Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00865 ATGGGTTGTGTTCAGTCCAAGTCTTCTGAGAACTCACCATCACGGAGCTTGGAGAAGCTGAAATCGGAAAACGGATATTCTGGGAAACCGGAGCTTATCGGCAAGAGAAGATCGTCCAAACCGCAAACTATCCAAAAAGATCCTAATAAGCCTCAGAGACGCCAACCCAGAAACTATAATGGCTTCGATAATGTCCTGAAAGACGGCGAAAAAGGTAAGAATCAAACTGGTTCTGAGAGAGTTTTATCTAAATCTCTTGGAGAAGACGAACTGATTAATGGATGGCCAAAATGGTTGGCTGATAATGTTCCTAGTGAAGTTCTCGCTGGGGTGGTTCAAAAAACTGCTGATTCCTATGATAAACTTGCTAAGGTAGGCCAAGGAACTTATAGTAATGTGTACAAAGCTCGAGATCGAGACACTGGAAAAATTGTCGCGCTGAAGAAGGTTCGAGTTGACATATCCGAACCGGAGAGCATTAAATTCATGGCAAGAGAGATCATGATATTGCAGAAATTGGATCATCCCAATGTCATCAAACTCAAAGGGTTGGCCACGTCAAGAATGCAATGGAGTCTTTATCTGGTTTTCGATTTCATGCAGACTGATTTATCGAGGGTCATTTCCCGCCCCGAATCTAGACTCACCGAGCCGCAGATCAAATGCTATATGCAACATTTAATGTCTGGTTTACGGCATTGTCACGACAAGGGAATATTACACCGAGATATCAAAGCGTCAAACCTTCTTATTGATAAAAATGGAATGCTAAAAATTGCAGATTTCGGCCTCGCCAATTACTTTCATCCAAAACCGAAGCGTTGTCTCACAAATCGGGTTGTGACCCTTTGGTATAGAGCCCCTGAGCTGTTATTAGGCAGTACAGATTATGGAGTTGGGATTGATCTTTGGAGTGCAGGATGCCTATTGGCCGAAATGTTCACTGGCAAACCGATACTTCCCGGTCGAACAGAAGTAATTGTTACAAATCAGCCCGAAAATCTTTCTGTTTCGTGTTGTAATCGAGCATTTGATGATTTAGTATTTGATTGGATTTAG 1059 42.49 MGCVQSKSSENSPSRSLEKLKSENGYSGKPELIGKRRSSKPQTIQKDPNKPQRRQPRNYNGFDNVLKDGEKGKNQTGSERVLSKSLGEDELINGWPKWLADNVPSEVLAGVVQKTADSYDKLAKVGQGTYSNVYKARDRDTGKIVALKKVRVDISEPESIKFMAREIMILQKLDHPNVIKLKGLATSRMQWSLYLVFDFMQTDLSRVISRPESRLTEPQIKCYMQHLMSGLRHCHDKGILHRDIKASNLLIDKNGMLKIADFGLANYFHPKPKRCLTNRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFTGKPILPGRTEVIVTNQPENLSVSCCNRAFDDLVFDWI 352
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8516932 8518213 + Bda005617.1 Bda11g00865 15973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00865 352 MobiDBLite consensus disorder prediction 1 82 - -
Bda11g00865 352 MobiDBLite consensus disorder prediction 44 59 - -
Bda11g00865 352 PANTHER CELL DIVISION PROTEIN KINASE 67 326 - -
Bda11g00865 352 Gene3D Transferase(Phosphotransferase) domain 1 202 348 - -
Bda11g00865 352 SMART serkin_6 119 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g00865 352 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
Bda11g00865 352 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Bda11g00865 352 SUPERFAMILY Protein kinase-like (PK-like) 114 330 IPR011009 -
Bda11g00865 352 Pfam Protein kinase domain 119 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g00865 352 PANTHER CYCLIN-DEPENDENT KINASE 67 326 - -
Bda11g00865 352 ProSiteProfiles Protein kinase domain profile. 119 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g00865 352 Gene3D Phosphorylase Kinase; domain 1 108 201 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g00865 Bda-Chr11:8516932 Bda14g01181 Bda-Chr14:11570470 9.26E-118 dispersed
Bda11g00865 Bda-Chr11:8516932 Bda13g00161 Bda-Chr13:2092316 1.19E-112 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69910 PF00069 Pkinase 8.60E-64 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00865 K08819 - pop:7456281 467.233