Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda11g00876 | ATGCTGGGCGACTCGAGTGTCAGCTCCGGTGACGCCACGCTTCCTGTTCCGCCGTTGCTGCTGCCTCACGGTCACGATGCCGCCTCCGATGCTGGAGGCGCTGCAGCTTCCAATTCGGCTGAAGAGGATAGAGGGAGAGGCGGGGATGAAGGGGAACGGAGTTTCGGCGGTAATAGGTGGCCGAGACAAGAGACCTTAGCTCTTTTGAAGATTCGCTCCGATATGGATGTTGCTTTCCGAGATGCAAGCGTTAAGGGTCCATTGTGGGAAGAAGTTTCCAGCTCTTATTCTTCCATGGCATCCATTCTCTCTCTTCTTCTCCATCTTATTCTTCATGTTTCACTAAAATCGCTAGAGTTTTTATGGGTCTTCAGATTTTCTGGCATTTTGCTTCTTCCATTACAGCTAATGAGGGAGAAACTCTCAGAGCTTGGATATCATCGAAGCTCCAAAAAATGCAAAGAGAAATTCGAAAACGTTTACAAATATCACAAAAGAACTAGAGAAGGGAGAAGCGGAAAACCAGATGGAAAAACCTACAGATTTTTCGATCAACTAGAAGCACTGGAAAGTCAGTTTCCTTCGTTACAGTCCCCGTCTTCTTCGCAGCAACCTAGACCTCAAGGTTCAATGGCTGCTACAACAATGGCTCAGACGATCACTGTTACTAACCCTCAAACAATGTCTCAAAGCTCTACTGTTCCATCAATGGCGGTTCATCACTTAATGGGTATGTCTTCAACGGTTCCTTCGTTTCAACATGGCAACCCGGCTATTTTTCCTCCGCCTTCTCAACCAAACCCTACAAATAATCCATTTCAAGCCGCCATTTCATCCTCTTTTCAGAACGTCGCCGCCGATCTTATTTCGAATTCTTCTTCTTCGTCAACCTCGTCGGATGAAAAATTGGAGAGCCGAAGGAGAAGAAAGAGGAAATGGAAGGACTTTTTCGAGAAGTTAATGAAGGAGGTGATGCATAAGCAAGAAGAGCAGCAGAAAAAATTCTTGGAAGCCGTGGAGAAACGCGAACATGAAAGAATGGTTAGAGAAGAAGCTTGGAGGGCTCAGGAAATGGCGAAAATCAATAGGGAGAGAGAAATTCTCTCTCAAGAACGATCAATGGCTGCAGCTAAAGATGCTGCACTAATTTCGTTTCTACAGAAGATATCCGAACAGCAAAGCCAAAACCCTGGCCCAATTTTGAATTTCAGTCCTCCCCCATTGCAGCCGCTGCCTCCAGCTCCGCCTCCGCAATCTGCGGCACCTCCTCCCCGATCTTTACAGTCGCCTGCAACGCCTTCAGGCCCACCAGGACCACTAGCAGTGCAACGGGCATCGACGGAATTAATCGAAGCAACACCTAAAACTGATAATGGCGACAATTACGAAGCGGCAACTTCTTCAAGATGGCCCAAAGTGGAAGTTGAAGCTCTGATAAGTTTACGTACAAATCTTGATTCTAAGTATCAAGAAAGTGGGCCAAAAGGGCCATTGTGGGAGGAGATCTCAGCCGCCATGCGAAAACTTGGATATAATCGAAATGCAAAGAGGTGTAAAGAGAAATGGGAGAACATCAACAAATACTTCAAAAAAGTGAAGGAAAGCCACAAGAAAAGATCCGAGGATTCAAAAACATGCCCCTATTTTCACCAGCTCGACGCATTGTACAGAGAAAAAAACAAGTTTGATAGTTCGTCGTCAAACTTATTCAGGCCTGACAGTTCAATTGTGCCGCTAATGGTCCGACCTGAGCAGCAATGGCCTCCCCAAACGCGACCTGACTCCGGCAATGCCGACATGGAAATCGAGCCAATGGATCAACGCCAGGACAATGATGACAAAGAAAGAGAAGACGAGGAAGAAGATGATGAAAGTGGTGGAAATTACGAAATTGTCGCAAGCAAACCAGCTTCACTGGGCGCAACCGGGTAA | 1932 | 46.64 | MLGDSSVSSGDATLPVPPLLLPHGHDAASDAGGAAASNSAEEDRGRGGDEGERSFGGNRWPRQETLALLKIRSDMDVAFRDASVKGPLWEEVSSSYSSMASILSLLLHLILHVSLKSLEFLWVFRFSGILLLPLQLMREKLSELGYHRSSKKCKEKFENVYKYHKRTREGRSGKPDGKTYRFFDQLEALESQFPSLQSPSSSQQPRPQGSMAATTMAQTITVTNPQTMSQSSTVPSMAVHHLMGMSSTVPSFQHGNPAIFPPPSQPNPTNNPFQAAISSSFQNVAADLISNSSSSSTSSDEKLESRRRRKRKWKDFFEKLMKEVMHKQEEQQKKFLEAVEKREHERMVREEAWRAQEMAKINREREILSQERSMAAAKDAALISFLQKISEQQSQNPGPILNFSPPPLQPLPPAPPPQSAAPPPRSLQSPATPSGPPGPLAVQRASTELIEATPKTDNGDNYEAATSSRWPKVEVEALISLRTNLDSKYQESGPKGPLWEEISAAMRKLGYNRNAKRCKEKWENINKYFKKVKESHKKRSEDSKTCPYFHQLDALYREKNKFDSSSSNLFRPDSSIVPLMVRPEQQWPPQTRPDSGNADMEIEPMDQRQDNDDKEREDEEEDDESGGNYEIVASKPASLGATG | 643 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 8614273 | 8616667 | - | Bda005629.1 | Bda11g00876 | 15984 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda11g00876 | 643 | MobiDBLite | consensus disorder prediction | 290 | 309 | - | - | |
