Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00846 ATGGCAGACTCCTCGAAGAGCAACCCATTTTCTGTCTCTTCTACTTCGCGTAACCCTTTTCATTTCTCGCCCGAATCTCCTCCCCGGATCGCTGTCTCGCCCGATCAGATCAAATTCTGCTCTGACGCTCTGAGGTTATTCAGGGAGAAGCTCCGGACGCCTCACACTATTTCGGAAGAGTTTATGAACTTGCAGGCCTATAGAATCACGTTGCCTACCATGCAAAGAAGTTGCACTGTGGCTCTTGATAGCGTCAACTTGAGCAAAAACCGCTACACCGATGTCGTACCATTTGACAGTACTAGAGTGGTACTCAACTCATGTAGAGATTACAGACCTTCTGCAAGGGGCTACATTAATGCGAGCTTTGTCTCGACTTCTTCGTCAGACAACGCTTCTAAGTTCATAGCCACACAAGGTCCTCTACCACATACATATGAAGATTTTTGGGAGATGGTAATTCAGTACCGTTGTCCCGTGGTTGTGATGCTTACCAAATTAGTTGACAATTACAAGTTTGTGAAATGTGGAGACTATTTCCAGGCAGAAGATGGTCCGAGAGACTTTGGCAATATATCTATTATCACCAAATCGATAGACACTTCTGACATTTCTTTAGTGTTGCGTCAATTAGAGGTCAAACATAAAGAGTCGGAAGAGGAACCTTTGTCGGTTTTGCATATTCAGTACCCTGAATGGCCTGACCATGGAGTTCCGGAGGACACAAAGGCCGTTCGAGAAATATTTAAACGAATATATCAAGTGCCTTCAAATCTAGGCCCAATAGTGGTTCATTGCAGTGCAGGTATTGGAAGAACTGGAGCATACTGCACTATACATAATACAATCCAAAGAATTCTTTCAGGAGACATGTCTGCTTTAGATCTTGCTAAAACCATTACTTGTTTTAGATCGCAGCGAATTGGAATGGTTCAAACTCTGGAACAATACCATTTCTGCTACAGAGCTATTGTTCATGAGTTGGAGGATCTGACCTCAGTAGCCTGCTCCATGGCTAGTCAATGA 1026 43.86 MADSSKSNPFSVSSTSRNPFHFSPESPPRIAVSPDQIKFCSDALRLFREKLRTPHTISEEFMNLQAYRITLPTMQRSCTVALDSVNLSKNRYTDVVPFDSTRVVLNSCRDYRPSARGYINASFVSTSSSDNASKFIATQGPLPHTYEDFWEMVIQYRCPVVVMLTKLVDNYKFVKCGDYFQAEDGPRDFGNISIITKSIDTSDISLVLRQLEVKHKESEEEPLSVLHIQYPEWPDHGVPEDTKAVREIFKRIYQVPSNLGPIVVHCSAGIGRTGAYCTIHNTIQRILSGDMSALDLAKTITCFRSQRIGMVQTLEQYHFCYRAIVHELEDLTSVACSMASQ 341
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8339508 8342425 - Bda005597.2 Bda11g00846 15954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00846 341 SMART PTPc_3 56 329 IPR000242 GO:0004725|GO:0006470
Bda11g00846 341 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 246 318 IPR000387 GO:0016311|GO:0016791
Bda11g00846 341 SMART ptp_7 224 326 IPR003595 -
Bda11g00846 341 PANTHER RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE 5 333 - -
Bda11g00846 341 MobiDBLite consensus disorder prediction 1 22 - -
Bda11g00846 341 ProSiteProfiles PTP type protein phosphatase domain profile. 57 327 IPR000242 GO:0004725|GO:0006470
Bda11g00846 341 Pfam Protein-tyrosine phosphatase 86 325 IPR000242 GO:0004725|GO:0006470
Bda11g00846 341 PRINTS Protein tyrosine phosphatase signature 310 320 IPR000242 GO:0004725|GO:0006470
Bda11g00846 341 PRINTS Protein tyrosine phosphatase signature 223 240 IPR000242 GO:0004725|GO:0006470
Bda11g00846 341 PRINTS Protein tyrosine phosphatase signature 261 279 IPR000242 GO:0004725|GO:0006470
Bda11g00846 341 PRINTS Protein tyrosine phosphatase signature 135 155 IPR000242 GO:0004725|GO:0006470
Bda11g00846 341 PRINTS Protein tyrosine phosphatase signature 294 309 IPR000242 GO:0004725|GO:0006470
Bda11g00846 341 PRINTS Protein tyrosine phosphatase signature 117 124 IPR000242 GO:0004725|GO:0006470
Bda11g00846 341 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 44 329 IPR029021 -
Bda11g00846 341 CDD PTPc_plant_PTP1 118 321 - -
Bda11g00846 341 ProSitePatterns Tyrosine specific protein phosphatases active site. 264 274 IPR016130 GO:0016311|GO:0016791
Bda11g00846 341 Gene3D Protein tyrosine phosphatase superfamily 35 330 IPR029021 -
Bda11g00846 341 PANTHER PROTEIN-TYROSINE-PHOSPHATASE PTP1 5 333 - -
Bda11g00846 341 MobiDBLite consensus disorder prediction 1 29 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00846 - - mnt:21399479 513.457