGTTGGTGTATCAAAATTTGTTTTTGAAGCTAAAACTATACAAAGAATGGAGCTTTTGGTTTTGAGCACATTAAATTGGAGAATGCAGGCTATTACCCCTTTTTCCTTCATAGACTTTTTCTTATGCAAGATTGGCGATGATCGAATGCCGTTTAGTCTTTCGTTGAGCAAAGCCTCTCAGTTGATACTACGCACAGTTCAAGGTCTGCTTCCATTCCTAAGTTATATTTTTGGGGCAATTAATCGTGAGACGATTTTCATGTTTTTTCTTGGTTGGAAATTGAACTCAGATTCTTATTTTTTGGAATCCCGGCCGTCGGAAATCGCATTGGCTGTGGCCATATCTGTTACCGGAGAAATCCAGGACATTGATACGGACAAAGCAATTTCTACTCTCACCCACCATGAAAAAGTGTTGGATTGTGTTAGAATGATCCAGGAAGTGTTATTAAAGAACGAGTCTGAAAATGATTCAAGAGCTTATGTTCAATCTTTTCCCTCTAGTCCGAGCGGGGTGTTGGATGTTCTGTGCTTTAGCTCGACGAGTGACGACGGGCCGGATCAGAGTTCGTCCGGCAATAGTCGAGATCGTAAGCGGAGGAATCGAATTCAAAACTGTAAATTGGAGCCATAG 1998 43.79 MAFVRPFTPPPSLSHAHKTVFLHNLFFSSILSAPLCYEKRFAECSVVASPAEVSPGLDREEDGDRVVLGPDSEEERRLEKIKAEYDWTEEWYPLYLTENVPVDAPLGLLVFDKELVLYRDGSGQLIDGRLECLYHGWQFEGAGKCIPSHSKIPKSACLKTYEVRDSQGVVWVWMSQKTSPNLSKIPWFDNFDKPGFQDISTTHELPYDHSILLENLMDPAHIPISHDRTDFTAKREDAQALSFEVIEYTDRGFAGWWGRTKDQPLPNFSRFEAPCVLQNNRDIVSANGKVDYFSGLFLCRPTGQGKSMLIVRFGSTRRSLLTKLLPKWYLHQNGAKVFEQDMGFLSSQNEVLMREKVPTKELYLNLRSSDTWVAEYRKWIDKVGHGMPYHFGHGSASFNFGPLCTYLAISCLDRFLSIYDLPKGKAWTMHLVSVACLSLAAKLEETEVPLSVDLQVGVSKFVFEAKTIQRMELLVLSTLNWRMQAITPFSFIDFFLCKIGDDRMPFSLSLSKASQLILRTVQGLLPFLSYIFGAINRETIFMFFLGWKLNSDSYFLESRPSEIALAVAISVTGEIQDIDTDKAISTLTHHEKVLDCVRMIQEVLLKNESENDSRAYVQSFPSSPSGVLDVLCFSSTSDDGPDQSSSGNSRDRKRRNRIQNCKLEP 665
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7884683 7893176 - Bda005541.1 Bda11g00791 15899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00791 665 SUPERFAMILY ISP domain 78 178 IPR036922 GO:0051537
Bda11g00791 665 CDD CYCLIN 398 476 IPR013763 -
Bda11g00791 665 Gene3D - 398 484 - -
Bda11g00791 665 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 127 172 IPR017941 GO:0051537
Bda11g00791 665 Gene3D - 196 385 - -
Bda11g00791 665 SUPERFAMILY Cyclin-like 396 483 IPR036915 -
Bda11g00791 665 SMART cyclin_7 389 477 IPR013763 -
Bda11g00791 665 Pfam Pheophorbide a oxygenase 271 356 IPR013626 GO:0010277
Bda11g00791 665 Pfam Cyclin, C-terminal domain 487 616 IPR004367 -
Bda11g00791 665 Gene3D - 121 195 IPR036922 GO:0051537
Bda11g00791 665 PANTHER PROTEIN TIC 55, CHLOROPLASTIC 59 393 - -
Bda11g00791 665 MobiDBLite consensus disorder prediction 645 665 - -
Bda11g00791 665 MobiDBLite consensus disorder prediction 634 665 - -
Bda11g00791 665 SUPERFAMILY Bet v1-like 168 386 - -
Bda11g00791 665 Gene3D - 485 602 - -
Bda11g00791 665 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 59 393 - -
Bda11g00791 665 Pfam Cyclin, N-terminal domain 396 483 IPR006671 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda11g00791 Bda13g01369 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00654 Bda-Chr1:33528371 Bda11g00791 Bda-Chr11:7884683 0 dispersed
Bda03g00012 Bda-Chr3:330573 Bda11g00791 Bda-Chr11:7884683 8.56E-21 dispersed
Bda05g00225 Bda-Chr5:31674711 Bda11g00791 Bda-Chr11:7884683 7.57E-20 dispersed
Bda09g00353 Bda-Chr9:4515918 Bda11g00791 Bda-Chr11:7884683 9.16E-28 dispersed
Bda09g00354 Bda-Chr9:4525871 Bda11g00791 Bda-Chr11:7884683 4.23E-19 dispersed
Bda11g00791 Bda-Chr11:7884683 Bda14g01328 Bda-Chr14:14972172 1.33E-48 dispersed
Bda11g00791 Bda-Chr11:7884683 Bda13g01369 Bda-Chr13:36271879 2.07E-72 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00791 - - jre:109005194 587.03