Bda11g00876 | 643 | MobiDBLite | consensus disorder prediction | 42 | 57 | - | - | |
Bda11g00876 | 643 | Gene3D | - | 470 | 531 | - | - | |
Bda11g00876 | 643 | PANTHER | DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN | 27 | 94 | - | - | |
Bda11g00876 | 643 | PANTHER | DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN | 140 | 634 | - | - | |
Bda11g00876 | 643 | PANTHER | - | 27 | 94 | - | - | |
Bda11g00876 | 643 | PANTHER | - | 140 | 634 | - | - | |
Bda11g00876 | 643 | MobiDBLite | consensus disorder prediction | 400 | 437 | - | - | |
Bda11g00876 | 643 | MobiDBLite | consensus disorder prediction | 194 | 213 | - | - | |
Bda11g00876 | 643 | Gene3D | - | 60 | 166 | - | - | |
Bda11g00876 | 643 | MobiDBLite | consensus disorder prediction | 449 | 465 | - | - | |
Bda11g00876 | 643 | ProSiteProfiles | Myb-like domain profile. | 462 | 526 | IPR001005 | - | |
Bda11g00876 | 643 | CDD | GT1 | 58 | 168 | - | - | |
Bda11g00876 | 643 | MobiDBLite | consensus disorder prediction | 562 | 643 | - | - | |
Bda11g00876 | 643 | Pfam | Myb/SANT-like DNA-binding domain | 468 | 555 | IPR044822 | - | |
Bda11g00876 | 643 | Pfam | Myb/SANT-like DNA-binding domain | 137 | 189 | IPR044822 | - | |
Bda11g00876 | 643 | MobiDBLite | consensus disorder prediction | 613 | 627 | - | - | |
Bda11g00876 | 643 | CDD | GT1 | 468 | 533 | - | - | |
Bda11g00876 | 643 | SMART | sant | 466 | 528 | IPR001005 | - | |
Bda11g00876 | 643 | MobiDBLite | consensus disorder prediction | 1 | 58 | - | - | |
Bda11g00876 | 643 | MobiDBLite | consensus disorder prediction | 253 | 275 | - | - | |
Bda11g00876 | 643 | MobiDBLite | consensus disorder prediction | 393 | 467 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda03g00390 | Bda11g00876 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda03g00390 | Bda-Chr3:3228468 | Bda11g00876 | Bda-Chr11:8614273 | 1.59E-139 | dispersed | |
Bda03g01683 | Bda-Chr3:56217197 | Bda11g00876 | Bda-Chr11:8614273 | 1.03E-20 | dispersed | |
Bda07g00837 | Bda-Chr7:9830244 | Bda11g00876 | Bda-Chr11:8614273 | 3.71E-15 | dispersed | |
Bda08g00593 | Bda-Chr8:6053329 | Bda11g00876 | Bda-Chr11:8614273 | 9.75E-08 | dispersed | |
Bda11g00876 | Bda-Chr11:8614273 | Bda12g00376 | Bda-Chr12:4344493 | 2.73E-11 | dispersed | |
Bda15g00661 | Bda-Chr15:10101812 | Bda11g00876 | Bda-Chr11:8614273 | 1.21E-06 | dispersed | |
Bda11g00875 | Bda-Chr11:8606211 | Bda11g00876 | Bda-Chr11:8614273 | 7.07E-148 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16634 | PF13837 | Myb_DNA-bind_4 | 1.00E-21 | CL0123 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda11g00876 | - | - | jre:109011419 | 605.905 |