Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00826 ATGGCCGTCACTTCCTCCAGTAAGGATGCAAATAAGATATCAATGGACAACGGGAAGTATGTAAGGTACACACCTGAACAAGTGGAAGCCCTAGAGAGGGTTTATTATGAATGCCCCAAACCCAGTTCTATTCGTCGCCAACAGCTTATCAGAGAATGCCCCATTCTATGCAACATCGAGCCCAAGCAAATTAAAGTTTGGTTCCAGAACAGAAGATGTAGAGAGAAGCAACGAAAAGAGTCGTCGCGACTGCAAGCAGTGAACAGGAAGCTAACGGCCATGAATAGGCTTTTAATGGAGGAAAACGATCGTTTGCAGAAACAAGTATCACAGCTGGTGTACGACAACAACTTTTTTCGCCAACAGAATCAAAATGCTACTCTAGCCACCAACGACACAAGCTGTGATTCAGTGGTAACAAGTGGTCAACACCATCAAACTTCTCAGCATCCATTAAAGGATGCCAGCCCTGCAGGACTTTTGTCCATTGCGGAGGAGACTTTAACAGAGTTTATTTCAAAGGCTACTGGAACTGCTGTGGAGTGGGTCCAATTGCCTGGGATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCTATTTCTCCTAGTTCTGTCGGAGTAGCTGCTCGAGCATGCGGCCTTGTTGGCTTAGAACCAACTAGGGTTGTTGAAATCATCAAAGATCGGCCTTTGTGGTTTCGGGATTGCCGAGCAGTAGATGTTCTAAATGTGTTGTCCACAGGAAATGGTGGAACCATTGAACTTCTTTACATGCAGCTCTACTCACCGACAACGCTGGCCCCTGCTCGTGATTTCTGGTTGCTCCGCTACACTTCTGTTTTGGAAGATGGCAGTCTTGTGGTCTGCGAAAGATCACTTAACAATACTCAGAATGGTCCAAGCATGCCACCAGTACAGAATTTCGTGCGAGCCAAAATGCTCCCAAGTGGGTGTTTGATTCGACCATGTGAAGGGGGAGGATCTGTTATCCATATGGTTGATCATATGGATTTGGAGCCTTGGAGCGTGCCTGAAGTGTTACGCCCTCTATACCAGTCGTCTACTCTGCTTGCTCAGAAGACCACCATGGCAGCTTTTCGGCTACTGAGACAGATATCTCAAGAGTTTTCTCAGCCGAATGTCTCCGGATGGGGAAGAAAACCTACTGCTCTGCGTAACCTTAGCCAGAAATTAAGTAGGGGTTTTAACGAAGCCATTAATGGGTTCACAAACGAGGGATGGTCTATGCTAGAATCTGATGGGGTCGATGATGTTACTCTTCTTGTCAACTCATCCCCTACCAAGATGATGGGAGGAGCTCTGTCTTACGCCAATGGCTTCCCATCCGCAGGCTGTGCAGTTCTATGCGCCAAAGCTTCTGTGTTATTCCAAGATGTGCCTCCAGCAATTCTTCTTAGATTTCTTCGAGAAAACCGATCCGAATGGGCAGATAGTAGCATTGATGCTTATTCAGCTGCATCGATTAAAATGAGTCCATGTGTTGCCTTACCTAGTACTCAGCTCGGAGCATATGGCGGGCAGGTTATTCTTCCACTGGCTGACACCATTGAACAAGAAGAGGCAAGTAATATTTGCTTTTTAAGATCGAGCATTTCCATCATTGAATCGCTCACAATCTCACAATATTTTTTCGTGCATTGCCAGCTTTGCAGTGGAGTGGATGAGAATTCTATCGGCACTTGTGCTGAACTCATCTTTTCTCCCATTGATGCCTCCTTTCCCGACGATGCCCCTATTTTATCTTCTGGGTTTCGCATAATTTCTCTTGATTCTATGACGGATGCCTCGAGTCAAAACCGAACGCTTGATCTTACATCAGCTCTTGATGTTGGAAAGGAAGGAAACAAAGGGCTGGGAAATTGTGGTGGACGATACGGAAAATCAAAATCGGTGATGACAATTGCCTTCCAATTTGCGTTTGACGTTCAACTTCAAGAGAATGTGTCGGCCATGGCTAGGCAGTATGTGAGGAGCATTATAGCTTCTGTCCAGCGTGTGGCTGTCGCTCTTTCACCTGCTCATTTTAGCTCTTTGTCGCCTCTTCATTCCCCACCTCAAACTCCCCAAGCTCTCACACTCGCCCGATGGATCTGCCATAGCTACAGGTGTTTTCTAGGGGTGGAACTCCTGAAGATTGAAGAAAGAGATTCTCTTCTGAGAAGCCTTTGGCATCACTCTGACGCAGTTATGTGCTGCTCTTTGAAGGCACTTCCAGTTTTTACATTTGCAAATCAGGCAGGACTAGACATGCTAGAGACAACCTCAATGGCTCTGAATGGCATAACTCTGGAAATGATCTTTGATGACAATGGAAAAAAGACATTTTTCTCTGAGTTCCCCCACATACTGCAGCAGGGTTTTGTCTGTCTTCAAGGCGGTTTCTGCTTGTCTAGCATGGGCCGGCCGGTTTCCTACGACCGAGCAGTGGCTTGGAAGGTGCTGAATGAAGAAGAAAATGTTCAGTGCATCTGCTTCATGTTTATCAACTGGTCTTTTGCTGAAAATTAG 