Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00876 ATGCTGGGCGACTCGAGTGTCAGCTCCGGTGACGCCACGCTTCCTGTTCCGCCGTTGCTGCTGCCTCACGGTCACGATGCCGCCTCCGATGCTGGAGGCGCTGCAGCTTCCAATTCGGCTGAAGAGGATAGAGGGAGAGGCGGGGATGAAGGGGAACGGAGTTTCGGCGGTAATAGGTGGCCGAGACAAGAGACCTTAGCTCTTTTGAAGATTCGCTCCGATATGGATGTTGCTTTCCGAGATGCAAGCGTTAAGGGTCCATTGTGGGAAGAAGTTTCCAGCTCTTATTCTTCCATGGCATCCATTCTCTCTCTTCTTCTCCATCTTATTCTTCATGTTTCACTAAAATCGCTAGAGTTTTTATGGGTCTTCAGATTTTCTGGCATTTTGCTTCTTCCATTACAGCTAATGAGGGAGAAACTCTCAGAGCTTGGATATCATCGAAGCTCCAAAAAATGCAAAGAGAAATTCGAAAACGTTTACAAATATCACAAAAGAACTAGAGAAGGGAGAAGCGGAAAACCAGATGGAAAAACCTACAGATTTTTCGATCAACTAGAAGCACTGGAAAGTCAGTTTCCTTCGTTACAGTCCCCGTCTTCTTCGCAGCAACCTAGACCTCAAGGTTCAATGGCTGCTACAACAATGGCTCAGACGATCACTGTTACTAACCCTCAAACAATGTCTCAAAGCTCTACTGTTCCATCAATGGCGGTTCATCACTTAATGGGTATGTCTTCAACGGTTCCTTCGTTTCAACATGGCAACCCGGCTATTTTTCCTCCGCCTTCTCAACCAAACCCTACAAATAATCCATTTCAAGCCGCCATTTCATCCTCTTTTCAGAACGTCGCCGCCGATCTTATTTCGAATTCTTCTTCTTCGTCAACCTCGTCGGATGAAAAATTGGAGAGCCGAAGGAGAAGAAAGAGGAAATGGAAGGACTTTTTCGAGAAGTTAATGAAGGAGGTGATGCATAAGCAAGAAGAGCAGCAGAAAAAATTCTTGGAAGCCGTGGAGAAACGCGAACATGAAAGAATGGTTAGAGAAGAAGCTTGGAGGGCTCAGGAAATGGCGAAAATCAATAGGGAGAGAGAAATTCTCTCTCAAGAACGATCAATGGCTGCAGCTAAAGATGCTGCACTAATTTCGTTTCTACAGAAGATATCCGAACAGCAAAGCCAAAACCCTGGCCCAATTTTGAATTTCAGTCCTCCCCCATTGCAGCCGCTGCCTCCAGCTCCGCCTCCGCAATCTGCGGCACCTCCTCCCCGATCTTTACAGTCGCCTGCAACGCCTTCAGGCCCACCAGGACCACTAGCAGTGCAACGGGCATCGACGGAATTAATCGAAGCAACACCTAAAACTGATAATGGCGACAATTACGAAGCGGCAACTTCTTCAAGATGGCCCAAAGTGGAAGTTGAAGCTCTGATAAGTTTACGTACAAATCTTGATTCTAAGTATCAAGAAAGTGGGCCAAAAGGGCCATTGTGGGAGGAGATCTCAGCCGCCATGCGAAAACTTGGATATAATCGAAATGCAAAGAGGTGTAAAGAGAAATGGGAGAACATCAACAAATACTTCAAAAAAGTGAAGGAAAGCCACAAGAAAAGATCCGAGGATTCAAAAACATGCCCCTATTTTCACCAGCTCGACGCATTGTACAGAGAAAAAAACAAGTTTGATAGTTCGTCGTCAAACTTATTCAGGCCTGACAGTTCAATTGTGCCGCTAATGGTCCGACCTGAGCAGCAATGGCCTCCCCAAACGCGACCTGACTCCGGCAATGCCGACATGGAAATCGAGCCAATGGATCAACGCCAGGACAATGATGACAAAGAAAGAGAAGACGAGGAAGAAGATGATGAAAGTGGTGGAAATTACGAAATTGTCGCAAGCAAACCAGCTTCACTGGGCGCAACCGGGTAA 1932 46.64 MLGDSSVSSGDATLPVPPLLLPHGHDAASDAGGAAASNSAEEDRGRGGDEGERSFGGNRWPRQETLALLKIRSDMDVAFRDASVKGPLWEEVSSSYSSMASILSLLLHLILHVSLKSLEFLWVFRFSGILLLPLQLMREKLSELGYHRSSKKCKEKFENVYKYHKRTREGRSGKPDGKTYRFFDQLEALESQFPSLQSPSSSQQPRPQGSMAATTMAQTITVTNPQTMSQSSTVPSMAVHHLMGMSSTVPSFQHGNPAIFPPPSQPNPTNNPFQAAISSSFQNVAADLISNSSSSSTSSDEKLESRRRRKRKWKDFFEKLMKEVMHKQEEQQKKFLEAVEKREHERMVREEAWRAQEMAKINREREILSQERSMAAAKDAALISFLQKISEQQSQNPGPILNFSPPPLQPLPPAPPPQSAAPPPRSLQSPATPSGPPGPLAVQRASTELIEATPKTDNGDNYEAATSSRWPKVEVEALISLRTNLDSKYQESGPKGPLWEEISAAMRKLGYNRNAKRCKEKWENINKYFKKVKESHKKRSEDSKTCPYFHQLDALYREKNKFDSSSSNLFRPDSSIVPLMVRPEQQWPPQTRPDSGNADMEIEPMDQRQDNDDKEREDEEEDDESGGNYEIVASKPASLGATG 643
