Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00797 ATGTTTTCCAAGCTCCACCGTCAACCTCAATCCCTCCCCTTTTCTAATCCCTTCCAAATCCCTGCAAGAGAATGTCATCACCCGGAGGAAGAAGAAGAAGAAGTAAGCCCCGTATGTCGTACACCATCCAGAAAGACCTTCGAGCCATCCTCCGGCGACTGCGCCACGATTGAAGTTGTCAAACGCCCCCGTGGCCGCCCTCCTGGCTCCAAGAACAAACCCAAAACGGGGGTTGTTGCCGCTCTCGATCCGGAGCCTTCGATGAGCCCTTATATTCTCGAAGTTCCCGGAGGTGGTGATGTCGTCGAAGCCATTGCCCGCTTTTGCCGCCAAAAAAATATGGGGCTTTGCATTCTCTCGGGCTCTGGCACGGTTTCTAACGTTACTCTACAGCAACCCTCTGCCACTCCCGGAGCGACGGTGACTTTTCATGGTCGGTTTCATATACTCTCCATCTGCGCCACGTTTCTCCCCCATTCGACGGCGTTTCCGGTTCCCAATGGCTTTGCTGTCTATCTGGCCGGTCCTCAGGGCCAGGTCGTCGGCGGTTTAGTCTCTGGAAATTTGATTGCCGCCGGAAGTGTGTTCGTTATAGCTTCTTCGTTCGACAATCCGTCTTATCACCGACTTTCGGATGAGGATGAGACTAAAAACTCAGACGCTAGCGGTGGCGGTGAGAAAAATTCTCCTTTAGTCTCCGGTGCTAGAGATAGTGTGAGTCACGCTCCGGCGGAGCCGGGTGGCATGCCTACTTATAGCTGCCGCGTTCCCTCCGATGTAATATGGGCTCCCACTGCAAGAGCACCTCCACCACCATACTAA 822 54.01 MFSKLHRQPQSLPFSNPFQIPARECHHPEEEEEEVSPVCRTPSRKTFEPSSGDCATIEVVKRPRGRPPGSKNKPKTGVVAALDPEPSMSPYILEVPGGGDVVEAIARFCRQKNMGLCILSGSGTVSNVTLQQPSATPGATVTFHGRFHILSICATFLPHSTAFPVPNGFAVYLAGPQGQVVGGLVSGNLIAAGSVFVIASSFDNPSYHRLSDEDETKNSDASGGGEKNSPLVSGARDSVSHAPAEPGGMPTYSCRVPSDVIWAPTARAPPPPY 273
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7938525 7939346 - Bda005547.1 Bda11g00797 15905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00797 273 CDD DUF296 90 200 IPR005175 -
Bda11g00797 273 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 24 272 IPR014476 GO:0003680
Bda11g00797 273 MobiDBLite consensus disorder prediction 207 255 - -
Bda11g00797 273 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED 24 272 - -
Bda11g00797 273 Gene3D - 89 221 - -
Bda11g00797 273 MobiDBLite consensus disorder prediction 1 52 - -
Bda11g00797 273 SUPERFAMILY AF0104/ALDC/Ptd012-like 87 215 - -
Bda11g00797 273 Pfam Plants and Prokaryotes Conserved (PCC) domain 90 204 IPR005175 -
Bda11g00797 273 MobiDBLite consensus disorder prediction 23 39 - -
Bda11g00797 273 MobiDBLite consensus disorder prediction 1 17 - -
Bda11g00797 273 MobiDBLite consensus disorder prediction 207 221 - -
Bda11g00797 273 ProSiteProfiles PPC domain profile profile. 85 223 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g00797 Bda-Chr11:7938525 Bda07g00512 Bda-Chr7:6538506 6.37E-46 dispersed
Bda11g00797 Bda-Chr11:7938525 Bda13g01356 Bda-Chr13:35930228 2.41E-118 wgd
Bda11g00797 Bda-Chr11:7938525 Bda03g00458 Bda-Chr3:3960199 8.32E-111 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00797 - - zju:107421268 337.035