Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00799 ATGGAGGTCTTAGATTCCAAGCCTGTAGATTCATCGCAATCTGTCCGGGTAGCTGTTAATATTAGACCTTTGATAACACCTGAGCTTCTCGTTGGATGTACGGACTGCATCACTATTGTTCAGGGAGAACCTCAGGTGGTTATTGGCTCTCATGCATTCACTTATGATTACGTTTATGGTAACACCGGATCAGCTCCTTCCACCATTTATGAAGATTGTGTTGCTCCACTTGTTGATGCTCTTTTCCACGGCTACAATGCAACTGTTCTTGCTTATGGCCAGACTGGTTCTGGAAAGACATACACTATGGGTACAAATTACAATGGAGATGATATCAATGGTGGAATAATACCTAAAGTAATGGAAAATATATATAAAAGAGTCGAGGTAATGAGAAATTCAGTGGAGTTTTTGATCAGAGTATCATTTATCGAGATATTTAAGGAAGAAGTATTTGATTTGCTCGATTCAAATATATCAGCTATAACCAAAGGTGAAGGGGCTCTTGGTAAACCCTTTGTGCCCATGAGAGCTCCTATTCAAATCAGAGAAACAGTTAATGGAGGGATAACACTAGCAGGTGTCACTGAGGCTGAAGTGAGAACCAAAGAAGAGATGGCCTCATACTTGTCACGAGGTTCTTTATCTCGCGCAACAGGGAGTACCAACATGAATAGTCAGTCAAGTCGATCACATGCTATATTTACAATTACCATGGAGCAAAAGAAAAGCGTTGGCAGCCTGTCTGGTGTATCTCATGATGATACAAGTGAGGATATACTATGTGCAAAACTCCATTTGGTGGATCTAGCTGGTTCAGAACGAGCAAAACGAACAGGTGCTGATGGCTTGCGTTTTAAAGAAGGAATTCATATCAATAAGGGTTTGTTGGCTCTTGGCAATGTTATAAGTGCATTGGGAGATGAGAAGAAAAGAAAAGAAGGAGGCCATGTACCTTATCGAGATAGCAAGCTAACTCGTTTGTTACAGGATTCTTTGGGGGGAAACAGTAAAACCGTCATGATTGCATGTGTTAGTCCTGCTGACACAAATGCTGAGGAGACGTTGAATACATTGAAATATGCAAATCGTGCTCGTAATATTCAAAACAAGGCAATTGTTAACCGTGATCCGGCGACAGCTCAAATTCAAAGAATGAAGAGCCAAATTGAACAATTGCAATCTGAGCTTCTATTCTATCGTGGTGACGTGGGTGCACCATATGAGGAACTTCAGATTCTTAAACACAAAGTATCAGTACTCGAAGCAAGTAATGCAGAGTTAAAGCAAGAGGTTTTAGAGCGTCAAATTACATGCAAGCATTTAACTCAACGTGCTATAGATGCTCAGGTGGAAAAAGACAAACTGGTTATGAAAATCGAATCTGCCCGAAACGGCAAATCATGGGATGAGATTGACTCCACTTCTGAAAAGGATTATGATTTAGTTCAAAATTACGTTTCAAAAATACAAGAGCTTGAAGCAGAACTATTGCATTCAAGAAACACAAATGGCTCAAAGATAAATCGATTTCATGATTGTATGGATACAGACGAAGATAAGGAAGATTGCAAAAATGTTTTGTTTCCACCAAGTGATTATGCATTTGATTTTGAGCCCAAATCTGGAGATTTTTCAGATGAGGTTGAAGATCATGAGAAGGAACTCGAACATTCTTCTCTTCAAGAAAAATTTGATAAGGAGCTTAAAGAACTAGATAAGAAGCTTGAACTGAAGGAGGCTGAAATGAAGCGGTTTGCTGGTGGCGATGCATCAGTACTTAAACAACATTATGAAAAAAAAGTTCAAGAGTTGGAAATAGAGAAACGGACCTTACAGAGAGAAATCGAAGTACTTACATGTAATCTTGCAAATATATCTTCTACGTCTGGTGATGGTGCTCAAAAGTTGAAGGAAGAATATCTTCAGAAATTGAATGTACTTGAAGCGCAGGTTTCTGAATTGAAAAAGAAGCAAGATGCTCAATCTCAATTAGTGAGACAAAAGCAAAAGAGTGATGAAGCTGCAAAGAGATTGCAGGATGAGATCCAAAGGATAAAATCTCAAAAGGTTCAACTGCAGCATAAGATTAAACAAGAGTCTGAGCAGTTTCGGTTATGGAAGGCTTCACGAGAAAAAGAAGTGCTTCAGCTTAAGAAAGAAGGGAGAAGGAATGAGTATGAGATGCACAAGTTGTTGGCCCTGAATCAGAGACAGAAAATGGTTTTGCAAAGGAAAACCGAAGAAGCTGCACTAGCAACGAAAAGATTAAAAGATCTTTTGGAATCTCGAAAGGCTGCTTCACGAGAAACGTCTAATTTCAGAAACGGAAATGGTTCAGGGCTCCAGGCTCTTATGCAAGAAATTGAGCACGAACTTGAAGTCACTGTACATGTGCACGAAGTTCGTTCTGAATATGAGCGGCAAATGGAAGAGAGGGGAAGAATGGCTAAGGAGGCTGCAATGCTTAAGGAAAATAATCAAAGTGACAGTGCCCAATCAATGTCTCCCGGTGCAAGAAATTCAAGAGTTTTTGCACTTGAAAACATGCTTGCTACTTCATCTAGCACGTTGGTTTCCATGGCATCACAATTGTCAGAGGCAGAGGACCGTGAGCGACTTTTCAGTGGCAGAGGACGTTGGAATCAAGTTCGATCTCTTATTGATGCAAAAAACATAATGAATTTCTTGTTTGATTTAGCATCTTCTTCCAGGTGCTTGTTAAGAGATAAGGAAGTTGCCCGCAGAGAAAAAGAGTTAGAAATAAGAGAATTGAAGCAAAAATTATTTAATCTCAATAGTTCGCTCAGAAAATTAGAGATGCAAAAAGCTGAACTTATTCATCAGAATTCAACCTTAAAGAATTACACCATGAATAATAGCTCCATGGAACCTCCCAAAAACAGGGGATTTAAGTATGACTCACACAAGCAGGAAATTCGCTCTTCTGTCATCTTGTTGGAGGACATGGATACGTCAGAATCTGAATGTTCAGACATTGATGATACAACTGATGATGATTGGGTCGATTCAGCAAAACAACAGGCTGTGAGAAAAACTAGTAAAAGTAATAGAGGTCGTTCAAGTATGGCACCATCATCGGGTGGTAATCACTTTCTGACTCCAGCATTAGACGGTTTTGGAGAAGGTACTAGTCGTGTGAATAGCATTTCTGCCTCTGGATTGTGTTGCTCCTGCAGTAAAGTTTCGTTGTGCAAGACAAACAAATGCCAATGCAGAGCTAATGGAGGTTCTTGCGGATCGTCATGTGGTTGTATACTCTCTAAATGTACAAATCGAGATGGGAAAAGTGAGCAGGATGTGCAATCTCAGATGCAAGATGAAGAAAATGGAAATGGTTCTGAAATTGATGAAACAGATAGAAACCAGGGTCTTGCTTCGCATGGAGCAATGTTACTTCAAAGTGCATTAGCTGACAAGCCTGTCGATGCAAGAAGAAAAGCTTTATCTGACATTGGCAACACTCTGACTAAGTCAAATATACCAAAGCCAAATCAGAGAAAGAAATGGAGCAAATCAACAATTCAGCTAGTTACTGATGATTCAAGTCCAATGCAACCAAACAACAGTGAAGCCATTCAATCCCAGAAGCCAGAAAACAGCACCGGTGAGGTAAACATCCCATTAAAGTTACCCAGAGCAATGAGATCTGCTTCATCAAACGGTGGAGGATTATTGAGAGAGAGGAATCTGAGCCAGATTGATGAATCAGTGGGCAGTAAAGATGGGGGAGCGCTTGTTCCAGCAAGTCCTGTAAGACAGAAGAAGGCCTCGGACGAGAAAGAGAACTGTGGCCTTTAA 3822 40.21 MEVLDSKPVDSSQSVRVAVNIRPLITPELLVGCTDCITIVQGEPQVVIGSHAFTYDYVYGNTGSAPSTIYEDCVAPLVDALFHGYNATVLAYGQTGSGKTYTMGTNYNGDDINGGIIPKVMENIYKRVEVMRNSVEFLIRVSFIEIFKEEVFDLLDSNISAITKGEGALGKPFVPMRAPIQIRETVNGGITLAGVTEAEVRTKEEMASYLSRGSLSRATGSTNMNSQSSRSHAIFTITMEQKKSVGSLSGVSHDDTSEDILCAKLHLVDLAGSERAKRTGADGLRFKEGIHINKGLLALGNVISALGDEKKRKEGGHVPYRDSKLTRLLQDSLGGNSKTVMIACVSPADTNAEETLNTLKYANRARNIQNKAIVNRDPATAQIQRMKSQIEQLQSELLFYRGDVGAPYEELQILKHKVSVLEASNAELKQEVLERQITCKHLTQRAIDAQVEKDKLVMKIESARNGKSWDEIDSTSEKDYDLVQNYVSKIQELEAELLHSRNTNGSKINRFHDCMDTDEDKEDCKNVLFPPSDYAFDFEPKSGDFSDEVEDHEKELEHSSLQEKFDKELKELDKKLELKEAEMKRFAGGDASVLKQHYEKKVQELEIEKRTLQREIEVLTCNLANISSTSGDGAQKLKEEYLQKLNVLEAQVSELKKKQDAQSQLVRQKQKSDEAAKRLQDEIQRIKSQKVQLQHKIKQESEQFRLWKASREKEVLQLKKEGRRNEYEMHKLLALNQRQKMVLQRKTEEAALATKRLKDLLESRKAASRETSNFRNGNGSGLQALMQEIEHELEVTVHVHEVRSEYERQMEERGRMAKEAAMLKENNQSDSAQSMSPGARNSRVFALENMLATSSSTLVSMASQLSEAEDRERLFSGRGRWNQVRSLIDAKNIMNFLFDLASSSRCLLRDKEVARREKELEIRELKQKLFNLNSSLRKLEMQKAELIHQNSTLKNYTMNNSSMEPPKNRGFKYDSHKQEIRSSVILLEDMDTSESECSDIDDTTDDDWVDSAKQQAVRKTSKSNRGRSSMAPSSGGNHFLTPALDGFGEGTSRVNSISASGLCCSCSKVSLCKTNKCQCRANGGSCGSSCGCILSKCTNRDGKSEQDVQSQMQDEENGNGSEIDETDRNQGLASHGAMLLQSALADKPVDARRKALSDIGNTLTKSNIPKPNQRKKWSKSTIQLVTDDSSPMQPNNSEAIQSQKPENSTGEVNIPLKLPRAMRSASSNGGGLLRERNLSQIDESVGSKDGGALVPASPVRQKKASDEKENCGL 1273
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7943854 7952321 + Bda005549.1 Bda11g00799 15907

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00799 1273 CDD KISc_KIF4 14 369 - -
Bda11g00799 1273 MobiDBLite consensus disorder prediction 990 1038 - -
Bda11g00799 1273 Coils Coil 638 703 - -
Bda11g00799 1273 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 10 1249 - -
Bda11g00799 1273 MobiDBLite consensus disorder prediction 1105 1133 - -