2529 46.22 MAVTSSSKDANKISMDNGKYVRYTPEQVEALERVYYECPKPSSIRRQQLIRECPILCNIEPKQIKVWFQNRRCREKQRKESSRLQAVNRKLTAMNRLLMEENDRLQKQVSQLVYDNNFFRQQNQNATLATNDTSCDSVVTSGQHHQTSQHPLKDASPAGLLSIAEETLTEFISKATGTAVEWVQLPGMKPGPDSIGIVAISPSSVGVAARACGLVGLEPTRVVEIIKDRPLWFRDCRAVDVLNVLSTGNGGTIELLYMQLYSPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSMPPVQNFVRAKMLPSGCLIRPCEGGGSVIHMVDHMDLEPWSVPEVLRPLYQSSTLLAQKTTMAAFRLLRQISQEFSQPNVSGWGRKPTALRNLSQKLSRGFNEAINGFTNEGWSMLESDGVDDVTLLVNSSPTKMMGGALSYANGFPSAGCAVLCAKASVLFQDVPPAILLRFLRENRSEWADSSIDAYSAASIKMSPCVALPSTQLGAYGGQVILPLADTIEQEEASNICFLRSSISIIESLTISQYFFVHCQLCSGVDENSIGTCAELIFSPIDASFPDDAPILSSGFRIISLDSMTDASSQNRTLDLTSALDVGKEGNKGLGNCGGRYGKSKSVMTIAFQFAFDVQLQENVSAMARQYVRSIIASVQRVAVALSPAHFSSLSPLHSPPQTPQALTLARWICHSYRCFLGVELLKIEERDSLLRSLWHHSDAVMCCSLKALPVFTFANQAGLDMLETTSMALNGITLEMIFDDNGKKTFFSEFPHILQQGFVCLQGGFCLSSMGRPVSYDRAVAWKVLNEEENVQCICFMFINWSFAEN 842
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8184574 8189246 - Bda005577.1 Bda11g00826 15934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00826 842 SUPERFAMILY Homeodomain-like 18 80 IPR009057 -
Bda11g00826 842 ProSiteProfiles 'Homeobox' domain profile. 14 78 IPR001356 GO:0003677
Bda11g00826 842 Pfam Homeodomain 19 77 IPR001356 GO:0003677
Bda11g00826 842 SMART HOX_1 16 82 IPR001356 GO:0003677
Bda11g00826 842 CDD bZIP 71 110 - -
Bda11g00826 842 CDD homeodomain 19 79 IPR001356 GO:0003677
Bda11g00826 842 CDD START_ArGLABRA2_like 157 372 - -
Bda11g00826 842 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 6 839 IPR044830 GO:0003700
Bda11g00826 842 SUPERFAMILY Bet v1-like 162 372 - -
Bda11g00826 842 SMART START_1 162 372 IPR002913 GO:0008289
Bda11g00826 842 Gene3D - 11 85 - -
Bda11g00826 842 Pfam MEKHLA domain 699 839 IPR013978 -
Bda11g00826 842 PANTHER CLASS III HD-ZIP PROTEIN CNA1 6 839 - -
Bda11g00826 842 Gene3D - 198 367 IPR023393 -
Bda11g00826 842 ProSiteProfiles START domain profile. 153 381 IPR002913 GO:0008289
Bda11g00826 842 Pfam START domain 163 371 IPR002913 GO:0008289
Bda11g00826 842 Coils Coil 84 108 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda10g00831 Bda-Chr10:42695627 Bda11g00826 Bda-Chr11:8184574 0 dispersed
Bda11g00826 Bda-Chr11:8184574 Bda05g00570 Bda-Chr5:53579833 1.39E-23 dispersed
Bda11g00826 Bda-Chr11:8184574 Bda03g00434 Bda-Chr3:3749638 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16625 PF01852 START 2.30E-51 CL0209 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00826 K09338 - tcc:18587987 1313.9