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8614273 8616667 - Bda005629.1 Bda11g00876 15984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00876 643 MobiDBLite consensus disorder prediction 290 309 - -
Bda11g00876 643 MobiDBLite consensus disorder prediction 42 57 - -
Bda11g00876 643 Gene3D - 470 531 - -
Bda11g00876 643 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 27 94 - -
Bda11g00876 643 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 140 634 - -
Bda11g00876 643 PANTHER - 27 94 - -
Bda11g00876 643 PANTHER - 140 634 - -
Bda11g00876 643 MobiDBLite consensus disorder prediction 400 437 - -
Bda11g00876 643 MobiDBLite consensus disorder prediction 194 213 - -
Bda11g00876 643 Gene3D - 60 166 - -
Bda11g00876 643 MobiDBLite consensus disorder prediction 449 465 - -
Bda11g00876 643 ProSiteProfiles Myb-like domain profile. 462 526 IPR001005 -
Bda11g00876 643 CDD GT1 58 168 - -
Bda11g00876 643 MobiDBLite consensus disorder prediction 562 643 - -
Bda11g00876 643 Pfam Myb/SANT-like DNA-binding domain 468 555 IPR044822 -
Bda11g00876 643 Pfam Myb/SANT-like DNA-binding domain 137 189 IPR044822 -
Bda11g00876 643 MobiDBLite consensus disorder prediction 613 627 - -
Bda11g00876 643 CDD GT1 468 533 - -
Bda11g00876 643 SMART sant 466 528 IPR001005 -
Bda11g00876 643 MobiDBLite consensus disorder prediction 1 58 - -
Bda11g00876 643 MobiDBLite consensus disorder prediction 253 275 - -
Bda11g00876 643 MobiDBLite consensus disorder prediction 393 467 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda03g00390 Bda11g00876 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00390 Bda-Chr3:3228468 Bda11g00876 Bda-Chr11:8614273 1.59E-139 dispersed
Bda03g01683 Bda-Chr3:56217197 Bda11g00876 Bda-Chr11:8614273 1.03E-20 dispersed
Bda07g00837 Bda-Chr7:9830244 Bda11g00876 Bda-Chr11:8614273 3.71E-15 dispersed
Bda08g00593 Bda-Chr8:6053329 Bda11g00876 Bda-Chr11:8614273 9.75E-08 dispersed
Bda11g00876 Bda-Chr11:8614273 Bda12g00376 Bda-Chr12:4344493 2.73E-11 dispersed
Bda15g00661 Bda-Chr15:10101812 Bda11g00876 Bda-Chr11:8614273 1.21E-06 dispersed
Bda11g00875 Bda-Chr11:8606211 Bda11g00876 Bda-Chr11:8614273 7.07E-148 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16634 PF13837 Myb_DNA-bind_4 1.00E-21 CL0123 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00876 - - jre:109011419 605.905