Bda11g00799 1273 Coils Coil 562 582 - -
Bda11g00799 1273 Coils Coil 376 403 - -
Bda11g00799 1273 PANTHER KINESIN-LIKE PROTEIN KIN-4C 10 1249 - -
Bda11g00799 1273 MobiDBLite consensus disorder prediction 1186 1273 - -
Bda11g00799 1273 ProSiteProfiles Kinesin motor domain profile. 14 368 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bda11g00799 1273 Coils Coil 411 431 - -
Bda11g00799 1273 Pfam Kinesin motor domain 47 368 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bda11g00799 1273 Coils Coil 908 949 - -
Bda11g00799 1273 MobiDBLite consensus disorder prediction 1186 1210 - -
Bda11g00799 1273 SMART CXC_2 1059 1103 IPR033467 -
Bda11g00799 1273 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 402 IPR027417 -
Bda11g00799 1273 Gene3D Kinesin motor domain 9 401 IPR036961 -
Bda11g00799 1273 SMART kinesin_4 12 376 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bda11g00799 1273 Coils Coil 595 629 - -
Bda11g00799 1273 Coils Coil 743 770 - -
Bda11g00799 1273 MobiDBLite consensus disorder prediction 992 1006 - -
Bda11g00799 1273 ProSitePatterns Kinesin motor domain signature. 263 274 IPR019821 GO:0003777|GO:0005524|GO:0007018
Bda11g00799 1273 MobiDBLite consensus disorder prediction 1014 1036 - -
Bda11g00799 1273 PRINTS Kinesin heavy chain signature 222 239 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bda11g00799 1273 PRINTS Kinesin heavy chain signature 84 105 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bda11g00799 1273 PRINTS Kinesin heavy chain signature 264 282 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bda11g00799 1273 PRINTS Kinesin heavy chain signature 318 339 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bda11g00799 1273 Coils Coil 483 503 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00799 - - - zju:107421275 1679.07
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00033 Bda-Chr7:535965 Bda11g00799 Bda-Chr11:7943854 0 dispersed
Bda11g00799 Bda-Chr11:7943854 Bda14g00526 Bda-Chr14:3800337 1.97E-66 dispersed
Bda11g00799 Bda-Chr11:7943854 Bda01g00576 Bda-Chr1:32754377 0 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g515 . . . . Bpe02g00139 . . . . . Cma01g01646 . . . Sed05g1562 . Cpe07g00170 Bhi04g01382 Tan02g2480 Cmetu04g1739 . Hepe10g0431 . Lcy13g1480 . . . . . . . Cone4ag1297 Cone7ag0858 . . Lsi04g02279 Csa03g04492 . . . . Bda11g00799 . . . . . . Cmo01g01696 . . . . . . . . . . . . . . Cla11g01423 Cam11g1479 Cec11g1509 Cco11g1505 Clacu11g1640 Cmu11g1458 Cre11g1876 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009556 2 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 2 1 1 32
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda11g00799 Bda_Chr11 FPKM 357.578125 396.076263 420.166534 417.941589 104.88427 121.183861 102.055946 345.687103 343.122498