Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00853 ATGGAGCAAGGCCAGGTTTGGAATCTGGCTTGTATATGCTTGATCTTGCTGCTTCGTCCCTTATGGCTGATTTCTGCTAACATGGAAGGAGATGCCCTTCACAGCCTTAGAAGCAGCTTGCAGGATCCCAACAATGTACTTCAGAGTTGGGATCCTACCCTTGTCAATCCCTGCACTTGGTTTCATGTTACATGCGACAATGATAATAGTGTTATAAGAGTTGATCTTGGAAATGCAGCTTTATCTGGGCAACTTGTTCCACAACTGGGCCTATTAAAGAACTTGCAGTATCTGGAACTTTACAGTAATAACATTAGCGGGATAATTCCTACTGACCTTGGGAATCTGACTAGTTTGGTGAGCTTGGATCTTTACTTGAATAACTTTACGGGTCCTATTCCTGAGACATTGGGGAAGCTGTCTAAATTGCGATTCCTCCGGCTCAACAACAACAGCTTGTCTGGTCCCATTCCAATGTCATTGACTAATATTTCTTCCCTTCAAGTGTTAGATCTGTCAAACAACCATTTATCAGGAGTTGTTCCAGACAATGGTTCTTTCTCCCTGTTCACTCCCATCAGTTTTGCTAACAATTTGGATCTATGCGGTCCTGTTACTGGACATCCTTGCCCGGGATCTCCTCCATTCTCTCCTCCTCCCCCATTTGTTCCACCACCTCCAATTTCTACACCAGGGGGAAATAGTGCAACTGGGGCAATTGCCGGTGGAGTTGCTGCAGGTGCAGCCTTACTTTTTGCTGCTCCTGCAATTGCATTTGCATGGCGGCGTCGAAGAAAACCGCAAGAATATTTCTTTGATGTACCAGGTTTGTACTTTAAGCCGAGGAGGACCCTGAAGTTCATCTTGGACAGCTTAAAAGGTTCTCTTTGCGAGAATTACAAGTTGCAACTGATAGTTTTAGTAATAAAAACATTCTGGGTAGGGGTGGATTTGGTAAAGTTTACAAAGGTCGCTTAG 978 44.27 MEQGQVWNLACICLILLLRPLWLISANMEGDALHSLRSSLQDPNNVLQSWDPTLVNPCTWFHVTCDNDNSVIRVDLGNAALSGQLVPQLGLLKNLQYLELYSNNISGIIPTDLGNLTSLVSLDLYLNNFTGPIPETLGKLSKLRFLRLNNNSLSGPIPMSLTNISSLQVLDLSNNHLSGVVPDNGSFSLFTPISFANNLDLCGPVTGHPCPGSPPFSPPPPFVPPPPISTPGGNSATGAIAGGVAAGAALLFAAPAIAFAWRRRRKPQEYFFDVPGLYFKPRRTLKFILDSLKGSLCENYKLQLIVLVIKTFWVGVDLVKFTKVA 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8396251 8399434 - Bda005604.1 Bda11g00853 15961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00853 325 PANTHER LEUCINE-RICH REPEAT DOMAIN, L DOMAIN-LIKE PROTEIN-RELATED 9 276 IPR031048 GO:0004675|GO:0005102|GO:0006468
Bda11g00853 325 Gene3D Ribonuclease Inhibitor 25 212 IPR032675 -
Bda11g00853 325 SUPERFAMILY L domain-like 29 191 - -
Bda11g00853 325 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 9 276 - -
Bda11g00853 325 Pfam Leucine Rich Repeat 94 116 IPR001611 GO:0005515
Bda11g00853 325 Pfam Leucine Rich Repeat 166 183 IPR001611 GO:0005515
Bda11g00853 325 SMART LRR_typ_2 164 189 IPR003591 -
Bda11g00853 325 SMART LRR_typ_2 92 115 IPR003591 -
Bda11g00853 325 SMART LRR_typ_2 116 140 IPR003591 -
Bda11g00853 325 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda03g00411 Bda11g00853 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g00853 Bda-Chr11:8396251 Bda06g01102 Bda-Chr6:39196892 1.52E-94 dispersed
Bda11g00820 Bda-Chr11:8127080 Bda11g00853 Bda-Chr11:8396251 5.13E-166 transposed
Bda11g00853 Bda-Chr11:8396251 Bda03g00411 Bda-Chr3:3543626 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00853 K13418 - csv:101208695 415.616